Gene annotation
Transcriptome id Sobic.001G353800.2,Sobic.001G353800.1
Synonym FER
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6QMV1
Pfam PF00069 PF07714
Panther DB PTHR27003 PTHR27003:SF53
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G51550 : Malectin/receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os10g05250.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS2B02G588800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G167400 resistance protein, putative, expressed -
2 Sobic.010G094301 - -
3 Sobic.004G238500 Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase
4 Sobic.006G264201 - K08917: light-harvesting complex II chlorophyll a/b binding protein 6
5 Sobic.009G234600 Chorophyll a/b binding protein M9(PubMedID : 26186930)@chlorophyll A-B binding protein, putative, expressed K08912: light-harvesting complex II chlorophyll a/b binding protein 1
6 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
7 Sobic.003G150600 pectinacetylesterase domain containing protein, expressed -
8 Sobic.001G177000 Chorophyll a/b binding protein(PubMedID : 26186930)@Chorophyll a/b binding protein(PubMedID : 26186930)@Light harvesting complex-II subunit B2(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08913: light-harvesting complex II chlorophyll a/b binding protein 2
9 Sobic.010G100200 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed -
10 Sobic.002G339200 Chorophyll a/b binding protein(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Light harvesting complex-II subunit B3(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08914: light-harvesting complex II chlorophyll a/b binding protein 3
11 Sobic.007G116950 - -
12 Sobic.010G143000 - -
13 Sobic.001G042301 - -
14 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
15 Sobic.002G329600 Oxygen-evolving enhancer protein 3-1(PubMedID : 26186930)@Ferredoxin-NADP reductase-binding protein (Zm)(PubMedID : 27208977)@-(PubMedID : 29017446)@oxygen evolving enhancer protein 3 domain containing protein, expressed K08901: photosystem II oxygen-evolving enhancer protein 3
16 Sobic.003G099400 cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
17 Sobic.001G438100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.002G030200 Photosystem II subunit P(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
19 Sobic.001G382100 Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed K08902: photosystem II Psb27 protein
20 Sobic.010G000500 Plastocyanin(PubMedID : 26186930)@plastocyanin, chloroplast precursor, putative, expressed K02638: plastocyanin


Gene co-expression network
sample Sobic001G353800 Sobic001G353800 Sobic005G167400 Sobic005G167400 Sobic001G353800--Sobic005G167400 Sobic010G094301 Sobic010G094301 Sobic001G353800--Sobic010G094301 Sobic004G238500 Sobic004G238500 Sobic001G353800--Sobic004G238500 Sobic006G264201 Sobic006G264201 Sobic001G353800--Sobic006G264201 Sobic009G234600 Sobic009G234600 Sobic001G353800--Sobic009G234600 Sobic008G051000 Sobic008G051000 Sobic001G353800--Sobic008G051000 Sobic003G150600 Sobic003G150600 Sobic001G353800--Sobic003G150600 Sobic001G177000 Sobic001G177000 Sobic001G353800--Sobic001G177000 Sobic010G100200 Sobic010G100200 Sobic001G353800--Sobic010G100200 Sobic005G167400--Sobic001G353800 Sobic004G182700 Sobic004G182700 Sobic005G167400--Sobic004G182700 Sobic001G498300 Sobic001G498300 Sobic005G167400--Sobic001G498300 Sobic005G167400--Sobic004G238500 Sobic005G167500 Sobic005G167500 Sobic005G167400--Sobic005G167500 Sobic008G036300 Sobic008G036300 Sobic005G167400--Sobic008G036300 Sobic005G192600 Sobic005G192600 Sobic005G167400--Sobic005G192600 Sobic005G167400--Sobic010G094301 Sobic005G167400--Sobic010G100200 