Gene annotation
Transcriptome id Sobic.001G498300.1
Synonym NDH45, Sb01g046560, NDF2
Functional annotation galactose mutarotase-like, putative, expressed
UniProt A0A1B6QQE3
Pfam -
Panther DB PTHR11122 PTHR11122:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G64770 : NDH-dependent cyclic electron flow 1
RAP-DB (Rice) LOC_Os03g06230.1 : galactose mutarotase-like, putative, expressed
MaizeGDB (Corn) Zm00025a053445 , Zm00025a000731
Brachypodium -
Barley HORVU4Hr1G072930.2 , HORVU4Hr1G072930.1
Wheat TraesCS4B02G274300 , TraesCS4A02G031700 , TraesCS4D02G273000
Populus -


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cDNA sequences
Sobic.001G498300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.007G178500 cytochrome P450, putative, expressed -
4 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
5 Sobic.008G063500 Photosystem I reaction center subunit N(PubMedID : 26186930)@photosystem I reaction center subunit N, chloroplast precursor, putative, expressed K02701: photosystem I subunit PsaN
6 Sobic.004G343100 YCF37, putative, expressed -
7 Sobic.005G021600 expressed protein -
8 Sobic.005G192600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
9 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
11 Sobic.010G265500 expressed protein -
12 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
13 Sobic.002G242000 Photosystem I reaction center subunit V(PubMedID : 26186930)@photosystem I reaction center subunit, chloroplast precursor, putative, expressed K08905: photosystem I subunit V
14 Sobic.008G036350 - -
15 Sobic.007G059500 down-regulated TF in developmental senescence(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@histone-like transcription factor and archaeal histone, putative, expressed -
16 Sobic.001G177000 Chorophyll a/b binding protein(PubMedID : 26186930)@Chorophyll a/b binding protein(PubMedID : 26186930)@Light harvesting complex-II subunit B2(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08913: light-harvesting complex II chlorophyll a/b binding protein 2
17 Sobic.004G056900 Chorophyll a/b binding protein 1B-21(PubMedID : 26186930)@Light harvesting complex-I subunit A4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08907: light-harvesting complex I chlorophyll a/b binding protein 1
18 Sobic.004G182700 OsFBK8 - F-box domain and kelch repeat containing protein, expressed -
19 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
20 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase


