Gene annotation
Transcriptome id Sobic.009G028400.1
Synonym Sb09g002380
Functional annotation expressed protein
UniProt C5YZ57
Pfam -
Panther DB PTHR37196
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G50732 : -
RAP-DB (Rice) LOC_Os05g03750.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK07888
Barley HORVU1Hr1G015000.1 , HORVU1Hr1G015000.2
Wheat TraesCS1D02G072500 , TraesCS1B02G088400 , TraesCS1A02G069900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
2 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
3 Sobic.006G111600 cell division protease ftsH homolog 4, putative, expressed -
4 Sobic.005G021600 expressed protein -
5 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
6 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
7 Sobic.007G178500 cytochrome P450, putative, expressed -
8 Sobic.004G179200 expressed protein -
9 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
10 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
12 Sobic.003G187000 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.006G125000 expressed protein -
14 Sobic.010G265500 expressed protein -
15 Sobic.002G424100 parvulin-type peptidyl prolyl cis/trans isomerase, putative, expressed -
16 Sobic.008G063200 expressed protein -
17 Sobic.007G132500 F-box domain containing protein, expressed -
18 Sobic.004G253400 tic20 protein-related, putative, expressed -
19 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
20 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -


Gene co-expression network
sample Sobic009G028400 Sobic009G028400 Sobic001G006000 Sobic001G006000 Sobic009G028400--Sobic001G006000 Sobic001G339100 Sobic001G339100 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic005G021600 Sobic005G021600 Sobic009G028400--Sobic005G021600 Sobic003G221700 Sobic003G221700 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic007G178500 Sobic007G178500 Sobic009G028400--Sobic007G178500 Sobic004G179200 Sobic004G179200 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic010G076800 Sobic010G076800 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic008G063200 Sobic008G063200 Sobic001G006000--Sobic008G063200 Sobic007G076900 Sobic007G076900 Sobic001G006000--Sobic007G076900 Sobic001G006000--Sobic004G179200 Sobic001G006000--Sobic001G339100 Sobic003G253300 Sobic003G253300 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800 Sobic001G339100--Sobic009G028400 Sobic007G023300 Sobic007G023300 Sobic001G339100--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G339100--Sobic001G407900 Sobic001G339100--Sobic001G006000 Sobic001G339100--Sobic007G178500 Sobic001G339100--Sobic005G021600 Sobic008G063500 Sobic008G063500 Sobic001G339100--Sobic008G063500 Sobic001G339100--Sobic003G221700 Sobic006G197700 Sobic006G197700 Sobic001G339100--Sobic006G197700 Sobic006G111600--Sobic003G330100 Sobic006G111600--Sobic003G221700 Sobic002G131700 Sobic002G131700 Sobic006G111600--Sobic002G131700 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G111600--Sobic006G197700 Sobic006G111600--Sobic009G028400 Sobic008G063100 Sobic008G063100 Sobic005G021600--Sobic008G063100 Sobic010G265500 Sobic010G265500 Sobic005G021600--Sobic010G265500 Sobic005G021600--Sobic009G028400 Sobic002G195700 Sobic002G195700 Sobic005G021600--Sobic002G195700 Sobic005G021600--Sobic007G178500 Sobic010G218600 Sobic010G218600 Sobic005G021600--Sobic010G218600 Sobic002G281000 Sobic002G281000 Sobic005G021600--Sobic002G281000 Sobic007G132500 Sobic007G132500 Sobic005G021600--Sobic007G132500 Sobic005G021600--Sobic001G006000 Sobic001G333000 Sobic001G333000 Sobic003G221700--Sobic001G333000 Sobic003G221700--Sobic006G111600 Sobic003G221700--Sobic004G179200 Sobic003G221700--Sobic003G330100 Sobic002G251400 Sobic002G251400 Sobic003G221700--Sobic002G251400 Sobic003G221700--Sobic002G131700 Sobic003G221700--Sobic003G245800 Sobic003G221700--Sobic009G234200 Sobic008G072300 Sobic008G072300 Sobic003G221700--Sobic008G072300 Sobic003G330100--Sobic006G111600 Sobic003G330100--Sobic002G131700 Sobic003G330100--Sobic004G250200 Sobic003G330100--Sobic009G234200 Sobic003G330100--Sobic003G221700 Sobic003G330100--Sobic008G072300 Sobic006G204100 Sobic006G204100 Sobic003G330100--Sobic006G204100 Sobic003G330100--Sobic010G183400 Sobic002G345200 Sobic002G345200 Sobic003G330100--Sobic002G345200 Sobic007G178500--Sobic007G023300 Sobic003G187000 Sobic003G187000 Sobic007G178500--Sobic003G187000 Sobic007G178500--Sobic008G063500 Sobic007G178500--Sobic005G021600 Sobic001G498300 Sobic001G498300 Sobic007G178500--Sobic001G498300 Sobic007G178500--Sobic001G339100 Sobic007G178500--Sobic009G028400 Sobic007G178500--Sobic010G265500 Sobic007G178500--Sobic010G218600 Sobic004G179200--Sobic002G131700 Sobic004G179200--Sobic003G221700 Sobic002G297400 Sobic002G297400 Sobic004G179200--Sobic002G297400 Sobic001G469933 Sobic001G469933 Sobic004G179200--Sobic001G469933 Sobic003G439000 Sobic003G439000 Sobic004G179200--Sobic003G439000 Sobic004G179200--Sobic006G111600 Sobic004G179200--Sobic009G234200 Sobic005G002900 Sobic005G002900 Sobic004G179200--Sobic005G002900 Sobic004G179200--Sobic003G330100 Sobic001G424300 Sobic001G424300 Sobic003G310100--Sobic001G424300 Sobic002G056800 Sobic002G056800 Sobic003G310100--Sobic002G056800 Sobic001G196200 Sobic001G196200 Sobic003G310100--Sobic001G196200 Sobic001G489800 Sobic001G489800 Sobic003G310100--Sobic001G489800 Sobic001G437200 Sobic001G437200 Sobic003G310100--Sobic001G437200 Sobic001G281500 Sobic001G281500 Sobic003G310100--Sobic001G281500 Sobic006G237100 Sobic006G237100 Sobic003G310100--Sobic006G237100 Sobic002G424100 Sobic002G424100 Sobic003G310100--Sobic002G424100 Sobic003G310100--Sobic006G111600
Octagon: transcription factors


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