Gene annotation
Transcriptome id Sobic.003G345500.1
Synonym Sb03g038920
Functional annotation ureidoglycolate hydrolase, putative, expressed
UniProt C5XP08
Pfam -
Panther DB PTHR35721 PTHR35721:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35820 : ureidoglycolate hydrolases
RAP-DB (Rice) LOC_Os01g61670.1 : ureidoglycolate hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a026990
Brachypodium KQK10436
Barley HORVU3Hr1G087450.3 , HORVU3Hr1G087450.2 , HORVU3Hr1G087450.1
Wheat TraesCS3A02G351800 , TraesCS3A02G351800 , TraesCS3D02G346000 , TraesCS3A02G352000 , TraesCS3B02G384500 , TraesCS3B02G384600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
2 Sobic.001G504400 expressed protein -
3 Sobic.008G006100 MATE efflux protein, putative, expressed -
4 Sobic.009G207900 expressed protein -
5 Sobic.007G103400 expressed protein -
6 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
7 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
8 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
9 Sobic.009G237000 OsDegp9 - Putative Deg protease homologue, expressed -
10 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
11 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
12 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
13 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
14 Sobic.003G094100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.007G135800 ATP-dependent Clp protease adaptor protein ClpS containing protein, expressed K06891: ATP-dependent Clp protease adaptor protein ClpS
16 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
17 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
18 Sobic.002G220900 expressed protein -
19 Sobic.003G037300 Twin LOV 1, putative, expressed -
20 Sobic.008G052900 CBS domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G345500 Sobic003G345500 Sobic009G062400 Sobic009G062400 Sobic003G345500--Sobic009G062400 Sobic001G504400 Sobic001G504400 Sobic003G345500--Sobic001G504400 Sobic008G006100 Sobic008G006100 Sobic003G345500--Sobic008G006100 Sobic009G207900 Sobic009G207900 Sobic003G345500--Sobic009G207900 Sobic007G103400 Sobic007G103400 Sobic003G345500--Sobic007G103400 Sobic007G058001 Sobic007G058001 Sobic003G345500--Sobic007G058001 Sobic006G102000 Sobic006G102000 Sobic003G345500--Sobic006G102000 Sobic002G005600 Sobic002G005600 Sobic003G345500--Sobic002G005600 Sobic009G237000 Sobic009G237000 Sobic003G345500--Sobic009G237000 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic003G037300 Sobic003G037300 Sobic009G062400--Sobic003G037300 Sobic004G154400 Sobic004G154400 Sobic009G062400--Sobic004G154400 Sobic001G286600 Sobic001G286600 Sobic009G062400--Sobic001G286600 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic002G206300 Sobic002G206300 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic001G500600 Sobic001G500600 Sobic008G006100--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic008G006100--Sobic003G070900 Sobic008G006100--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic008G006100--Sobic001G134700 Sobic003G233700 Sobic003G233700 Sobic008G006100--Sobic003G233700 Sobic008G006100--Sobic007G103400 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic009G207900--Sobic001G180200 Sobic009G207900--Sobic002G206300 Sobic009G207900--Sobic001G504400 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G207900--Sobic009G062400 Sobic007G103400--Sobic009G237000 Sobic002G298800 Sobic002G298800 Sobic007G103400--Sobic002G298800 Sobic004G353100 Sobic004G353100 Sobic007G103400--Sobic004G353100 Sobic010G035400 Sobic010G035400 Sobic007G103400--Sobic010G035400 Sobic007G103400--Sobic001G504400 Sobic003G306200 Sobic003G306200 Sobic007G103400--Sobic003G306200 Sobic002G198300 Sobic002G198300 Sobic007G103400--Sobic002G198300 Sobic007G103400--Sobic003G233700 Sobic002G275300 Sobic002G275300 Sobic007G103400--Sobic002G275300 Sobic010G043800 Sobic010G043800 Sobic007G058001--Sobic010G043800 Sobic007G058001--Sobic002G005600 Sobic007G058001--Sobic001G504400 Sobic007G058001--Sobic003G345500 Sobic006G232600 Sobic006G232600 Sobic007G058001--Sobic006G232600 Sobic007G058001--Sobic007G135800 Sobic001G217900 Sobic001G217900 Sobic007G058001--Sobic001G217900 Sobic003G003450 Sobic003G003450 Sobic007G058001--Sobic003G003450 Sobic007G058001--Sobic009G207900 Sobic007G108900 Sobic007G108900 Sobic006G102000--Sobic007G108900 Sobic006G102000--Sobic009G237000 Sobic001G289500 Sobic001G289500 Sobic006G102000--Sobic001G289500 Sobic003G094100 Sobic003G094100 Sobic006G102000--Sobic003G094100 Sobic010G181300 Sobic010G181300 Sobic006G102000--Sobic010G181300 Sobic006G102000--Sobic002G275300 Sobic001G491000 Sobic001G491000 Sobic006G102000--Sobic001G491000 Sobic006G207800 Sobic006G207800 Sobic006G102000--Sobic006G207800 Sobic004G303200 Sobic004G303200 Sobic006G102000--Sobic004G303200 Sobic002G005600--Sobic009G207900 Sobic002G005600--Sobic002G206300 Sobic002G005600--Sobic001G180200 Sobic002G005600--Sobic006G212800 Sobic002G005600--Sobic001G504400 Sobic002G005600--Sobic007G058001 Sobic001G054000 Sobic001G054000 Sobic002G005600--Sobic001G054000 Sobic001G540600 Sobic001G540600 Sobic002G005600--Sobic001G540600 Sobic002G005600--Sobic003G345500 Sobic009G237000--Sobic007G103400 Sobic009G237000--Sobic004G353100 Sobic009G237000--Sobic006G102000 Sobic009G237000--Sobic002G298800 Sobic009G237000--Sobic010G035400 Sobic009G237000--Sobic001G504400 Sobic009G237000--Sobic003G233700 Sobic009G237000--Sobic007G108900 Sobic008G074000 Sobic008G074000 Sobic009G237000--Sobic008G074000
Octagon: transcription factors


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