Gene annotation
Transcriptome id Sobic.001G465700.1,Sobic.001G465700.2
Synonym Sb01g043690, BIO1
Functional annotation aminotransferase, putative, expressed
UniProt A0A1Z5SAU2 , C5WTT1
Pfam PF00202 PF13500 PF13500 PF00202
Panther DB PTHR11986 PTHR11986:SF8
NCBI CDD KOG1401; Acetylornithine aminotransferase
KEGG Orthology K00833; adenosylmethionine---8-amino-7-oxononanoate aminotransferase
Gene Ontology GO:0008483; transaminase activity


Orthologs (automatic annotation)
TAIR AT5G57590 : adenosylmethionine-8-amino-7-oxononanoate transaminases
RAP-DB (Rice) LOC_Os08g14770.1 : aminotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a054660
Brachypodium KQJ95782 , KQJ95781
Barley HORVU6Hr1G033090.1
Wheat TraesCS6A02G160100 , TraesCS6D02G152600 , TraesCS6B02G191300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
2 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
3 Sobic.005G111550 - -
4 Sobic.003G442700 - -
5 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
6 Sobic.004G294700 F-box family protein, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
7 Sobic.001G530900 expressed protein -
8 Sobic.004G298900 OR, putative, expressed -
9 Sobic.006G031800 - -
10 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
11 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
12 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
13 Sobic.009G215500 transcription initiation factor IIB, putative, expressed K15196: BRF1, transcription factor IIIB 90 kDa subunit
14 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
15 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
16 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
17 Sobic.003G037300 Twin LOV 1, putative, expressed -
18 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
19 Sobic.004G179400 ferrochelatase 2(PubMedID : 26465154)@ferrochelatase-2, chloroplast precursor, putative, expressed K01772: hemH, protoporphyrin/coproporphyrin ferrochelatase
20 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -


Gene co-expression network
sample Sobic001G465700 Sobic001G465700 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic010G043800 Sobic010G043800 Sobic001G465700--Sobic010G043800 Sobic005G111550 Sobic005G111550 Sobic001G465700--Sobic005G111550 Sobic003G442700 Sobic003G442700 Sobic001G465700--Sobic003G442700 Sobic008G001900 Sobic008G001900 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G530900 Sobic001G530900 Sobic001G465700--Sobic001G530900 Sobic004G298900 Sobic004G298900 Sobic001G465700--Sobic004G298900 Sobic006G031800 Sobic006G031800 Sobic001G465700--Sobic006G031800 Sobic002G347600 Sobic002G347600 Sobic006G038500--Sobic002G347600 Sobic006G038500--Sobic001G465700 Sobic004G120100 Sobic004G120100 Sobic006G038500--Sobic004G120100 Sobic001G126300 Sobic001G126300 Sobic006G038500--Sobic001G126300 Sobic003G141100 Sobic003G141100 Sobic006G038500--Sobic003G141100 Sobic006G128300 Sobic006G128300 Sobic006G038500--Sobic006G128300 Sobic001G516901 Sobic001G516901 Sobic006G038500--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic006G038500--Sobic003G232700 Sobic003G160800 Sobic003G160800 Sobic006G038500--Sobic003G160800 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic007G136200 Sobic007G136200 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic003G085100 Sobic003G085100 Sobic005G111550--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic005G111550--Sobic003G150800 Sobic002G042500 Sobic002G042500 Sobic005G111550--Sobic002G042500 Sobic005G111550--Sobic003G160800 Sobic001G500600 Sobic001G500600 Sobic005G111550--Sobic001G500600 Sobic001G037500 Sobic001G037500 Sobic005G111550--Sobic001G037500 Sobic005G111550--Sobic004G298900 Sobic005G063000 Sobic005G063000 Sobic005G111550--Sobic005G063000 Sobic005G111550--Sobic001G465700 Sobic003G442700--Sobic001G465700 Sobic004G235600 Sobic004G235600 Sobic003G442700--Sobic004G235600 Sobic003G442700--Sobic008G001900 Sobic003G332700 Sobic003G332700 Sobic003G442700--Sobic003G332700 Sobic003G442700--Sobic009G121000 Sobic003G442700--Sobic002G042500 Sobic001G060401 Sobic001G060401 Sobic003G442700--Sobic001G060401 Sobic004G001300 Sobic004G001300 Sobic003G442700--Sobic004G001300 Sobic001G073900 Sobic001G073900 Sobic003G442700--Sobic001G073900 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic008G001900--Sobic001G073900 Sobic008G001900--Sobic004G235600 Sobic008G001900--Sobic003G085100 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic008G001900--Sobic001G465700 Sobic004G294700--Sobic001G465700 Sobic002G145000 Sobic002G145000 Sobic004G294700--Sobic002G145000 Sobic004G182900 Sobic004G182900 Sobic004G294700--Sobic004G182900 Sobic003G168100 Sobic003G168100 Sobic004G294700--Sobic003G168100 Sobic004G294700--Sobic006G031800 Sobic006G271800 Sobic006G271800 Sobic004G294700--Sobic006G271800 Sobic006G181000 Sobic006G181000 Sobic004G294700--Sobic006G181000 Sobic007G136800 Sobic007G136800 Sobic004G294700--Sobic007G136800 Sobic001G043800 Sobic001G043800 Sobic004G294700--Sobic001G043800 Sobic001G530900--Sobic010G002700 Sobic009G215500 Sobic009G215500 Sobic001G530900--Sobic009G215500 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic005G118400 Sobic005G118400 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic001G530900--Sobic003G332700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic003G037300 Sobic003G037300 Sobic004G298900--Sobic003G037300 Sobic009G062400 Sobic009G062400 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800 Sobic006G031800--Sobic009G215500 Sobic006G031800--Sobic001G465700 Sobic006G031800--Sobic007G136800 Sobic006G031800--Sobic003G168100 Sobic006G031800--Sobic003G217700 Sobic003G110800 Sobic003G110800 Sobic006G031800--Sobic003G110800 Sobic006G031800--Sobic006G128300 Sobic006G031800--Sobic006G038500 Sobic002G218500 Sobic002G218500 Sobic006G031800--Sobic002G218500
Octagon: transcription factors


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