Gene annotation
Transcriptome id Sobic.003G037300.1
Synonym PLPC, PLPA, PLP, PLPB
Functional annotation Twin LOV 1, putative, expressed
UniProt A0A1B6Q1A5
Pfam PF13426
Panther DB PTHR24351
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02710 : PAS/LOV protein B
RAP-DB (Rice) LOC_Os01g09120.1 : Twin LOV 1, putative, expressed
MaizeGDB (Corn) Zm00025a023093
Brachypodium KQK03090 , KQK03091
Barley HORVU3Hr1G020100.10 , HORVU3Hr1G020100.14 , HORVU3Hr1G020100.16 , HORVU3Hr1G020100.17 , HORVU3Hr1G020100.8 , HORVU3Hr1G020100.9 , HORVU3Hr1G020100.6 , HORVU3Hr1G020100.7 , HORVU3Hr1G020100.4 , HORVU3Hr1G020100.5 , HORVU3Hr1G020100.2 , HORVU3Hr1G020100.3 , HORVU3Hr1G020100.1 , HORVU3Hr1G020100.12 , HORVU3Hr1G020100.15 , HORVU3Hr1G020100.11 , HORVU3Hr1G020100.13 , HORVU3Hr1G020100.18 , HORVU3Hr1G020100.19 , HORVU3Hr1G020100.29 , HORVU3Hr1G020100.28 , HORVU3Hr1G020100.21 , HORVU3Hr1G020100.20 , HORVU3Hr1G020100.23 , HORVU3Hr1G020100.22 , HORVU3Hr1G020100.25 , HORVU3Hr1G020100.24 , HORVU3Hr1G020100.27 , HORVU3Hr1G020100.26 , HORVU3Hr1G020100.36 , HORVU3Hr1G020100.34 , HORVU3Hr1G020100.35 , HORVU3Hr1G020100.32 , HORVU3Hr1G020100.33 , HORVU3Hr1G020100.30 , HORVU3Hr1G020100.31
Wheat TraesCS3A02G111100 , TraesCS3A02G111100 , TraesCS3A02G111100 , TraesCS3A02G111100 , TraesCS3B02G129800 , TraesCS3B02G129800 , TraesCS3B02G129800 , TraesCS3B02G129800 , TraesCS3B02G129800 , TraesCS3B02G129800 , TraesCS3D02G113100 , TraesCS3D02G113100 , TraesCS3D02G113100 , TraesCS3D02G113100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G298900 OR, putative, expressed -
2 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
3 Sobic.008G006100 MATE efflux protein, putative, expressed -
4 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
5 Sobic.009G207900 expressed protein -
6 Sobic.004G154400 drought-induced protein 1, putative, expressed -
7 Sobic.010G076800 ferredoxin thioredoxin reductase catalytic beta chain family protein(PubMedID : 26465154)@ferredoxin-thioredoxin reductase catalytic chain, chloroplast precursor, putative, expressed K17892: ferredoxin-thioredoxin reductase catalytic chain
8 Sobic.001G521200 expressed protein -
9 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G006400 cytochrome P450, putative, expressed -
11 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
12 Sobic.003G014300 expressed protein -
13 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
14 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
15 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
17 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
18 Sobic.002G005600 Aldolase-type TIM barrel family protein(PubMedID : 26465154)@SOR/SNZ family protein, putative, expressed K06215: pdxS, pyridoxal 5'-phosphate synthase pdxS subunit
19 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
20 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor


Gene co-expression network
sample Sobic003G037300 Sobic003G037300 Sobic004G298900 Sobic004G298900 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic010G269400 Sobic010G269400 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic001G286600 Sobic001G286600 Sobic003G037300--Sobic001G286600 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic009G062400--Sobic003G037300 Sobic009G062400--Sobic004G154400 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic008G006100--Sobic009G062400 Sobic001G500600 Sobic001G500600 Sobic008G006100--Sobic001G500600 Sobic003G070900 Sobic003G070900 Sobic008G006100--Sobic003G070900 Sobic009G237000 Sobic009G237000 Sobic008G006100--Sobic009G237000 Sobic001G134700 Sobic001G134700 Sobic008G006100--Sobic001G134700 Sobic003G233700 Sobic003G233700 Sobic008G006100--Sobic003G233700 Sobic007G103400 Sobic007G103400 Sobic008G006100--Sobic007G103400 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic010G269400--Sobic003G037300 Sobic010G269400--Sobic003G014300 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic010G269400--Sobic009G062400 Sobic006G212800 Sobic006G212800 Sobic009G207900--Sobic006G212800 Sobic001G180200 Sobic001G180200 Sobic009G207900--Sobic001G180200 Sobic002G206300 Sobic002G206300 Sobic009G207900--Sobic002G206300 Sobic001G504400 Sobic001G504400 Sobic009G207900--Sobic001G504400 Sobic009G207900--Sobic009G219100 Sobic007G135800 Sobic007G135800 Sobic009G207900--Sobic007G135800 Sobic009G038701 Sobic009G038701 Sobic009G207900--Sobic009G038701 Sobic003G073800 Sobic003G073800 Sobic009G207900--Sobic003G073800 Sobic009G207900--Sobic009G062400 Sobic004G154400--Sobic009G219100 Sobic004G154400--Sobic001G286600 Sobic004G154400--Sobic009G062400 Sobic004G154400--Sobic010G058200 Sobic002G136100 Sobic002G136100 Sobic004G154400--Sobic002G136100 Sobic004G154400--Sobic009G207900 Sobic004G006400 Sobic004G006400 Sobic004G154400--Sobic004G006400 Sobic004G154400--Sobic009G237000 Sobic006G158700 Sobic006G158700 Sobic004G154400--Sobic006G158700 Sobic002G331800 Sobic002G331800 Sobic010G076800--Sobic002G331800 Sobic001G006000 Sobic001G006000 Sobic010G076800--Sobic001G006000 Sobic007G076900 Sobic007G076900 Sobic010G076800--Sobic007G076900 Sobic006G214700 Sobic006G214700 Sobic010G076800--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic010G076800--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic010G076800--Sobic003G253300 Sobic006G193200 Sobic006G193200 Sobic010G076800--Sobic006G193200 Sobic010G076800--Sobic003G037300 Sobic003G179400 Sobic003G179400 Sobic010G076800--Sobic003G179400 Sobic001G183000 Sobic001G183000 Sobic001G521200--Sobic001G183000 Sobic001G521200--Sobic008G006100 Sobic001G521200--Sobic003G037300 Sobic001G521200--Sobic003G233700 Sobic002G402700 Sobic002G402700 Sobic001G521200--Sobic002G402700 Sobic001G521200--Sobic004G006400 Sobic002G133900 Sobic002G133900 Sobic001G521200--Sobic002G133900 Sobic005G100300 Sobic005G100300 Sobic001G521200--Sobic005G100300 Sobic001G521200--Sobic009G062400 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic001G286600--Sobic010G058200 Sobic001G118400 Sobic001G118400 Sobic001G286600--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic001G286600--Sobic003G328100 Sobic006G155500 Sobic006G155500 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic001G286600--Sobic003G070900
Octagon: transcription factors


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