Gene annotation
Transcriptome id Sobic.002G152700.1
Synonym Sb02g018640
Functional annotation rhodanese-like, putative, expressed
UniProt C5X860
Pfam PF00581
Panther DB PTHR12231 PTHR12231:SF111
NCBI CDD KOG1530; Rhodanese-related sulfurtransferase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42220 : Rhodanese/Cell cycle control phosphatase superfamily protein
RAP-DB (Rice) LOC_Os09g10750.1 : rhodanese-like, putative, expressed
MaizeGDB (Corn) Zm00025a046191
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G021300 Unnamed(PubMedID : 24676859)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FHA domain containing protein, putative, expressed -
2 Sobic.001G527000 PsbP-like protein 1 (At)(PubMedID : 27208977)@Photosystem I subunit P-like protein(PubMedID : 29017446)@PsbP, putative, expressed K02717: photosystem II oxygen-evolving enhancer protein 2
3 Sobic.002G033800 expressed protein -
4 Sobic.003G303700 Protein thylakoid membrane phosphoprotein 14 kda (Os)(PubMedID : 27208977)@expressed protein -
5 Sobic.010G005500 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
6 Sobic.006G272900 peroxidase activity(PubMedID : 29491869)@glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
7 Sobic.004G343300 -(PubMedID : 26465154)@unknown(PubMedID : 29017446)@expressed protein -
8 Sobic.009G030900 bundle sheath defective protein 2, putative, expressed -
9 Sobic.003G132100 magnesium-protoporphyrin IX monomethyl ester cyclase,chloroplast precursor, putative, expressed K04035: E1.14.13.81, acsF, magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase
10 Sobic.007G004800 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
11 Sobic.003G387800 unknown(PubMedID : 29017446)@rhodanese-like domain containing protein, putative, expressed -
12 Sobic.009G091850 - -
13 Sobic.004G175500 OsAPx8 - Thylakoid-bound Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
14 Sobic.007G004600 Ferredoxin-1(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
15 Sobic.007G071500 photosystem II 10 kDa polypeptide, chloroplast precursor, putative, expressed K03541: photosystem II 10kDa protein
16 Sobic.009G043000 thioredoxin, putative, expressed -
17 Sobic.004G249800 expressed protein -
18 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.004G023200 Polyketide cyclase/dehydrase and lipid transport superfamily protein(PubMedID : 26465154)@membrane related protein CP5, putative, expressed -
20 Sobic.001G102800 expressed protein -


Gene co-expression network
sample Sobic002G152700 Sobic002G152700 Sobic008G021300 Sobic008G021300 Sobic002G152700--Sobic008G021300 Sobic001G527000 Sobic001G527000 Sobic002G152700--Sobic001G527000 Sobic002G033800 Sobic002G033800 Sobic002G152700--Sobic002G033800 Sobic003G303700 Sobic003G303700 Sobic002G152700--Sobic003G303700 Sobic010G005500 Sobic010G005500 Sobic002G152700--Sobic010G005500 Sobic006G272900 Sobic006G272900 Sobic002G152700--Sobic006G272900 Sobic004G343300 Sobic004G343300 Sobic002G152700--Sobic004G343300 Sobic009G030900 Sobic009G030900 Sobic002G152700--Sobic009G030900 Sobic003G132100 Sobic003G132100 Sobic002G152700--Sobic003G132100 Sobic008G021300--Sobic003G303700 Sobic008G021300--Sobic002G152700 Sobic007G004800 Sobic007G004800 Sobic008G021300--Sobic007G004800 Sobic008G021300--Sobic006G272900 Sobic004G035500 Sobic004G035500 Sobic008G021300--Sobic004G035500 Sobic010G201700 Sobic010G201700 Sobic008G021300--Sobic010G201700 Sobic001G519800 Sobic001G519800 Sobic008G021300--Sobic001G519800 Sobic001G102800 Sobic001G102800 Sobic008G021300--Sobic001G102800 Sobic009G043000 Sobic009G043000 