Gene annotation
| Transcriptome id | Sobic.001G192100.1 |
|---|---|
| Synonym | CYP76C1, Sb01g016900, |
| Functional annotation | "Belongs to the cytochrome P450 family, up-regulated under all the stress condition" (PubMedID : 24655390) SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) Belongs to the cytochrome P450 family (PubMedID : 24655390) Up-reguralion under heat (PubMedID : 24916767) cytochrome P450, putative, expressed |
| UniProt | C5WVB9 |
| Pfam | PF00067 |
| Panther DB | PTHR24298 PTHR24298:SF75 |
| NCBI CDD | KOG0156; Cytochrome P450 CYP2 subfamily |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT2G45560 : cytochrome P450, family 76, subfamily C, polypeptide 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os10g08319.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ96341 |
| Barley | HORVU2Hr1G121170.2 , HORVU2Hr1G121170.3 , HORVU2Hr1G121170.4 , HORVU2Hr1G121170.1 |
| Wheat | TraesCS2D02G547400 , TraesCS2B02G560400 , TraesCS2A02G546400 , TraesCS2B02G559600 , TraesCS7A02G077500 , TraesCS2D02G547700 , TraesCS2A02G529900 , TraesCS2A02G546600 , TraesCS2B02G577200 , TraesCS2A02G546200 , TraesCS7D02G415700 , TraesCS2B02G577100 , TraesCS7D02G415600 , TraesCS2D02G547500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.003G057900 | ribosomal protein L5, putative, expressed | - |
| 2 | Sobic.010G006350 | - | - |
| 3 | Sobic.001G464700 | - | - |
| 4 | Sobic.010G255600 | thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed | - |
| 5 | Sobic.010G094301 | - | - |
| 6 | Sobic.003G099400 | cyclophilin-type(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase, putative, expressed | K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B) |
| 7 | Sobic.003G132100 | magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed | K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase |
| 8 | Sobic.009G091850 | - | - |
| 9 | Sobic.009G132900 | PPDK(PubMedID : 19549309)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@pyruvate orthophosphate dikinase(PubMedID : 26465154)@phyruvate phosphate dikinase(PubMedID : 26904072)@-(PubMedID : 26976818)@pyruvate, phosphate dikinase, chloroplast precursor, putative, expressed | K01006: pyruvate, orthophosphate dikinase |
| 10 | Sobic.001G221300 | alcohol oxidase, putative, expressed | K17756: long-chain-alcohol oxidase |
| 11 | Sobic.008G019100 | - | - |
| 12 | Sobic.006G234100 | shikimate/quinate 5-dehydrogenase, putative, expressed | K02492: glutamyl-tRNA reductase |
| 13 | Sobic.001G382100 | Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed | K08902: photosystem II Psb27 protein |
| 14 | Sobic.003G150600 | pectinacetylesterase domain containing protein, expressed | - |
| 15 | Sobic.008G051000 | magnesium-chelatase subunit chlI, chloroplast precursor, putative, expressed | K03405: chlI, magnesium chelatase subunit I |
| 16 | Sobic.004G036100 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 17 | Sobic.002G264800 | unknown(PubMedID : 29017446)@expressed protein | - |
| 18 | Sobic.008G048501 | - | - |
| 19 | Sobic.004G238500 | Geranylgeranyl reductase (Os)(PubMedID : 27208977)@FAD binding domain containing protein, expressed | K10960: chlP, geranylgeranyl diphosphate/geranylgeranyl-bacteriochlorophyllide a reductase |
| 20 | Sobic.001G448400 | UbiE/COQ5 methyltransferase family protein (Sb)(PubMedID : 27208977)@methyltransferase domain containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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