Gene co-expression network
sample Sobic001G498300 Sobic001G498300 Sobic010G218600 Sobic010G218600 Sobic001G498300--Sobic010G218600 Sobic003G187000 Sobic003G187000 Sobic001G498300--Sobic003G187000 Sobic007G178500 Sobic007G178500 Sobic001G498300--Sobic007G178500 Sobic001G407900 Sobic001G407900 Sobic001G498300--Sobic001G407900 Sobic008G063500 Sobic008G063500 Sobic001G498300--Sobic008G063500 Sobic004G343100 Sobic004G343100 Sobic001G498300--Sobic004G343100 Sobic005G021600 Sobic005G021600 Sobic001G498300--Sobic005G021600 Sobic005G192600 Sobic005G192600 Sobic001G498300--Sobic005G192600 Sobic004G314800 Sobic004G314800 Sobic001G498300--Sobic004G314800 Sobic010G218600--Sobic001G498300 Sobic010G218600--Sobic005G021600 Sobic010G265500 Sobic010G265500 Sobic010G218600--Sobic010G265500 Sobic010G218600--Sobic007G178500 Sobic010G218600--Sobic008G063500 Sobic010G218600--Sobic001G407900 Sobic001G447700 Sobic001G447700 Sobic010G218600--Sobic001G447700 Sobic007G023300 Sobic007G023300 Sobic010G218600--Sobic007G023300 Sobic010G218600--Sobic005G192600 Sobic003G187000--Sobic007G178500 Sobic003G187000--Sobic001G498300 Sobic003G187000--Sobic010G265500 Sobic003G187000--Sobic004G314800 Sobic009G028400 Sobic009G028400 Sobic003G187000--Sobic009G028400 Sobic003G187000--Sobic004G343100 Sobic003G187000--Sobic008G063500 Sobic003G187000--Sobic005G021600 Sobic003G187000--Sobic007G023300 Sobic007G178500--Sobic007G023300 Sobic007G178500--Sobic003G187000 Sobic007G178500--Sobic008G063500 Sobic007G178500--Sobic005G021600 Sobic007G178500--Sobic001G498300 Sobic001G339100 Sobic001G339100 Sobic007G178500--Sobic001G339100 Sobic007G178500--Sobic009G028400 Sobic007G178500--Sobic010G265500 Sobic007G178500--Sobic010G218600 Sobic001G407900--Sobic007G023300 Sobic001G407900--Sobic001G339100 Sobic001G407900--Sobic001G498300 Sobic001G206200 Sobic001G206200 Sobic001G407900--Sobic001G206200 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G042301 Sobic001G042301 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic004G193400 Sobic004G193400 Sobic001G407900--Sobic004G193400 Sobic001G177000 Sobic001G177000 Sobic008G063500--Sobic001G177000 Sobic002G030200 Sobic002G030200 Sobic008G063500--Sobic002G030200 Sobic008G063500--Sobic002G242000 Sobic007G136900 Sobic007G136900 Sobic008G063500--Sobic007G136900 Sobic003G209900 Sobic003G209900 Sobic008G063500--Sobic003G209900 Sobic004G056900 Sobic004G056900 Sobic008G063500--Sobic004G056900 Sobic001G046900 Sobic001G046900 Sobic008G063500--Sobic001G046900 Sobic002G316700 Sobic002G316700 Sobic008G063500--Sobic002G316700 Sobic002G338000 Sobic002G338000 Sobic008G063500--Sobic002G338000 Sobic008G063100 Sobic008G063100 Sobic004G343100--Sobic008G063100 Sobic004G343100--Sobic010G265500 Sobic004G343100--Sobic005G021600 Sobic003G421400 Sobic003G421400 Sobic004G343100--Sobic003G421400 Sobic004G343100--Sobic001G498300 Sobic004G343100--Sobic003G187000 Sobic001G161300 Sobic001G161300 Sobic004G343100--Sobic001G161300 Sobic007G132500 Sobic007G132500 Sobic004G343100--Sobic007G132500 Sobic002G281000 Sobic002G281000 Sobic004G343100--Sobic002G281000 Sobic005G021600--Sobic008G063100 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic002G195700 Sobic002G195700 Sobic005G021600--Sobic002G195700 Sobic005G021600--Sobic007G178500 Sobic005G021600--Sobic010G218600 Sobic005G021600--Sobic002G281000 Sobic005G021600--Sobic007G132500 Sobic001G006000 Sobic001G006000 Sobic005G021600--Sobic001G006000 Sobic005G167500 Sobic005G167500 Sobic005G192600--Sobic005G167500 Sobic004G182700 Sobic004G182700 Sobic005G192600--Sobic004G182700 Sobic008G036300 Sobic008G036300 Sobic005G192600--Sobic008G036300 Sobic008G036350 Sobic008G036350 Sobic005G192600--Sobic008G036350 Sobic009G202400 Sobic009G202400 Sobic005G192600--Sobic009G202400 Sobic005G192600--Sobic001G498300 Sobic001G198800 Sobic001G198800 Sobic005G192600--Sobic001G198800 Sobic003G058001 Sobic003G058001 Sobic005G192600--Sobic003G058001 Sobic003G106500 Sobic003G106500 Sobic005G192600--Sobic003G106500 Sobic002G305700 Sobic002G305700 Sobic004G314800--Sobic002G305700 Sobic006G248200 Sobic006G248200 Sobic004G314800--Sobic006G248200 Sobic006G280050 Sobic006G280050 Sobic004G314800--Sobic006G280050 Sobic006G111600 Sobic006G111600 Sobic004G314800--Sobic006G111600 Sobic003G328200 Sobic003G328200 Sobic004G314800--Sobic003G328200 Sobic007G171800 Sobic007G171800 Sobic004G314800--Sobic007G171800 Sobic002G131700 Sobic002G131700 Sobic004G314800--Sobic002G131700 Sobic007G034500 Sobic007G034500 Sobic004G314800--Sobic007G034500 Sobic003G330100 Sobic003G330100 Sobic004G314800--Sobic003G330100
Octagon: transcription factors


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