Gene annotation
Transcriptome id Sobic.008G019100.1
Synonym
Functional annotation -
UniProt A0A1B6PAQ7
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G132100 magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
2 Sobic.003G433900 expressed protein -
3 Sobic.001G415400 PsbP, putative, expressed -
4 Sobic.003G197400 Protein lycopene epsilon cyclase (Os)(PubMedID : 27208977)@-(PubMedID : 29017446)@lycopene epsilon cyclase, chloroplast precursor, putative, expressed K06444: lcyE, lycopene epsilon-cyclase
5 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
6 Sobic.008G051000 magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed K03405: chlI, magnesium chelatase subunit I
7 Sobic.002G152700 rhodanese-like, putative, expressed -
8 Sobic.004G343300 -(PubMedID : 26465154)@unknown(PubMedID : 29017446)@expressed protein -
9 Sobic.001G192100 "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
10 Sobic.006G200800 phosphoribulokinase/Uridine kinase family protein, expressed K00855: PRK, phosphoribulokinase
11 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
12 Sobic.001G010100 ankyrin repeat domain containing protein, expressed -
13 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
14 Sobic.002G227700 gibberellin receptor GID1L2, putative, expressed -
15 Sobic.002G152800 RNA recognition motif containing protein, putative, expressed -
16 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
17 Sobic.002G033800 expressed protein -
18 Sobic.009G091850 - -
19 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
20 Sobic.002G198600 -(PubMedID : 29017446)@expressed protein -


Gene co-expression network
sample Sobic008G019100 Sobic008G019100 Sobic003G132100 Sobic003G132100 Sobic008G019100--Sobic003G132100 Sobic003G433900 Sobic003G433900 Sobic008G019100--Sobic003G433900 Sobic001G415400 Sobic001G415400 Sobic008G019100--Sobic001G415400 Sobic003G197400 Sobic003G197400 Sobic008G019100--Sobic003G197400 Sobic004G175500 Sobic004G175500 Sobic008G019100--Sobic004G175500 Sobic008G051000 Sobic008G051000 Sobic008G019100--Sobic008G051000 Sobic002G152700 Sobic002G152700 Sobic008G019100--Sobic002G152700 Sobic004G343300 Sobic004G343300 Sobic008G019100--Sobic004G343300 Sobic001G192100 Sobic001G192100 Sobic008G019100--Sobic001G192100 Sobic003G132100--Sobic004G343300 Sobic003G132100--Sobic008G051000 Sobic003G132100--Sobic003G197400 Sobic006G264201 Sobic006G264201 Sobic003G132100--Sobic006G264201 Sobic004G238500 Sobic004G238500 Sobic003G132100--Sobic004G238500 Sobic003G132100--Sobic003G433900 Sobic004G249800 Sobic004G249800 Sobic003G132100--Sobic004G249800 Sobic001G448400 Sobic001G448400 Sobic003G132100--Sobic001G448400 Sobic009G091800 Sobic009G091800 Sobic003G132100--Sobic009G091800 Sobic002G198600 Sobic002G198600 Sobic003G433900--Sobic002G198600 Sobic003G433900--Sobic003G132100 Sobic009G091850 Sobic009G091850 Sobic003G433900--Sobic009G091850 Sobic009G130700 Sobic009G130700 Sobic003G433900--Sobic009G130700 Sobic003G433900--Sobic008G051000 Sobic003G433900--Sobic009G091800 Sobic003G433900--Sobic004G238500 Sobic002G297300 Sobic002G297300 Sobic003G433900--Sobic002G297300 Sobic002G033800 Sobic002G033800 