Sobic003G057900 Sobic003G057900 Sobic010G094301--Sobic003G057900 Sobic010G094301--Sobic001G353800 Sobic001G192100 Sobic001G192100 Sobic010G094301--Sobic001G192100 Sobic009G132900 Sobic009G132900 Sobic010G094301--Sobic009G132900 Sobic006G234100 Sobic006G234100 Sobic010G094301--Sobic006G234100 Sobic010G109500 Sobic010G109500 Sobic010G094301--Sobic010G109500 Sobic002G339200 Sobic002G339200 Sobic010G094301--Sobic002G339200 Sobic001G448400 Sobic001G448400 Sobic010G094301--Sobic001G448400 Sobic010G094301--Sobic006G264201 Sobic004G238500--Sobic006G264201 Sobic004G238500--Sobic008G051000 Sobic002G297300 Sobic002G297300 Sobic004G238500--Sobic002G297300 Sobic002G329600 Sobic002G329600 Sobic004G238500--Sobic002G329600 Sobic009G091800 Sobic009G091800 Sobic004G238500--Sobic009G091800 Sobic007G116950 Sobic007G116950 Sobic004G238500--Sobic007G116950 Sobic003G132100 Sobic003G132100 Sobic004G238500--Sobic003G132100 Sobic001G382100 Sobic001G382100 Sobic004G238500--Sobic001G382100 Sobic007G029300 Sobic007G029300 Sobic004G238500--Sobic007G029300 Sobic006G264201--Sobic002G329600 Sobic006G264201--Sobic002G339200 Sobic006G264201--Sobic004G238500 Sobic006G264201--Sobic009G234600 Sobic006G264201--Sobic007G029300 Sobic010G241000 Sobic010G241000 Sobic006G264201--Sobic010G241000 Sobic001G078000 Sobic001G078000 Sobic006G264201--Sobic001G078000 Sobic006G264201--Sobic001G448400 Sobic006G264201--Sobic009G091800 Sobic009G234600--Sobic010G241000 Sobic006G264900 Sobic006G264900 Sobic009G234600--Sobic006G264900 Sobic009G234600--Sobic002G329600 Sobic009G234600--Sobic001G177000 Sobic009G234600--Sobic002G339200 Sobic009G234600--Sobic006G264201 Sobic010G000500 Sobic010G000500 Sobic009G234600--Sobic010G000500 Sobic001G046900 Sobic001G046900 Sobic009G234600--Sobic001G046900 Sobic009G234600--Sobic001G078000 Sobic008G051000--Sobic009G091800 Sobic008G051000--Sobic004G238500 Sobic008G051000--Sobic007G116950 Sobic001G203000 Sobic001G203000 Sobic008G051000--Sobic001G203000 Sobic008G051000--Sobic003G132100 Sobic008G051000--Sobic006G264201 Sobic009G091850 Sobic009G091850 Sobic008G051000--Sobic009G091850 Sobic004G234200 Sobic004G234200 Sobic008G051000--Sobic004G234200 Sobic008G051000--Sobic002G297300 Sobic001G221300 Sobic001G221300 Sobic003G150600--Sobic001G221300 Sobic010G011800 Sobic010G011800 Sobic003G150600--Sobic010G011800 Sobic003G150600--Sobic009G091800 Sobic003G150600--Sobic008G051000 Sobic003G150600--Sobic004G238500 Sobic010G022100 Sobic010G022100 Sobic003G150600--Sobic010G022100 Sobic003G433900 Sobic003G433900 Sobic003G150600--Sobic003G433900 Sobic003G069200 Sobic003G069200 Sobic003G150600--Sobic003G069200 Sobic002G288300 Sobic002G288300 Sobic003G150600--Sobic002G288300 Sobic004G056900 Sobic004G056900 Sobic001G177000--Sobic004G056900 Sobic002G242000 Sobic002G242000 Sobic001G177000--Sobic002G242000 Sobic001G177000--Sobic001G046900 Sobic001G177000--Sobic010G241000 Sobic002G030200 Sobic002G030200 Sobic001G177000--Sobic002G030200 Sobic008G063500 Sobic008G063500 Sobic001G177000--Sobic008G063500 Sobic001G177000--Sobic009G234600 Sobic007G136900 Sobic007G136900 Sobic001G177000--Sobic007G136900 Sobic002G338000 Sobic002G338000 Sobic001G177000--Sobic002G338000 Sobic010G100200--Sobic005G167500 Sobic010G100200--Sobic008G036300 Sobic003G058001 Sobic003G058001 Sobic010G100200--Sobic003G058001 Sobic008G080400 Sobic008G080400 Sobic010G100200--Sobic008G080400 Sobic010G100200--Sobic004G182700 Sobic010G100200--Sobic010G094301 Sobic010G157000 Sobic010G157000 Sobic010G100200--Sobic010G157000 Sobic010G100200--Sobic001G353800 Sobic010G100200--Sobic005G167400
Octagon: transcription factors


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