Gene annotation
Transcriptome id Sobic.006G111600.1
Synonym Sb06g019360
Functional annotation cell division protease ftsH homolog 4, putative, expressed
UniProt A0A1B6PLF6
Pfam PF00004 PF06480
Panther DB PTHR23076:SF61 PTHR23076
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004222; metalloendopeptidase activity GO:0005524ATP binding GO:0008270zinc ion binding GO:0016021integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G02450 : cell division protein ftsH, putative
RAP-DB (Rice) LOC_Os04g39190.1 : cell division protease ftsH homolog 4, putative, expressed
MaizeGDB (Corn) Zm00025a012970 , Zm00025a011077 , Zm00025a002144
Brachypodium KQJ83047 , KQJ83046
Barley HORVU2Hr1G081320.6 , HORVU2Hr1G081320.7 , HORVU2Hr1G081320.4 , HORVU2Hr1G081320.5 , HORVU2Hr1G081320.2 , HORVU2Hr1G081320.3
Wheat TraesCS2D02G328700 , TraesCS2B02G347700 , TraesCS2A02G334500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G330100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast ribonuclease III domain protein, putative, expressed -
2 Sobic.003G221700 psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed -
3 Sobic.002G131700 RNA recognition motif containing protein, putative, expressed -
4 Sobic.004G179200 expressed protein -
5 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
6 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -
7 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
8 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
9 Sobic.009G028400 expressed protein -
10 Sobic.007G171800 RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
11 Sobic.002G251400 expressed protein -
12 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
13 Sobic.004G314800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G196200 CRS1/YhbY domain containing protein, expressed -
15 Sobic.008G072300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
16 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
17 Sobic.007G132500 F-box domain containing protein, expressed -
18 Sobic.003G310100 ABC transporter, ATP-binding protein, putative, expressed -
19 Sobic.002G345200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G131600 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial


Gene co-expression network
sample Sobic006G111600 Sobic006G111600 Sobic003G330100 Sobic003G330100 Sobic006G111600--Sobic003G330100 Sobic003G221700 Sobic003G221700 Sobic006G111600--Sobic003G221700 Sobic002G131700 Sobic002G131700 Sobic006G111600--Sobic002G131700 Sobic004G179200 Sobic004G179200 Sobic006G111600--Sobic004G179200 Sobic009G234200 Sobic009G234200 Sobic006G111600--Sobic009G234200 Sobic004G250200 Sobic004G250200 Sobic006G111600--Sobic004G250200 Sobic010G183400 Sobic010G183400 Sobic006G111600--Sobic010G183400 Sobic006G197700 Sobic006G197700 Sobic006G111600--Sobic006G197700 Sobic009G028400 Sobic009G028400 Sobic006G111600--Sobic009G028400 Sobic003G330100--Sobic006G111600 Sobic003G330100--Sobic002G131700 Sobic003G330100--Sobic004G250200 Sobic003G330100--Sobic009G234200 Sobic003G330100--Sobic003G221700 Sobic008G072300 Sobic008G072300 Sobic003G330100--Sobic008G072300 Sobic006G204100 Sobic006G204100 Sobic003G330100--Sobic006G204100 Sobic003G330100--Sobic010G183400 Sobic002G345200 Sobic002G345200 Sobic003G330100--Sobic002G345200 Sobic001G333000 Sobic001G333000 Sobic003G221700--Sobic001G333000 Sobic003G221700--Sobic006G111600 Sobic003G221700--Sobic004G179200 Sobic003G221700--Sobic003G330100 Sobic002G251400 Sobic002G251400 Sobic003G221700--Sobic002G251400 Sobic003G221700--Sobic002G131700 Sobic003G245800 Sobic003G245800 Sobic003G221700--Sobic003G245800 Sobic003G221700--Sobic009G234200 Sobic003G221700--Sobic008G072300 Sobic002G131700--Sobic004G179200 Sobic002G131700--Sobic003G330100 Sobic002G131700--Sobic006G111600 Sobic007G171800 Sobic007G171800 Sobic002G131700--Sobic007G171800 Sobic005G002900 Sobic005G002900 Sobic002G131700--Sobic005G002900 Sobic010G035200 Sobic010G035200 Sobic002G131700--Sobic010G035200 Sobic002G131700--Sobic003G221700 Sobic001G469933 Sobic001G469933 Sobic002G131700--Sobic001G469933 Sobic001G083100 Sobic001G083100 Sobic002G131700--Sobic001G083100 Sobic004G179200--Sobic002G131700 Sobic004G179200--Sobic003G221700 Sobic002G297400 Sobic002G297400 Sobic004G179200--Sobic002G297400 Sobic004G179200--Sobic001G469933 Sobic003G439000 Sobic003G439000 Sobic004G179200--Sobic003G439000 Sobic004G179200--Sobic006G111600 Sobic004G179200--Sobic009G234200 Sobic004G179200--Sobic005G002900 Sobic004G179200--Sobic003G330100 Sobic001G388400 Sobic001G388400 Sobic009G234200--Sobic001G388400 Sobic010G028000 Sobic010G028000 Sobic009G234200--Sobic010G028000 Sobic009G234200--Sobic010G183400 Sobic009G234200--Sobic003G330100 Sobic009G234200--Sobic004G250200 Sobic009G234200--Sobic006G204100 Sobic009G234200--Sobic003G245800 Sobic009G234200--Sobic006G111600 Sobic009G234200--Sobic004G179200 Sobic004G250200--Sobic003G330100 Sobic004G250200--Sobic010G183400 Sobic004G250200--Sobic003G245800 Sobic004G250200--Sobic009G234200 Sobic004G250200--Sobic006G111600 Sobic004G250200--Sobic002G345200 Sobic005G028900 Sobic005G028900 Sobic004G250200--Sobic005G028900 Sobic004G250200--Sobic003G221700 Sobic003G444500 Sobic003G444500 Sobic004G250200--Sobic003G444500 Sobic010G183400--Sobic009G234200 Sobic010G183400--Sobic004G250200 Sobic004G333400 Sobic004G333400 Sobic010G183400--Sobic004G333400 Sobic010G183400--Sobic003G245800 Sobic003G334100 Sobic003G334100 Sobic010G183400--Sobic003G334100 Sobic010G183400--Sobic003G330100 Sobic001G450600 Sobic001G450600 Sobic010G183400--Sobic001G450600 Sobic003G439600 Sobic003G439600 Sobic010G183400--Sobic003G439600 Sobic010G183400--Sobic005G028900 Sobic006G197700--Sobic003G245800 Sobic006G197700--Sobic002G345200 Sobic006G197700--Sobic006G111600 Sobic007G132500 Sobic007G132500 Sobic006G197700--Sobic007G132500 Sobic006G197700--Sobic003G439600 Sobic006G197700--Sobic003G330100 Sobic006G197700--Sobic003G221700 Sobic002G386400 Sobic002G386400 Sobic006G197700--Sobic002G386400 Sobic002G163700 Sobic002G163700 Sobic006G197700--Sobic002G163700 Sobic001G006000 Sobic001G006000 Sobic009G028400--Sobic001G006000 Sobic001G339100 Sobic001G339100 Sobic009G028400--Sobic001G339100 Sobic009G028400--Sobic006G111600 Sobic005G021600 Sobic005G021600 Sobic009G028400--Sobic005G021600 Sobic009G028400--Sobic003G221700 Sobic009G028400--Sobic003G330100 Sobic007G178500 Sobic007G178500 Sobic009G028400--Sobic007G178500 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100
Octagon: transcription factors


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