Gene annotation
Transcriptome id Sobic.006G145500.8,Sobic.006G145500.9,Sobic.006G145500.1,Sobic.006G145500.7,Sobic.006G145500.4,Sobic.006G145500.11,Sobic.006G145500.3,Sobic.006G145500.6,Sobic.006G145500.2,Sobic.006G145500.5,Sobic.006G145500.10
Synonym Sb06g022410, BGLU46
Functional annotation Beta-glucosidase 16 (Precursor) (PubMedID : 26186930)
Os4bglu16 - monolignol beta-glucoside homologue, expressed
UniProt A0A1B6PM13 , A0A1Z5RDX9 , A0A1Z5RDZ6 , C5YC13 , A0A1Z5REE0 , A0A1Z5RDY2
Pfam PF00232
Panther DB PTHR10353:SF54 PTHR10353 PTHR10353 PTHR10353:SF54
NCBI CDD KOG0626; Beta-glucosidase, lactase phlorizinhydrolase, and related proteins
KEGG Orthology K05350; beta-glucosidase
Gene Ontology GO:0004553; hydrolase activity, hydrolyzing O-glycosyl compounds GO:0005975carbohydrate metabolic process GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G61820 : beta-glucosidase 47,beta glucosidase 46
RAP-DB (Rice) LOC_Os04g43390.2,LOC_Os04g43360.1 : Os4bglu16 - monolignol beta-glucoside homologue, expressed,Os4bglu14 - monolignol beta-glucoside homologue without catalytic acid/base, expressed
MaizeGDB (Corn) Zm00025a010686 , Zm00025a010687 , Zm00025a010684
Brachypodium KQJ83561 , KQJ83562 , KQJ83563 , PNT61472 , PNT61471
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G036100 SAM dependent carboxyl methyltransferase, putative, expressed -
2 Sobic.003G383600 - -
3 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
4 Sobic.004G044200 enoyl-CoA hydratase/isomerase family protein, putative, expressed K01661: naphthoate synthase
5 Sobic.004G038300 cycloartenol synthase, putative, expressed -
6 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
7 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
8 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
9 Sobic.003G068300 transferase family protein, putative, expressed -
10 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
11 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.007G185100 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
13 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.003G120500 transmembrane protein 136, putative, expressed -
15 Sobic.009G215600 expressed protein -
16 Sobic.002G416950 - -
17 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.010G215500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed K17710: pentatricopeptide repeat domain-containing protein 1
19 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
20 Sobic.002G415300 - -


Gene co-expression network
sample Sobic006G145500 Sobic006G145500 Sobic004G036100 Sobic004G036100 Sobic006G145500--Sobic004G036100 Sobic003G383600 Sobic003G383600 Sobic006G145500--Sobic003G383600 Sobic007G170800 Sobic007G170800 Sobic006G145500--Sobic007G170800 Sobic004G044200 Sobic004G044200 Sobic006G145500--Sobic004G044200 Sobic004G038300 Sobic004G038300 Sobic006G145500--Sobic004G038300 Sobic008G163200 Sobic008G163200 Sobic006G145500--Sobic008G163200 Sobic001G255300 Sobic001G255300 Sobic006G145500--Sobic001G255300 Sobic009G001500 Sobic009G001500 Sobic006G145500--Sobic009G001500 Sobic003G068300 Sobic003G068300 Sobic006G145500--Sobic003G068300 Sobic010G255600 Sobic010G255600 Sobic004G036100--Sobic010G255600 Sobic003G120500 Sobic003G120500 Sobic004G036100--Sobic003G120500 Sobic003G157400 Sobic003G157400 Sobic004G036100--Sobic003G157400 Sobic001G464700 Sobic001G464700 Sobic004G036100--Sobic001G464700 Sobic003G069200 Sobic003G069200 Sobic004G036100--Sobic003G069200 Sobic007G185100 