Gene annotation
Transcriptome id Sobic.003G058001.1
Synonym -
Functional annotation -
UniProt A0A1W0VVW6
Pfam PF00560 PF08263 PF13855
Panther DB PTHR27004 PTHR27004:SF20
NCBI CDD KOG0472; Leucine-rich repeat protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G47890 : receptor like protein 7
RAP-DB (Rice) LOC_Os01g06730.1 : verticillium wilt disease resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167500 resistance protein, putative, expressed -
2 Sobic.010G157000 - -
3 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
4 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
5 Sobic.004G210601 - -
6 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
7 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
8 Sobic.010G100200 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
9 Sobic.009G202400 expressed protein -
10 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
11 Sobic.001G338700 tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
12 Sobic.003G131000 expressed protein -
13 Sobic.005G015200 Phototropic-responsive NPH3 family protein(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
14 Sobic.008G036350 - -
15 Sobic.003G097800 - -
16 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
17 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
18 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
19 Sobic.005G217900 carboxyl-terminal peptidase, putative, expressed -
20 Sobic.006G180800 - -


Gene co-expression network
sample Sobic003G058001 Sobic003G058001 Sobic005G167500 Sobic005G167500 Sobic003G058001--Sobic005G167500 Sobic010G157000 Sobic010G157000 Sobic003G058001--Sobic010G157000 Sobic008G036300 Sobic008G036300 Sobic003G058001--Sobic008G036300 Sobic004G182700 Sobic004G182700 Sobic003G058001--Sobic004G182700 Sobic004G210601 Sobic004G210601 Sobic003G058001--Sobic004G210601 Sobic005G065500 Sobic005G065500 Sobic003G058001--Sobic005G065500 Sobic005G192600 Sobic005G192600 Sobic003G058001--Sobic005G192600 Sobic010G100200 Sobic010G100200 Sobic003G058001--Sobic010G100200 Sobic009G202400 Sobic009G202400 Sobic003G058001--Sobic009G202400 Sobic005G167500--Sobic008G036300 Sobic005G167500--Sobic003G058001 Sobic005G167500--Sobic004G182700 Sobic005G167500--Sobic005G192600 Sobic008G036350 Sobic008G036350 Sobic005G167500--Sobic008G036350 Sobic005G167500--Sobic004G210601 Sobic001G198800 Sobic001G198800 Sobic005G167500--Sobic001G198800 Sobic005G167500--Sobic005G065500 Sobic005G167500--Sobic009G202400 Sobic010G157000--Sobic003G058001 Sobic010G157000--Sobic005G065500 Sobic010G157000--Sobic005G167500 Sobic010G157000--Sobic004G210601 Sobic002G195300 Sobic002G195300 Sobic010G157000--Sobic002G195300 Sobic010G038500 Sobic010G038500 Sobic010G157000--Sobic010G038500 Sobic005G217900 Sobic005G217900 Sobic010G157000--Sobic005G217900 Sobic010G157000--Sobic010G100200 Sobic001G098600 Sobic001G098600 Sobic010G157000--Sobic001G098600 Sobic008G036300--Sobic005G167500 Sobic008G036300--Sobic004G182700 Sobic008G036300--Sobic005G192600 Sobic008G036300--Sobic008G036350 Sobic008G036300--Sobic001G198800 Sobic008G080400 Sobic008G080400 Sobic008G036300--Sobic008G080400 Sobic008G036300--Sobic003G058001 Sobic001G338700 Sobic001G338700 Sobic008G036300--Sobic001G338700 Sobic008G080600 Sobic008G080600 Sobic008G036300--Sobic008G080600 Sobic004G182700--Sobic008G036300 Sobic004G182700--Sobic001G198800 Sobic004G182700--Sobic005G167500 Sobic004G182700--Sobic005G192600 Sobic004G182700--Sobic008G080400 Sobic004G182700--Sobic003G058001 Sobic004G182700--Sobic008G080600 Sobic003G310400 Sobic003G310400 Sobic004G182700--Sobic003G310400 Sobic003G131000 Sobic003G131000 Sobic004G182700--Sobic003G131000 Sobic004G210601--Sobic005G167500 Sobic004G210601--Sobic009G202400 Sobic004G210601--Sobic003G058001 Sobic007G037800 Sobic007G037800 Sobic004G210601--Sobic007G037800 Sobic004G210601--Sobic010G157000 Sobic004G210601--Sobic008G036300 Sobic003G097800 Sobic003G097800 Sobic004G210601--Sobic003G097800 Sobic004G210601--Sobic008G036350 Sobic004G210601--Sobic005G065500 Sobic004G245300 Sobic004G245300 Sobic005G065500--Sobic004G245300 Sobic005G065500--Sobic005G217900 Sobic005G065500--Sobic010G157000 Sobic005G065500--Sobic005G167500 Sobic005G065500--Sobic003G058001 Sobic005G065500--Sobic002G195300 Sobic005G065500--Sobic010G038500 Sobic006G006700 Sobic006G006700 Sobic005G065500--Sobic006G006700 Sobic004G223500 Sobic004G223500 Sobic005G065500--Sobic004G223500 Sobic005G192600--Sobic005G167500 Sobic005G192600--Sobic004G182700 Sobic005G192600--Sobic008G036300 Sobic005G192600--Sobic008G036350 Sobic005G192600--Sobic009G202400 Sobic001G498300 Sobic001G498300 Sobic005G192600--Sobic001G498300 Sobic005G192600--Sobic001G198800 Sobic005G192600--Sobic003G058001 Sobic003G106500 Sobic003G106500 Sobic005G192600--Sobic003G106500 Sobic010G100200--Sobic005G167500 Sobic010G100200--Sobic008G036300 Sobic010G100200--Sobic003G058001 Sobic010G100200--Sobic008G080400 Sobic010G100200--Sobic004G182700 Sobic010G094301 Sobic010G094301 Sobic010G100200--Sobic010G094301 Sobic010G100200--Sobic010G157000 Sobic001G353800 Sobic001G353800 Sobic010G100200--Sobic001G353800 Sobic005G167400 Sobic005G167400 Sobic010G100200--Sobic005G167400 Sobic009G202400--Sobic007G037800 Sobic002G281000 Sobic002G281000 Sobic009G202400--Sobic002G281000 Sobic009G202400--Sobic004G210601 Sobic005G097800 Sobic005G097800 Sobic009G202400--Sobic005G097800 Sobic009G202400--Sobic005G192600 Sobic009G202400--Sobic005G167500 Sobic005G093300 Sobic005G093300 Sobic009G202400--Sobic005G093300 Sobic008G063100 Sobic008G063100 Sobic009G202400--Sobic008G063100 Sobic004G019400 Sobic004G019400 Sobic009G202400--Sobic004G019400
Octagon: transcription factors


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