Gene annotation
Transcriptome id Sobic.010G100200.1
Synonym GAPC, GAPC1, GAPC-1, Sb10g008725
Functional annotation glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
UniProt A0A194YIA3
Pfam PF02800
Panther DB PTHR10836 PTHR10836:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016620; oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor


Orthologs (automatic annotation)
TAIR AT3G04120 : glyceraldehyde-3-phosphate dehydrogenase C subunit 1
RAP-DB (Rice) LOC_Os08g03290.4 : glyceraldehyde-3-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a031861 , Zm00025a021282
Brachypodium -
Barley -
Wheat -
Populus PNT58052 , PNT58053


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cDNA sequences
Sobic.010G100200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167500 resistance protein, putative, expressed -
2 Sobic.008G036300 Ser/Thr protein phosphatase family protein, putative, expressed -
3 Sobic.003G058001 - -
4 Sobic.008G080400 "cyanogenic beta-glucosidase dhurrinase, up-regulated under drought stress "(PubMedID : 24655390)@Os6bglu24 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
5 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
6 Sobic.010G094301 - -
7 Sobic.010G157000 - -
8 Sobic.001G353800 protein kinase domain containing protein, expressed -
9 Sobic.005G167400 resistance protein, putative, expressed -
10 Sobic.005G128800 translationally-controlled tumor protein, putative, expressed -
11 Sobic.009G132900 PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed K01006: pyruvate, orthophosphate dikinase
12 Sobic.001G198800 -(PubMedID : 26465154)@invertase/pectin methylesterase inhibitor family protein, putative, expressed -
13 Sobic.008G080600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
14 Sobic.005G065500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cysteine protease 1 precursor, putative, expressed -
15 Sobic.003G131000 expressed protein -
16 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
17 Sobic.003G057900 ribosomal protein L5, putative, expressed -
18 Sobic.001G361700 expressed protein -
19 Sobic.004G210601 - -
20 Sobic.010G143000 - -


Gene co-expression network
sample Sobic010G100200 Sobic010G100200 Sobic005G167500 Sobic005G167500 Sobic010G100200--Sobic005G167500 Sobic008G036300 Sobic008G036300 Sobic010G100200--Sobic008G036300 Sobic003G058001 Sobic003G058001 Sobic010G100200--Sobic003G058001 Sobic008G080400 Sobic008G080400 Sobic010G100200--Sobic008G080400 Sobic004G182700 Sobic004G182700 Sobic010G100200--Sobic004G182700 Sobic010G094301 Sobic010G094301 Sobic010G100200--Sobic010G094301 Sobic010G157000 Sobic010G157000 Sobic010G100200--Sobic010G157000 Sobic001G353800 Sobic001G353800 Sobic010G100200--Sobic001G353800 Sobic005G167400 Sobic005G167400 Sobic010G100200--Sobic005G167400 Sobic005G167500--Sobic008G036300 Sobic005G167500--Sobic003G058001 Sobic005G167500--Sobic004G182700 Sobic005G192600 Sobic005G192600 Sobic005G167500--Sobic005G192600 Sobic008G036350 Sobic008G036350 Sobic005G167500--Sobic008G036350 Sobic004G210601 Sobic004G210601 Sobic005G167500--Sobic004G210601 Sobic001G198800 Sobic001G198800 Sobic005G167500--Sobic001G198800 Sobic005G065500 Sobic005G065500 Sobic005G167500--Sobic005G065500 Sobic009G202400 Sobic009G202400 Sobic005G167500--Sobic009G202400 Sobic008G036300--Sobic005G167500 Sobic008G036300--Sobic004G182700 Sobic008G036300--Sobic005G192600 Sobic008G036300--Sobic008G036350 Sobic008G036300--Sobic001G198800 Sobic008G036300--Sobic008G080400 Sobic008G036300--Sobic003G058001 Sobic001G338700 Sobic001G338700 Sobic008G036300--Sobic001G338700 Sobic008G080600 Sobic008G080600 Sobic008G036300--Sobic008G080600 Sobic003G058001--Sobic005G167500 Sobic003G058001--Sobic010G157000 Sobic003G058001--Sobic008G036300 Sobic003G058001--Sobic004G182700 Sobic003G058001--Sobic004G210601 Sobic003G058001--Sobic005G065500 Sobic003G058001--Sobic005G192600 Sobic003G058001--Sobic010G100200 Sobic003G058001--Sobic009G202400 Sobic008G080400--Sobic004G182700 Sobic008G080400--Sobic008G036300 Sobic008G067200 Sobic008G067200 Sobic008G080400--Sobic008G067200 Sobic008G080400--Sobic001G198800 Sobic003G057900 Sobic003G057900 Sobic008G080400--Sobic003G057900 Sobic008G080400--Sobic008G080600 Sobic008G080400--Sobic005G167500 Sobic003G131000 Sobic003G131000 Sobic008G080400--Sobic003G131000 Sobic009G132900 Sobic009G132900 Sobic008G080400--Sobic009G132900 Sobic004G182700--Sobic008G036300 Sobic004G182700--Sobic001G198800 Sobic004G182700--Sobic005G167500 Sobic004G182700--Sobic005G192600 Sobic004G182700--Sobic008G080400 Sobic004G182700--Sobic003G058001 Sobic004G182700--Sobic008G080600 Sobic003G310400 Sobic003G310400 Sobic004G182700--Sobic003G310400 Sobic004G182700--Sobic003G131000 Sobic010G094301--Sobic003G057900 Sobic010G094301--Sobic001G353800 Sobic001G192100 Sobic001G192100 Sobic010G094301--Sobic001G192100 Sobic010G094301--Sobic009G132900 Sobic006G234100 Sobic006G234100 Sobic010G094301--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic010G094301--Sobic010G109500 Sobic002G339200 Sobic002G339200 Sobic010G094301--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic010G094301--Sobic001G448400 Sobic006G264201 Sobic006G264201 Sobic010G094301--Sobic006G264201 Sobic010G157000--Sobic003G058001 Sobic010G157000--Sobic005G065500 Sobic010G157000--Sobic005G167500 Sobic010G157000--Sobic004G210601 Sobic002G195300 Sobic002G195300 Sobic010G157000--Sobic002G195300 Sobic010G038500 Sobic010G038500 Sobic010G157000--Sobic010G038500 Sobic005G217900 Sobic005G217900 Sobic010G157000--Sobic005G217900 Sobic010G157000--Sobic010G100200 Sobic001G098600 Sobic001G098600 Sobic010G157000--Sobic001G098600 Sobic001G353800--Sobic005G167400 Sobic001G353800--Sobic010G094301 Sobic004G238500 Sobic004G238500 Sobic001G353800--Sobic004G238500 Sobic001G353800--Sobic006G264201 Sobic009G234600 Sobic009G234600 Sobic001G353800--Sobic009G234600 Sobic008G051000 Sobic008G051000 Sobic001G353800--Sobic008G051000 Sobic003G150600 Sobic003G150600 Sobic001G353800--Sobic003G150600 Sobic001G177000 Sobic001G177000 Sobic001G353800--Sobic001G177000 Sobic001G353800--Sobic010G100200 Sobic005G167400--Sobic001G353800 Sobic005G167400--Sobic004G182700 Sobic001G498300 Sobic001G498300 Sobic005G167400--Sobic001G498300 Sobic005G167400--Sobic004G238500 Sobic005G167400--Sobic005G167500 Sobic005G167400--Sobic008G036300 Sobic005G167400--Sobic005G192600 Sobic005G167400--Sobic010G094301 Sobic005G167400--Sobic010G100200
Octagon: transcription factors


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