Gene annotation
Transcriptome id Sobic.001G242600.1
Synonym Sb01g021450
Functional annotation thaumatin family domain containing protein, expressed
UniProt C5X1F0
Pfam PF00314
Panther DB PTHR31048 PTHR31048:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28790 : Pathogenesis-related thaumatin superfamily protein
RAP-DB (Rice) LOC_Os11g47670.1 : thaumatin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029100 , Zm00025a025407 , Zm00025a006871 , Zm00025a006880
Brachypodium -
Barley HORVU5Hr1G021390.1 , HORVU4Hr1G028150.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G391900 nifU, putative, expressed -
2 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
4 Sobic.003G392700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
5 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
6 Sobic.005G111500 FHA domain containing protein, putative, expressed -
7 Sobic.006G210400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
8 Sobic.004G298900 OR, putative, expressed -
9 Sobic.001G186200 pentatricopeptide, putative, expressed -
10 Sobic.007G085800 cycloartenol synthase, putative, expressed K19011: achilleol B synthase
11 Sobic.008G116300 expressed protein -
12 Sobic.003G342200 dihydroflavonol-4-reductase, putative, expressed -
13 Sobic.009G029001 - -
14 Sobic.006G101500 expressed protein -
15 Sobic.002G316700 ATP synthase subunit gamma(PubMedID : 26186930)@ATP synthase subunit gamma (Zm)(PubMedID : 27208977)@ATP synthase gamma chain, putative, expressed K02115: ATPF1G, F-type H+-transporting ATPase subunit gamma
16 Sobic.003G254600 expressed protein -
17 Sobic.003G037300 Twin LOV 1, putative, expressed -
18 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
19 Sobic.007G223500 expressed protein -
20 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase


Gene co-expression network
sample Sobic001G242600 Sobic001G242600 Sobic001G391900 Sobic001G391900 Sobic001G242600--Sobic001G391900 Sobic002G102200 Sobic002G102200 Sobic001G242600--Sobic002G102200 Sobic006G260800 Sobic006G260800 Sobic001G242600--Sobic006G260800 Sobic003G392700 Sobic003G392700 Sobic001G242600--Sobic003G392700 Sobic004G227200 Sobic004G227200 Sobic001G242600--Sobic004G227200 Sobic005G111500 Sobic005G111500 Sobic001G242600--Sobic005G111500 Sobic006G210400 Sobic006G210400 Sobic001G242600--Sobic006G210400 Sobic004G298900 Sobic004G298900 Sobic001G242600--Sobic004G298900 Sobic001G186200 Sobic001G186200 Sobic001G242600--Sobic001G186200 Sobic001G391900--Sobic002G102200 Sobic006G093900 Sobic006G093900 Sobic001G391900--Sobic006G093900 Sobic002G030500 Sobic002G030500 Sobic001G391900--Sobic002G030500 Sobic002G036000 Sobic002G036000 Sobic001G391900--Sobic002G036000 Sobic006G188000 Sobic006G188000 Sobic001G391900--Sobic006G188000 Sobic009G059300 Sobic009G059300 Sobic001G391900--Sobic009G059300 Sobic001G102800 Sobic001G102800 Sobic001G391900--Sobic001G102800 Sobic001G391900--Sobic004G227200 Sobic003G387100 Sobic003G387100 Sobic001G391900--Sobic003G387100 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic006G260800--Sobic004G298900 Sobic010G214100 Sobic010G214100 Sobic006G260800--Sobic010G214100 Sobic002G112400 Sobic002G112400 Sobic006G260800--Sobic002G112400 Sobic005G111550 Sobic005G111550 Sobic006G260800--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic006G260800--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic006G260800--Sobic009G062400 Sobic005G001700 Sobic005G001700 Sobic006G260800--Sobic005G001700 Sobic004G211600 Sobic004G211600 Sobic006G260800--Sobic004G211600 Sobic009G140000 Sobic009G140000 Sobic006G260800--Sobic009G140000 Sobic003G392700--Sobic001G242600 Sobic005G097800 Sobic005G097800 Sobic003G392700--Sobic005G097800 Sobic009G189000 Sobic009G189000 Sobic003G392700--Sobic009G189000 Sobic001G404500 Sobic001G404500 Sobic003G392700--Sobic001G404500 Sobic006G123500 Sobic006G123500 Sobic003G392700--Sobic006G123500 Sobic004G268500 Sobic004G268500 Sobic003G392700--Sobic004G268500 Sobic006G055000 Sobic006G055000 Sobic003G392700--Sobic006G055000 Sobic004G063200 Sobic004G063200 Sobic003G392700--Sobic004G063200 Sobic002G281000 Sobic002G281000 Sobic003G392700--Sobic002G281000 Sobic007G223500 Sobic007G223500 Sobic004G227200--Sobic007G223500 Sobic004G227200--Sobic006G093900 Sobic002G316700 Sobic002G316700 Sobic004G227200--Sobic002G316700 Sobic001G035800 Sobic001G035800 Sobic004G227200--Sobic001G035800 Sobic009G143100 Sobic009G143100 Sobic004G227200--Sobic009G143100 Sobic001G168800 Sobic001G168800 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic004G227200--Sobic003G387800 Sobic004G227200--Sobic002G030500 Sobic010G076800 Sobic010G076800 Sobic005G111500--Sobic010G076800 Sobic008G183200 Sobic008G183200 Sobic005G111500--Sobic008G183200 Sobic009G062500 Sobic009G062500 Sobic005G111500--Sobic009G062500 Sobic005G111500--Sobic008G063200 Sobic005G111500--Sobic002G102200 Sobic007G076900 Sobic007G076900 Sobic005G111500--Sobic007G076900 Sobic005G111500--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic005G111500--Sobic001G006000 Sobic003G037300 Sobic003G037300 Sobic005G111500--Sobic003G037300 Sobic006G010900 Sobic006G010900 Sobic006G210400--Sobic006G010900 Sobic007G085800 Sobic007G085800 Sobic006G210400--Sobic007G085800 Sobic006G256600 Sobic006G256600 Sobic006G210400--Sobic006G256600 Sobic003G141100 Sobic003G141100 Sobic006G210400--Sobic003G141100 Sobic002G297400 Sobic002G297400 Sobic006G210400--Sobic002G297400 Sobic006G210400--Sobic003G387100 Sobic001G309300 Sobic001G309300 Sobic006G210400--Sobic001G309300 Sobic010G255100 Sobic010G255100 Sobic006G210400--Sobic010G255100 Sobic006G210400--Sobic001G124800 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic001G186200--Sobic007G085800 Sobic003G439000 Sobic003G439000 Sobic001G186200--Sobic003G439000 Sobic001G455500 Sobic001G455500 Sobic001G186200--Sobic001G455500 Sobic001G186200--Sobic006G210400 Sobic003G342200 Sobic003G342200 Sobic001G186200--Sobic003G342200 Sobic001G186200--Sobic008G063200 Sobic001G186200--Sobic005G111500 Sobic001G186200--Sobic001G168800 Sobic001G450600 Sobic001G450600 Sobic001G186200--Sobic001G450600
Octagon: transcription factors


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