Gene annotation
Transcriptome id Sobic.001G339100.2,Sobic.001G339100.1,Sobic.001G339100.3
Synonym Sb01g032620, G6PD2
Functional annotation glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
UniProt A0A1B6QMJ8 , A0A1B6QMK8 , A0A1B6QMK0
Pfam PF00479 PF02781 PF02781
Panther DB PTHR23429 PTHR23429:SF1
NCBI CDD -
KEGG Orthology K00036; G6PD, glucose-6-phosphate 1-dehydrogenase
Gene Ontology GO:0006006; glucose metabolic process GO:0004345glucose-6-phosphate dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT5G13110 : glucose-6-phosphate dehydrogenase 2
RAP-DB (Rice) LOC_Os03g29950.1 : glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a002849
Brachypodium KQK21299 , KQK21298 , KQK21300
Barley HORVU6Hr1G028710.14 , HORVU6Hr1G028710.15 , HORVU6Hr1G028710.16 , HORVU6Hr1G028710.10 , HORVU6Hr1G028710.11 , HORVU6Hr1G028710.12 , HORVU6Hr1G028710.13 , HORVU6Hr1G028710.3 , HORVU6Hr1G028710.6 , HORVU6Hr1G028710.7 , HORVU6Hr1G028710.4 , HORVU6Hr1G028710.5 , HORVU6Hr1G028710.2 , HORVU6Hr1G028710.1 , HORVU6Hr1G028710.8 , HORVU6Hr1G028710.9
Wheat TraesCS6D02G135800 , TraesCS6D02G135800 , TraesCS6B02G174700 , TraesCS6A02G146500
Populus -


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cDNA sequences
Sobic.001G339100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G028400 expressed protein -
2 Sobic.007G023300 photosystem II core complex proteins psbY, chloroplast precursor, putative, expressed K02723: photosystem II PsbY protein
3 Sobic.001G407900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase C, putative, expressed -
4 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
5 Sobic.007G178500 cytochrome P450, putative, expressed -
6 Sobic.005G021600 expressed protein -
7 Sobic.008G063500 Photosystem I reaction center subunit N(PubMedID : 26186930)@photosystem I reaction center subunit N, chloroplast precursor, putative, expressed K02701: photosystem I subunit PsaN
8 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
9 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
10 Sobic.007G136900 Chorophyll a/b binding protein 4(PubMedID : 26186930)@Light harvesting complex PSI subunit A4 (At)(PubMedID : 27208977)@chlorophyll A-B binding protein, putative, expressed K08910: light-harvesting complex I chlorophyll a/b binding protein 4
11 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
13 Sobic.002G065200 pentatricopeptide, putative, expressed -
14 Sobic.002G338000 Chorophyll a/b binding protein CP29.1(PubMedID : 26186930)@Chlorophyll A-B binding protein CP29 LHCB4 (At)(PubMedID : 27208977)@Light harvesting complex-II subunit B4(PubMedID : 29017446)@chlorophyll A-B binding protein, putative, expressed K08915: light-harvesting complex II chlorophyll a/b binding protein 4
15 Sobic.001G498300 galactose mutarotase-like, putative, expressed -
16 Sobic.004G193400 photosystem II 5 kDa protein, chloroplast precursor, putative, expressed -
17 Sobic.001G206200 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K00218: protochlorophyllide reductase
18 Sobic.010G218600 inactive receptor kinase At2g26730 precursor, putative, expressed -
19 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic001G339100 Sobic001G339100 Sobic009G028400 Sobic009G028400 Sobic001G339100--Sobic009G028400 Sobic007G023300 Sobic007G023300 Sobic001G339100--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G339100--Sobic001G407900 Sobic001G006000 Sobic001G006000 Sobic001G339100--Sobic001G006000 Sobic007G178500 Sobic007G178500 Sobic001G339100--Sobic007G178500 Sobic005G021600 Sobic005G021600 Sobic001G339100--Sobic005G021600 Sobic008G063500 Sobic008G063500 Sobic001G339100--Sobic008G063500 Sobic003G221700 Sobic003G221700 Sobic001G339100--Sobic003G221700 