Gene annotation
Transcriptome id Sobic.007G076900.1
Synonym MAP1C, Sb07g006180, MAP1B
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt A0A1B6PG96
Pfam PF00557
Panther DB PTHR10804 PTHR10804:SF104
NCBI CDD KOG2738; Putative methionine aminopeptidase
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13270 : methionine aminopeptidase 1B
RAP-DB (Rice) LOC_Os04g52100.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029908
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
2 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
3 Sobic.008G063200 expressed protein -
4 Sobic.005G111500 FHA domain containing protein, putative, expressed -
5 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
6 Sobic.009G028400 expressed protein -
7 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
8 Sobic.001G525900 homeobox domain containing protein, expressed -
9 Sobic.001G339100 glucose-6-phosphate 1-dehydrogenase, chloroplast precursor, putative, expressed K00036: G6PD, glucose-6-phosphate 1-dehydrogenase
10 Sobic.006G214700 APO, putative, expressed -
11 Sobic.006G197700 Unnamed(PubMedID : 24676859)@RNA recognition motif containing protein, putative, expressed -
12 Sobic.003G439600 amino acid kinase, putative, expressed K09903: uridylate kinase
13 Sobic.009G234200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@16S rRNA processing protein RimM containing protein, expressed -
14 Sobic.001G388400 expressed protein -
15 Sobic.004G224500 OsClp3 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
16 Sobic.003G245800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoglycerate mutase, putative, expressed -
17 Sobic.005G021600 expressed protein -
18 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
19 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
20 Sobic.003G292600 HPT phosphotransmitter 4(PubMedID : 26465154)@Positive cytokinine regulator(PubMedID : 30367619)@histidine-containing phosphotransfer protein, putative, expressed K14490: histidine-containing phosphotransfer peotein


Gene co-expression network
sample Sobic007G076900 Sobic007G076900 Sobic010G076800 Sobic010G076800 Sobic007G076900--Sobic010G076800 Sobic001G006000 Sobic001G006000 Sobic007G076900--Sobic001G006000 Sobic008G063200 Sobic008G063200 Sobic007G076900--Sobic008G063200 Sobic005G111500 Sobic005G111500 Sobic007G076900--Sobic005G111500 Sobic003G179400 Sobic003G179400 Sobic007G076900--Sobic003G179400 Sobic009G028400 Sobic009G028400 Sobic007G076900--Sobic009G028400 Sobic009G062500 Sobic009G062500 Sobic007G076900--Sobic009G062500 Sobic001G525900 Sobic001G525900 Sobic007G076900--Sobic001G525900 Sobic001G339100 Sobic001G339100 Sobic007G076900--Sobic001G339100 Sobic002G331800 Sobic002G331800 Sobic010G076800--Sobic002G331800 Sobic010G076800--Sobic001G006000 Sobic010G076800--Sobic007G076900 Sobic006G214700 Sobic006G214700 Sobic010G076800--Sobic006G214700 Sobic010G076800--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic003G037300 Sobic003G037300 Sobic010G076800--Sobic003G037300 Sobic010G076800--Sobic003G179400 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic001G006000--Sobic007G076900 Sobic004G179200 Sobic004G179200 Sobic001G006000--Sobic004G179200 Sobic001G006000--Sobic001G339100 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800 Sobic001G450600 Sobic001G450600 Sobic008G063200--Sobic001G450600 Sobic006G110900 Sobic006G110900 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic008G063200--Sobic001G006000 Sobic002G102200 Sobic002G102200 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic005G111500--Sobic010G076800 Sobic008G183200 Sobic008G183200 Sobic005G111500--Sobic008G183200 Sobic005G111500--Sobic009G062500 Sobic005G111500--Sobic008G063200 Sobic005G111500--Sobic002G102200 Sobic005G111500--Sobic007G076900 Sobic001G186200 Sobic001G186200 Sobic005G111500--Sobic001G186200 Sobic005G111500--Sobic001G006000 Sobic005G111500--Sobic003G037300 Sobic003G179400--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic003G179400--Sobic010G231100 Sobic005G028900 Sobic005G028900 Sobic003G179400--Sobic005G028900 Sobic003G179400--Sobic010G076800 Sobic003G179400--Sobic004G333400 Sobic003G179400--Sobic001G450600 Sobic003G179400--Sobic008G063200 Sobic003G179400--Sobic002G331800 Sobic003G179400--Sobic006G110900 Sobic009G028400--Sobic001G006000 Sobic009G028400--Sobic001G339100 Sobic006G111600 Sobic006G111600 Sobic009G028400--Sobic006G111600 Sobic005G021600 Sobic005G021600 Sobic009G028400--Sobic005G021600 Sobic003G221700 Sobic003G221700 Sobic009G028400--Sobic003G221700 Sobic003G330100 Sobic003G330100 Sobic009G028400--Sobic003G330100 Sobic007G178500 Sobic007G178500 Sobic009G028400--Sobic007G178500 Sobic009G028400--Sobic004G179200 Sobic003G310100 Sobic003G310100 Sobic009G028400--Sobic003G310100 Sobic009G062500--Sobic005G111500 Sobic009G062500--Sobic007G076900 Sobic008G101400 Sobic008G101400 Sobic009G062500--Sobic008G101400 Sobic009G062500--Sobic008G183200 Sobic008G015100 Sobic008G015100 Sobic009G062500--Sobic008G015100 Sobic008G072700 Sobic008G072700 Sobic009G062500--Sobic008G072700 Sobic009G062500--Sobic010G076800 Sobic004G201700 Sobic004G201700 Sobic009G062500--Sobic004G201700 Sobic009G062500--Sobic001G525900 Sobic002G281000 Sobic002G281000 Sobic001G525900--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic001G525900--Sobic001G404500 Sobic001G019300 Sobic001G019300 Sobic001G525900--Sobic001G019300 Sobic001G525900--Sobic005G021600 Sobic006G164300 Sobic006G164300 Sobic001G525900--Sobic006G164300 Sobic001G048000 Sobic001G048000 Sobic001G525900--Sobic001G048000 Sobic008G063100 Sobic008G063100 Sobic001G525900--Sobic008G063100 Sobic004G063200 Sobic004G063200 Sobic001G525900--Sobic004G063200 Sobic001G321600 Sobic001G321600 Sobic001G525900--Sobic001G321600 Sobic001G339100--Sobic009G028400 Sobic007G023300 Sobic007G023300 Sobic001G339100--Sobic007G023300 Sobic001G407900 Sobic001G407900 Sobic001G339100--Sobic001G407900 Sobic001G339100--Sobic001G006000 Sobic001G339100--Sobic007G178500 Sobic001G339100--Sobic005G021600 Sobic008G063500 Sobic008G063500 Sobic001G339100--Sobic008G063500 Sobic001G339100--Sobic003G221700 Sobic006G197700 Sobic006G197700 Sobic001G339100--Sobic006G197700
Octagon: transcription factors


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