Gene annotation
Transcriptome id Sobic.005G111500.1,Sobic.005G111500.2
Synonym Sb05g013170
Functional annotation FHA domain containing protein, putative, expressed
UniProt A0A1Z5RJ03 , A0A1Z5RI50
Pfam PF00498
Panther DB PTHR21712 PTHR21712:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G07220 : SMAD/FHA domain-containing protein
RAP-DB (Rice) LOC_Os08g41710.1 : FHA domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029766
Brachypodium KQJ88542
Barley HORVU7Hr1G053830.3 , HORVU7Hr1G053830.1 , HORVU7Hr1G053830.2
Wheat TraesCS7D02G259600 , TraesCS7A02G258700 , TraesCS7B02G156300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
2 Sobic.008G183200 LOL3, putative, expressed -
3 Sobic.009G062500 -(PubMedID : 26976818)@triose phosphate/phosphate translocator, non-green plastid,chloroplast precursor, putative, expressed K15283: solute carrier family 35, member E1
4 Sobic.008G063200 expressed protein -
5 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
6 Sobic.007G076900 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
7 Sobic.001G186200 pentatricopeptide, putative, expressed -
8 Sobic.001G006000 PPR repeat domain containing protein, putative, expressed -
9 Sobic.003G037300 Twin LOV 1, putative, expressed -
10 Sobic.004G298900 OR, putative, expressed -
11 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
12 Sobic.001G168800 BTBN7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
13 Sobic.008G078900 NADP-dependent oxidoreductase, putative, expressed K07119: PTGR3, prostaglandin reductase 3
14 Sobic.001G242600 thaumatin family domain containing protein, expressed -
15 Sobic.006G101500 expressed protein -
16 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
17 Sobic.005G127000 Upregulated in cold susceptible sorghum under stress(PubMedID : 26645959)@cytochrome P450, putative, expressed -
18 Sobic.008G015100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@OsGH3.8 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.010G241300 -(PubMedID : 26465154)@OsCML29 - Calmodulin-related calcium sensor protein, expressed -
20 Sobic.007G223500 expressed protein -


Gene co-expression network
sample Sobic005G111500 Sobic005G111500 Sobic010G076800 Sobic010G076800 Sobic005G111500--Sobic010G076800 Sobic008G183200 Sobic008G183200 Sobic005G111500--Sobic008G183200 Sobic009G062500 Sobic009G062500 Sobic005G111500--Sobic009G062500 Sobic008G063200 Sobic008G063200 Sobic005G111500--Sobic008G063200 Sobic002G102200 Sobic002G102200 Sobic005G111500--Sobic002G102200 Sobic007G076900 Sobic007G076900 Sobic005G111500--Sobic007G076900 Sobic001G186200 Sobic001G186200 Sobic005G111500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic005G111500--Sobic001G006000 Sobic003G037300 Sobic003G037300 Sobic005G111500--Sobic003G037300 Sobic002G331800 Sobic002G331800 Sobic010G076800--Sobic002G331800 Sobic010G076800--Sobic001G006000 Sobic010G076800--Sobic007G076900 Sobic006G214700 Sobic006G214700 Sobic010G076800--Sobic006G214700 Sobic010G076800--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic010G076800--Sobic003G037300 Sobic003G179400 Sobic003G179400 Sobic010G076800--Sobic003G179400 Sobic004G122200 Sobic004G122200 Sobic008G183200--Sobic004G122200 Sobic010G241300 Sobic010G241300 Sobic008G183200--Sobic010G241300 Sobic005G127000 Sobic005G127000 Sobic008G183200--Sobic005G127000 Sobic008G183200--Sobic005G111500 Sobic007G059500 Sobic007G059500 Sobic008G183200--Sobic007G059500 Sobic003G110700 Sobic003G110700 Sobic008G183200--Sobic003G110700 Sobic001G377500 Sobic001G377500 Sobic008G183200--Sobic001G377500 Sobic010G164200 Sobic010G164200 Sobic008G183200--Sobic010G164200 Sobic006G102400 Sobic006G102400 Sobic008G183200--Sobic006G102400 Sobic009G062500--Sobic005G111500 Sobic009G062500--Sobic007G076900 Sobic008G101400 Sobic008G101400 Sobic009G062500--Sobic008G101400 Sobic009G062500--Sobic008G183200 Sobic008G015100 Sobic008G015100 Sobic009G062500--Sobic008G015100 Sobic008G072700 Sobic008G072700 Sobic009G062500--Sobic008G072700 Sobic009G062500--Sobic010G076800 Sobic004G201700 Sobic004G201700 Sobic009G062500--Sobic004G201700 Sobic001G525900 Sobic001G525900 Sobic009G062500--Sobic001G525900 Sobic001G450600 Sobic001G450600 Sobic008G063200--Sobic001G450600 Sobic006G110900 Sobic006G110900 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic008G063200--Sobic001G006000 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic003G387100 Sobic003G387100 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic002G102200--Sobic008G063200 Sobic009G059300 Sobic009G059300 Sobic002G102200--Sobic009G059300 Sobic007G076900--Sobic010G076800 Sobic007G076900--Sobic001G006000 Sobic007G076900--Sobic008G063200 Sobic007G076900--Sobic005G111500 Sobic007G076900--Sobic003G179400 Sobic009G028400 Sobic009G028400 Sobic007G076900--Sobic009G028400 Sobic007G076900--Sobic009G062500 Sobic007G076900--Sobic001G525900 Sobic001G339100 Sobic001G339100 Sobic007G076900--Sobic001G339100 Sobic007G085800 Sobic007G085800 Sobic001G186200--Sobic007G085800 Sobic003G439000 Sobic003G439000 Sobic001G186200--Sobic003G439000 Sobic001G455500 Sobic001G455500 Sobic001G186200--Sobic001G455500 Sobic006G210400 Sobic006G210400 Sobic001G186200--Sobic006G210400 Sobic001G186200--Sobic003G342200 Sobic001G186200--Sobic008G063200 Sobic001G186200--Sobic005G111500 Sobic001G168800 Sobic001G168800 Sobic001G186200--Sobic001G168800 Sobic001G186200--Sobic001G450600 Sobic001G006000--Sobic010G076800 Sobic001G006000--Sobic009G028400 Sobic004G253400 Sobic004G253400 Sobic001G006000--Sobic004G253400 Sobic001G006000--Sobic008G063200 Sobic001G006000--Sobic007G076900 Sobic004G179200 Sobic004G179200 Sobic001G006000--Sobic004G179200 Sobic001G006000--Sobic001G339100 Sobic001G006000--Sobic003G253300 Sobic003G245800 Sobic003G245800 Sobic001G006000--Sobic003G245800 Sobic004G298900 Sobic004G298900 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic003G037300--Sobic008G006100 Sobic010G269400 Sobic010G269400 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic001G286600 Sobic001G286600 Sobic003G037300--Sobic001G286600
Octagon: transcription factors


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