Sobic007G185100 Sobic004G036100--Sobic007G185100 Sobic004G054500 Sobic004G054500 Sobic004G036100--Sobic004G054500 Sobic004G036100--Sobic004G044200 Sobic004G036100--Sobic006G145500 Sobic003G295800 Sobic003G295800 Sobic003G383600--Sobic003G295800 Sobic007G013400 Sobic007G013400 Sobic003G383600--Sobic007G013400 Sobic008G123600 Sobic008G123600 Sobic003G383600--Sobic008G123600 Sobic001G069500 Sobic001G069500 Sobic003G383600--Sobic001G069500 Sobic003G383600--Sobic009G001500 Sobic008G030000 Sobic008G030000 Sobic003G383600--Sobic008G030000 Sobic009G098100 Sobic009G098100 Sobic003G383600--Sobic009G098100 Sobic010G215500 Sobic010G215500 Sobic003G383600--Sobic010G215500 Sobic003G383500 Sobic003G383500 Sobic003G383600--Sobic003G383500 Sobic004G060700 Sobic004G060700 Sobic007G170800--Sobic004G060700 Sobic003G114200 Sobic003G114200 Sobic007G170800--Sobic003G114200 Sobic007G009600 Sobic007G009600 Sobic007G170800--Sobic007G009600 Sobic002G416950 Sobic002G416950 Sobic007G170800--Sobic002G416950 Sobic007G170800--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic007G170800--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic007G170800--Sobic002G415300 Sobic001G541300 Sobic001G541300 Sobic007G170800--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic007G170800--Sobic001G379300 Sobic004G044200--Sobic009G001500 Sobic004G044200--Sobic007G013400 Sobic004G044200--Sobic003G295800 Sobic004G044200--Sobic001G541300 Sobic004G044200--Sobic007G185100 Sobic003G328200 Sobic003G328200 Sobic004G044200--Sobic003G328200 Sobic005G218600 Sobic005G218600 Sobic004G044200--Sobic005G218600 Sobic005G218201 Sobic005G218201 Sobic004G044200--Sobic005G218201 Sobic003G386300 Sobic003G386300 Sobic004G044200--Sobic003G386300 Sobic003G317800 Sobic003G317800 Sobic004G038300--Sobic003G317800 Sobic004G038300--Sobic001G255300 Sobic004G328900 Sobic004G328900 Sobic004G038300--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic004G038300--Sobic002G128600 Sobic004G038300--Sobic001G379300 Sobic005G190800 Sobic005G190800 Sobic004G038300--Sobic005G190800 Sobic006G238100 Sobic006G238100 Sobic004G038300--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic004G038300--Sobic002G209800 Sobic003G007800 Sobic003G007800 Sobic004G038300--Sobic003G007800 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic002G415400 Sobic002G415400 Sobic008G163200--Sobic002G415400 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic008G163200--Sobic003G068300 Sobic008G163200--Sobic001G379300 Sobic008G163200--Sobic001G255300 Sobic008G163200--Sobic001G435600 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic008G189500 Sobic008G189500 Sobic001G255300--Sobic008G189500 Sobic001G255300--Sobic003G068300 Sobic009G001500--Sobic007G013400 Sobic009G001500--Sobic003G383500 Sobic009G001500--Sobic003G295800 Sobic009G001500--Sobic004G044200 Sobic004G044000 Sobic004G044000 Sobic009G001500--Sobic004G044000 Sobic009G001500--Sobic003G383600 Sobic007G211100 Sobic007G211100 Sobic009G001500--Sobic007G211100 Sobic009G001500--Sobic008G030000 Sobic001G383900 Sobic001G383900 Sobic009G001500--Sobic001G383900 Sobic003G068300--Sobic002G415300 Sobic003G068300--Sobic002G415400 Sobic003G068300--Sobic008G163200 Sobic003G068300--Sobic001G255300 Sobic009G206000 Sobic009G206000 Sobic003G068300--Sobic009G206000 Sobic003G068300--Sobic004G060700 Sobic003G068300--Sobic006G238100 Sobic003G068300--Sobic002G416950 Sobic003G068300--Sobic004G328900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.