Sobic006G197700 Sobic006G197700 Sobic001G339100--Sobic006G197700 Sobic009G028400--Sobic001G006000 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic009G028400--Sobic005G021600 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic009G028400--Sobic007G178500 Sobic004G179200 Sobic004G179200 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic004G193400 Sobic004G193400 Sobic007G023300--Sobic004G193400 Sobic002G414400 Sobic002G414400 Sobic007G023300--Sobic002G414400 Sobic007G023300--Sobic001G407900 Sobic007G023300--Sobic008G063500 Sobic001G206200 Sobic001G206200 Sobic007G023300--Sobic001G206200 Sobic002G338000 Sobic002G338000 Sobic007G023300--Sobic002G338000 Sobic007G023300--Sobic001G339100 Sobic007G023300--Sobic007G178500 Sobic002G030200 Sobic002G030200 Sobic007G023300--Sobic002G030200 Sobic001G407900--Sobic007G023300 Sobic001G407900--Sobic001G339100 Sobic001G498300 Sobic001G498300 Sobic001G407900--Sobic001G498300 Sobic001G407900--Sobic001G206200 Sobic010G218600 Sobic010G218600 Sobic001G407900--Sobic010G218600 Sobic008G117400 Sobic008G117400 Sobic001G407900--Sobic008G117400 Sobic001G042301 Sobic001G042301 Sobic001G407900--Sobic001G042301 Sobic002G242000 Sobic002G242000 Sobic001G407900--Sobic002G242000 Sobic001G407900--Sobic004G193400 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic008G063200 Sobic008G063200 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G006000--Sobic001G339100 Sobic003G253300 Sobic003G253300 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800 Sobic007G178500--Sobic007G023300 Sobic003G187000 Sobic003G187000 Sobic007G178500--Sobic003G187000 Sobic007G178500--Sobic008G063500 Sobic007G178500--Sobic005G021600 Sobic007G178500--Sobic001G498300 Sobic007G178500--Sobic001G339100 Sobic007G178500--Sobic009G028400 Sobic010G265500 Sobic010G265500 Sobic007G178500--Sobic010G265500 Sobic007G178500--Sobic010G218600 Sobic008G063100 Sobic008G063100 Sobic005G021600--Sobic008G063100 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic002G195700 Sobic002G195700 Sobic005G021600--Sobic002G195700 Sobic005G021600--Sobic007G178500 Sobic005G021600--Sobic010G218600 Sobic002G281000 Sobic002G281000 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic005G021600--Sobic001G006000 Sobic001G177000 Sobic001G177000 Sobic008G063500--Sobic001G177000 Sobic008G063500--Sobic002G030200 Sobic008G063500--Sobic002G242000 Sobic007G136900 Sobic007G136900 Sobic008G063500--Sobic007G136900 Sobic003G209900 Sobic003G209900 Sobic008G063500--Sobic003G209900 Sobic004G056900 Sobic004G056900 Sobic008G063500--Sobic004G056900 Sobic001G046900 Sobic001G046900 Sobic008G063500--Sobic001G046900 Sobic002G316700 Sobic002G316700 Sobic008G063500--Sobic002G316700 Sobic008G063500--Sobic002G338000 Sobic001G333000 Sobic001G333000 Sobic003G221700--Sobic001G333000 Sobic003G221700--Sobic006G111600 Sobic003G221700--Sobic004G179200 Sobic003G221700--Sobic003G330100 Sobic002G251400 Sobic002G251400 Sobic003G221700--Sobic002G251400 Sobic002G131700 Sobic002G131700 Sobic003G221700--Sobic002G131700 Sobic003G221700--Sobic003G245800 Sobic009G234200 Sobic009G234200 Sobic003G221700--Sobic009G234200 Sobic008G072300 Sobic008G072300 Sobic003G221700--Sobic008G072300 Sobic006G197700--Sobic003G245800 Sobic002G345200 Sobic002G345200 Sobic006G197700--Sobic002G345200 Sobic006G197700--Sobic006G111600 Sobic006G197700--Sobic007G132500 Sobic003G439600 Sobic003G439600 Sobic006G197700--Sobic003G439600 Sobic006G197700--Sobic003G330100 Sobic006G197700--Sobic003G221700 Sobic002G386400 Sobic002G386400 Sobic006G197700--Sobic002G386400 Sobic002G163700 Sobic002G163700 Sobic006G197700--Sobic002G163700
Octagon: transcription factors


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