Gene annotation
| Transcriptome id | Sobic.008G048501.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5R4T1 |
| Pfam | PF00657 |
| Panther DB | PTHR22835 PTHR22835:SF272 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | GO:0016788; hydrolase activity, acting on ester bonds |
Orthologs (automatic annotation)
| TAIR | AT1G28580 : GDSL-like Lipase/Acylhydrolase superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g12320.1 : GDSL-like lipase/acylhydrolase, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQK03356 |
| Barley | HORVU7Hr1G011810.1 , HORVU7Hr1G011810.2 , HORVU7Hr1G011810.3 , HORVU7Hr1G011810.5 , HORVU5Hr1G103170.1 , HORVU5Hr1G103170.3 , HORVU5Hr1G103170.2 , HORVU3Hr1G028050.1 , HORVU3Hr1G028050.2 , HORVU3Hr1G030080.8 , HORVU3Hr1G030080.6 , HORVU3Hr1G030080.7 , HORVU3Hr1G030080.4 , HORVU3Hr1G030080.5 , HORVU3Hr1G030080.1 , HORVU3Hr1G055350.7 , HORVU3Hr1G055350.6 , HORVU3Hr1G055350.5 , HORVU3Hr1G055350.3 , HORVU3Hr1G055350.2 , HORVU3Hr1G055350.1 , HORVU3Hr1G055350.8 |
| Wheat | TraesCS4A02G426300 , TraesCS5B02G424700 , TraesCS3B02G175200 , TraesCS3B02G264800 , TraesCS3D02G156000 , TraesCS3A02G141200 , TraesCS3B02G175100 , TraesCS3D02G145900 , TraesCS7A02G062600 , TraesCS5D02G431000 , TraesCS4A02G426700 , TraesCS5A02G422800 , TraesCS3B02G175000 , TraesCS3B02G174900 , TraesCS3B02G163400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.001G221300 | alcohol oxidase, putative, expressed | K17756: long-chain-alcohol oxidase |
| 2 | Sobic.001G192100 | "Belongs to the cytochrome P450 family, up-regulated under all the stress condition"(PubMedID : 24655390)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Belongs to the cytochrome P450 family(PubMedID : 24655390)@Up-reguralion under heat(PubMedID : 24916767)@cytochrome P450, putative, expressed | - |
| 3 | Sobic.003G069200 | transferase family protein, putative, expressed | K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase |
| 4 | Sobic.004G036100 | SAM dependent carboxyl methyltransferase, putative, expressed | - |
| 5 | Sobic.010G255600 | thylakoid lumenal 16.5 kDa protein, chloroplast precursor, putative, expressed | - |
| 6 | Sobic.010G006350 | - | - |
| 7 | Sobic.003G157400 | TPR repeat, putative, expressed | - |
| 8 | Sobic.009G238300 | expressed protein | - |
| 9 | Sobic.003G433900 | expressed protein | - |
| 10 | Sobic.003G150600 | pectinacetylesterase domain containing protein, expressed | - |
| 11 | Sobic.006G013800 | CBS domain containing membrane protein, putative, expressed | - |
| 12 | Sobic.001G464700 | - | - |
| 13 | Sobic.009G091850 | - | - |
| 14 | Sobic.002G341500 | rotamase(PubMedID : 29017446)@peptidyl-prolyl cis-trans isomerase CYP37, chloroplast precursor, putative, expressed | - |
| 15 | Sobic.008G080100 | Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed | K01188: beta-glucosidase |
| 16 | Sobic.006G145500 | Beta-glucosidase 16 (Precursor)(PubMedID : 26186930)@Os4bglu16 - monolignol beta-glucoside homologue, expressed | K05350: beta-glucosidase |
| 17 | Sobic.007G165500 | MATE efflux family protein, putative, expressed | K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family |
| 18 | Sobic.001G382100 | Photosystem II repair protein PSB27-H1(PubMedID : 26186930)@Photosystem II 11 kD protein (Os)(PubMedID : 27208977)@photosystem II 11 kD protein, putative, expressed | K08902: photosystem II Psb27 protein |
| 19 | Sobic.003G057900 | ribosomal protein L5, putative, expressed | - |
| 20 | Sobic.006G155700 | ABC transporter(PubMedID : 23463491)@white-brown complex homolog protein 11, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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