Gene annotation
Transcriptome id Sobic.006G260800.2
Synonym Sb06g032370, VTE5
Functional annotation phosphatidate cytidylyltransferase, putative, expressed
UniProt A0A1B6PNR8
Pfam -
Panther DB PTHR32523
NCBI CDD KOG4453; Predicted ER membrane protein
KEGG Orthology K18678; phytol kinase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04490 : vitamin E pathway gene 5
RAP-DB (Rice) LOC_Os04g57500.1 : phosphatidate cytidylyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a009369
Brachypodium -
Barley -
Wheat TraesCS2B02G577700
Populus -


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cDNA sequences
Sobic.006G260800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G298900 OR, putative, expressed -
2 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
3 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
4 Sobic.005G111550 - -
5 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
7 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
8 Sobic.004G211600 psaB translation factor, putative, expressed -
9 Sobic.009G140000 MLO domain containing protein, putative, expressed K08472: mlo protein
10 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
11 Sobic.001G521200 expressed protein -
12 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
13 Sobic.006G101500 expressed protein -
14 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
15 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
16 Sobic.008G006100 MATE efflux protein, putative, expressed -
17 Sobic.003G037300 Twin LOV 1, putative, expressed -
18 Sobic.002G220900 expressed protein -
19 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
20 Sobic.001G242600 thaumatin family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G260800 Sobic006G260800 Sobic004G298900 Sobic004G298900 Sobic006G260800--Sobic004G298900 Sobic010G214100 Sobic010G214100 Sobic006G260800--Sobic010G214100 Sobic002G112400 Sobic002G112400 Sobic006G260800--Sobic002G112400 Sobic005G111550 Sobic005G111550 Sobic006G260800--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic006G260800--Sobic003G160800 Sobic009G062400 Sobic009G062400 Sobic006G260800--Sobic009G062400 Sobic005G001700 Sobic005G001700 Sobic006G260800--Sobic005G001700 Sobic004G211600 Sobic004G211600 Sobic006G260800--Sobic004G211600 Sobic009G140000 Sobic009G140000 Sobic006G260800--Sobic009G140000 Sobic003G037300 Sobic003G037300 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic004G298900--Sobic006G260800 Sobic006G101500 Sobic006G101500 Sobic010G214100--Sobic006G101500 Sobic010G214100--Sobic003G160800 Sobic003G387100 Sobic003G387100 Sobic010G214100--Sobic003G387100 Sobic005G063000 Sobic005G063000 Sobic010G214100--Sobic005G063000 Sobic009G125400 Sobic009G125400 Sobic010G214100--Sobic009G125400 Sobic007G085800 Sobic007G085800 Sobic010G214100--Sobic007G085800 Sobic010G214100--Sobic004G211600 Sobic008G116300 Sobic008G116300 Sobic010G214100--Sobic008G116300 Sobic007G052400 Sobic007G052400 Sobic010G214100--Sobic007G052400 Sobic001G128600 Sobic001G128600 Sobic002G112400--Sobic001G128600 Sobic002G112400--Sobic008G006100 Sobic002G112400--Sobic003G160800 Sobic002G112400--Sobic009G062400 Sobic006G265900 Sobic006G265900 Sobic002G112400--Sobic006G265900 Sobic001G122300 Sobic001G122300 Sobic002G112400--Sobic001G122300 Sobic009G056700 Sobic009G056700 Sobic002G112400--Sobic009G056700 Sobic009G237000 Sobic009G237000 Sobic002G112400--Sobic009G237000 Sobic002G112400--Sobic003G387100 Sobic003G085100 Sobic003G085100 Sobic005G111550--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic005G111550--Sobic003G150800 Sobic002G042500 Sobic002G042500 Sobic005G111550--Sobic002G042500 Sobic005G111550--Sobic003G160800 Sobic001G500600 Sobic001G500600 Sobic005G111550--Sobic001G500600 Sobic001G037500 Sobic001G037500 Sobic005G111550--Sobic001G037500 Sobic005G111550--Sobic004G298900 Sobic005G111550--Sobic005G063000 Sobic001G465700 Sobic001G465700 Sobic005G111550--Sobic001G465700 Sobic004G336200 Sobic004G336200 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic010G035400 Sobic010G035400 Sobic003G160800--Sobic010G035400 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic003G160800--Sobic002G112400 Sobic003G233700 Sobic003G233700 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic009G062400--Sobic008G006100 Sobic009G062400--Sobic002G112400 Sobic009G207900 Sobic009G207900 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic009G062400--Sobic003G037300 Sobic004G154400 Sobic004G154400 Sobic009G062400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic008G001900 Sobic008G001900 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G204200 Sobic005G204200 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G001700--Sobic005G063000 Sobic003G185900 Sobic003G185900 Sobic005G001700--Sobic003G185900 Sobic002G402700 Sobic002G402700 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200 Sobic004G211600--Sobic006G101500 Sobic004G211600--Sobic005G063000 Sobic001G183000 Sobic001G183000 Sobic004G211600--Sobic001G183000 Sobic004G211600--Sobic010G214100 Sobic004G211600--Sobic008G006100 Sobic004G211600--Sobic001G134700 Sobic004G211600--Sobic009G062400 Sobic004G211600--Sobic004G298900 Sobic004G211600--Sobic003G160800 Sobic009G140000--Sobic006G260800 Sobic009G140000--Sobic005G001700 Sobic006G055000 Sobic006G055000 Sobic009G140000--Sobic006G055000 Sobic009G140000--Sobic009G062400 Sobic001G517700 Sobic001G517700 Sobic009G140000--Sobic001G517700 Sobic002G403600 Sobic002G403600 Sobic009G140000--Sobic002G403600 Sobic009G123900 Sobic009G123900 Sobic009G140000--Sobic009G123900 Sobic008G052900 Sobic008G052900 Sobic009G140000--Sobic008G052900 Sobic009G140000--Sobic009G219100
Octagon: transcription factors


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