Sobic008G021300--Sobic009G043000 Sobic009G091850 Sobic009G091850 Sobic001G527000--Sobic009G091850 Sobic007G004600 Sobic007G004600 Sobic001G527000--Sobic007G004600 Sobic001G527000--Sobic002G152700 Sobic001G415400 Sobic001G415400 Sobic001G527000--Sobic001G415400 Sobic005G123200 Sobic005G123200 Sobic001G527000--Sobic005G123200 Sobic010G277600 Sobic010G277600 Sobic001G527000--Sobic010G277600 Sobic009G183700 Sobic009G183700 Sobic001G527000--Sobic009G183700 Sobic001G527000--Sobic009G030900 Sobic007G143700 Sobic007G143700 Sobic001G527000--Sobic007G143700 Sobic002G033800--Sobic004G343300 Sobic002G033800--Sobic003G132100 Sobic004G023200 Sobic004G023200 Sobic002G033800--Sobic004G023200 Sobic007G071500 Sobic007G071500 Sobic002G033800--Sobic007G071500 Sobic002G033800--Sobic002G152700 Sobic006G103400 Sobic006G103400 Sobic002G033800--Sobic006G103400 Sobic004G175500 Sobic004G175500 Sobic002G033800--Sobic004G175500 Sobic001G448400 Sobic001G448400 Sobic002G033800--Sobic001G448400 Sobic001G029100 Sobic001G029100 Sobic002G033800--Sobic001G029100 Sobic003G303700--Sobic008G021300 Sobic003G303700--Sobic010G201700 Sobic007G140800 Sobic007G140800 Sobic003G303700--Sobic007G140800 Sobic003G303700--Sobic002G152700 Sobic003G303700--Sobic009G043000 Sobic003G303700--Sobic001G102800 Sobic004G272100 Sobic004G272100 Sobic003G303700--Sobic004G272100 Sobic004G274100 Sobic004G274100 Sobic003G303700--Sobic004G274100 Sobic010G153900 Sobic010G153900 Sobic003G303700--Sobic010G153900 Sobic007G052400 Sobic007G052400 Sobic010G005500--Sobic007G052400 Sobic003G002300 Sobic003G002300 Sobic010G005500--Sobic003G002300 Sobic010G005500--Sobic009G030900 Sobic010G005500--Sobic009G183700 Sobic002G277100 Sobic002G277100 Sobic010G005500--Sobic002G277100 Sobic003G387800 Sobic003G387800 Sobic010G005500--Sobic003G387800 Sobic004G012900 Sobic004G012900 Sobic010G005500--Sobic004G012900 Sobic010G005500--Sobic010G277600 Sobic009G059300 Sobic009G059300 Sobic010G005500--Sobic009G059300 Sobic006G272900--Sobic008G021300 Sobic006G272900--Sobic009G043000 Sobic006G272900--Sobic010G005500 Sobic006G272900--Sobic003G002300 Sobic006G272900--Sobic002G152700 Sobic006G272900--Sobic010G201700 Sobic006G272900--Sobic003G387800 Sobic006G272900--Sobic007G004800 Sobic006G272900--Sobic001G102800 Sobic004G249800 Sobic004G249800 Sobic004G343300--Sobic004G249800 Sobic004G343300--Sobic003G132100 Sobic006G105900 Sobic006G105900 Sobic004G343300--Sobic006G105900 Sobic004G343300--Sobic001G448400 Sobic004G343300--Sobic007G071500 Sobic010G241000 Sobic010G241000 Sobic004G343300--Sobic010G241000 Sobic006G234100 Sobic006G234100 Sobic004G343300--Sobic006G234100 Sobic004G343300--Sobic004G175500 Sobic004G343300--Sobic002G033800 Sobic009G030900--Sobic010G005500 Sobic009G030900--Sobic010G277600 Sobic009G030900--Sobic007G052400 Sobic009G030900--Sobic009G183700 Sobic009G030900--Sobic003G387800 Sobic009G030900--Sobic009G059300 Sobic009G030900--Sobic003G002300 Sobic008G171300 Sobic008G171300 Sobic009G030900--Sobic008G171300 Sobic009G030900--Sobic004G175500 Sobic003G132100--Sobic004G343300 Sobic008G051000 Sobic008G051000 Sobic003G132100--Sobic008G051000 Sobic003G197400 Sobic003G197400 Sobic003G132100--Sobic003G197400 Sobic006G264201 Sobic006G264201 Sobic003G132100--Sobic006G264201 Sobic004G238500 Sobic004G238500 Sobic003G132100--Sobic004G238500 Sobic003G433900 Sobic003G433900 Sobic003G132100--Sobic003G433900 Sobic003G132100--Sobic004G249800 Sobic003G132100--Sobic001G448400 Sobic009G091800 Sobic009G091800 Sobic003G132100--Sobic009G091800
Octagon: transcription factors


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