Sobic003G433900--Sobic002G033800 Sobic007G143700 Sobic007G143700 Sobic001G415400--Sobic007G143700 Sobic010G277600 Sobic010G277600 Sobic001G415400--Sobic010G277600 Sobic001G527000 Sobic001G527000 Sobic001G415400--Sobic001G527000 Sobic009G030900 Sobic009G030900 Sobic001G415400--Sobic009G030900 Sobic001G415400--Sobic002G198600 Sobic007G004600 Sobic007G004600 Sobic001G415400--Sobic007G004600 Sobic001G041800 Sobic001G041800 Sobic001G415400--Sobic001G041800 Sobic001G415400--Sobic004G175500 Sobic001G415400--Sobic003G132100 Sobic003G197400--Sobic001G041800 Sobic003G197400--Sobic003G132100 Sobic003G197400--Sobic004G343300 Sobic006G222700 Sobic006G222700 Sobic003G197400--Sobic006G222700 Sobic006G103400 Sobic006G103400 Sobic003G197400--Sobic006G103400 Sobic007G029300 Sobic007G029300 Sobic003G197400--Sobic007G029300 Sobic003G197400--Sobic004G175500 Sobic003G197400--Sobic001G448400 Sobic003G197400--Sobic002G033800 Sobic003G387800 Sobic003G387800 Sobic004G175500--Sobic003G387800 Sobic004G175500--Sobic004G343300 Sobic007G004800 Sobic007G004800 Sobic004G175500--Sobic007G004800 Sobic004G175500--Sobic002G198600 Sobic004G175500--Sobic004G249800 Sobic007G071500 Sobic007G071500 Sobic004G175500--Sobic007G071500 Sobic001G029100 Sobic001G029100 Sobic004G175500--Sobic001G029100 Sobic004G175500--Sobic006G103400 Sobic004G175500--Sobic009G030900 Sobic008G051000--Sobic009G091800 Sobic008G051000--Sobic004G238500 Sobic007G116950 Sobic007G116950 Sobic008G051000--Sobic007G116950 Sobic001G203000 Sobic001G203000 Sobic008G051000--Sobic001G203000 Sobic008G051000--Sobic003G132100 Sobic008G051000--Sobic006G264201 Sobic008G051000--Sobic009G091850 Sobic004G234200 Sobic004G234200 Sobic008G051000--Sobic004G234200 Sobic008G051000--Sobic002G297300 Sobic008G021300 Sobic008G021300 Sobic002G152700--Sobic008G021300 Sobic002G152700--Sobic001G527000 Sobic002G152700--Sobic002G033800 Sobic003G303700 Sobic003G303700 Sobic002G152700--Sobic003G303700 Sobic010G005500 Sobic010G005500 Sobic002G152700--Sobic010G005500 Sobic006G272900 Sobic006G272900 Sobic002G152700--Sobic006G272900 Sobic002G152700--Sobic004G343300 Sobic002G152700--Sobic009G030900 Sobic002G152700--Sobic003G132100 Sobic004G343300--Sobic004G249800 Sobic004G343300--Sobic003G132100 Sobic006G105900 Sobic006G105900 Sobic004G343300--Sobic006G105900 Sobic004G343300--Sobic001G448400 Sobic004G343300--Sobic007G071500 Sobic010G241000 Sobic010G241000 Sobic004G343300--Sobic010G241000 Sobic006G234100 Sobic006G234100 Sobic004G343300--Sobic006G234100 Sobic004G343300--Sobic004G175500 Sobic004G343300--Sobic002G033800 Sobic003G057900 Sobic003G057900 Sobic001G192100--Sobic003G057900 Sobic010G006350 Sobic010G006350 Sobic001G192100--Sobic010G006350 Sobic001G464700 Sobic001G464700 Sobic001G192100--Sobic001G464700 Sobic010G255600 Sobic010G255600 Sobic001G192100--Sobic010G255600 Sobic010G094301 Sobic010G094301 Sobic001G192100--Sobic010G094301 Sobic003G099400 Sobic003G099400 Sobic001G192100--Sobic003G099400 Sobic001G192100--Sobic003G132100 Sobic001G192100--Sobic009G091850 Sobic009G132900 Sobic009G132900 Sobic001G192100--Sobic009G132900
Octagon: transcription factors


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