Gene annotation
Transcriptome id Sobic.008G001900.1
Synonym Sb08g000350
Functional annotation mitochondrial substrate carrier family protein, putative, expressed
UniProt C5YPQ9
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF300
NCBI CDD KOG0768; Mitochondrial carrier protein PET8
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35800 : mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os11g01270.1 : mitochondrial substrate carrier family protein, putative, expressed
MaizeGDB (Corn) Zm00025a013230 , Zm00025a028911 , Zm00025a038166 , Zm00025a031478
Brachypodium KQJ92677 , KQJ92678
Barley HORVU5Hr1G048510.4 , HORVU5Hr1G048510.1 , HORVU5Hr1G048510.3 , HORVU5Hr1G048510.2
Wheat TraesCS5A02G155300 , TraesCS5A02G155300 , TraesCS5D02G160400 , TraesCS5B02G153600 , TraesCS5B02G153600
Populus -


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cDNA sequences
Sobic.008G001900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
2 Sobic.001G073900 lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
3 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
4 Sobic.003G085100 MYB family transcription factor, putative, expressed -
5 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
6 Sobic.004G054400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
7 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
8 Sobic.005G204200 peptide chain release factor protein, putative, expressed K02835: prfA, MTRF1, peptide chain release factor 1
9 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
10 Sobic.002G220900 expressed protein -
11 Sobic.005G111550 - -
12 Sobic.006G101500 expressed protein -
13 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
14 Sobic.003G442700 - -
15 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
16 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
17 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
18 Sobic.003G217700 - -
19 Sobic.006G038500 tRNA-dihydrouridine synthase, putative, expressed K05539: tRNA-dihydrouridine synthase A
20 Sobic.006G128300 DUF565 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic008G001900 Sobic008G001900 Sobic005G001700 Sobic005G001700 Sobic008G001900--Sobic005G001700 Sobic001G073900 Sobic001G073900 Sobic008G001900--Sobic001G073900 Sobic004G235600 Sobic004G235600 Sobic008G001900--Sobic004G235600 Sobic003G085100 Sobic003G085100 Sobic008G001900--Sobic003G085100 Sobic003G332700 Sobic003G332700 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic005G063000 Sobic005G063000 Sobic008G001900--Sobic005G063000 Sobic005G204200 Sobic005G204200 Sobic008G001900--Sobic005G204200 Sobic001G465700 Sobic001G465700 Sobic008G001900--Sobic001G465700 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G001700--Sobic005G063000 Sobic003G185900 Sobic003G185900 Sobic005G001700--Sobic003G185900 Sobic002G402700 Sobic002G402700 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200 Sobic001G073900--Sobic003G332700 Sobic001G073900--Sobic008G001900 Sobic008G117000 Sobic008G117000 Sobic001G073900--Sobic008G117000 Sobic003G342100 Sobic003G342100 Sobic001G073900--Sobic003G342100 Sobic001G065600 Sobic001G065600 Sobic001G073900--Sobic001G065600 Sobic001G531500 Sobic001G531500 Sobic001G073900--Sobic001G531500 Sobic001G073900--Sobic005G001700 Sobic001G073900--Sobic004G235600 Sobic002G049600 Sobic002G049600 Sobic001G073900--Sobic002G049600 Sobic004G235600--Sobic008G001900 Sobic004G235600--Sobic001G073900 Sobic003G442700 Sobic003G442700 Sobic004G235600--Sobic003G442700 Sobic004G235600--Sobic003G332700 Sobic004G235600--Sobic003G085100 Sobic004G235600--Sobic005G001700 Sobic002G314400 Sobic002G314400 Sobic004G235600--Sobic002G314400 Sobic002G042500 Sobic002G042500 Sobic004G235600--Sobic002G042500 Sobic004G235600--Sobic001G465700 Sobic003G150800 Sobic003G150800 Sobic003G085100--Sobic003G150800 Sobic007G005400 Sobic007G005400 Sobic003G085100--Sobic007G005400 Sobic005G111550 Sobic005G111550 Sobic003G085100--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic003G085100--Sobic003G160800 Sobic003G085100--Sobic005G063000 Sobic003G233700 Sobic003G233700 Sobic003G085100--Sobic003G233700 Sobic001G001300 Sobic001G001300 Sobic003G085100--Sobic001G001300 Sobic003G287900 Sobic003G287900 Sobic003G085100--Sobic003G287900 Sobic003G085100--Sobic008G001900 Sobic003G332700--Sobic001G073900 Sobic003G332700--Sobic008G001900 Sobic003G332700--Sobic008G117000 Sobic001G530900 Sobic001G530900 Sobic003G332700--Sobic001G530900 Sobic003G332700--Sobic004G235600 Sobic003G332700--Sobic001G531500 Sobic003G332700--Sobic003G442700 Sobic010G085100 Sobic010G085100 Sobic003G332700--Sobic010G085100 Sobic005G118400 Sobic005G118400 Sobic003G332700--Sobic005G118400 Sobic001G124800 Sobic001G124800 Sobic004G054400--Sobic001G124800 Sobic001G309300 Sobic001G309300 Sobic004G054400--Sobic001G309300 Sobic003G387100 Sobic003G387100 Sobic004G054400--Sobic003G387100 Sobic001G032700 Sobic001G032700 Sobic004G054400--Sobic001G032700 Sobic004G054400--Sobic008G001900 Sobic001G516901 Sobic001G516901 Sobic004G054400--Sobic001G516901 Sobic001G512500 Sobic001G512500 Sobic004G054400--Sobic001G512500 Sobic004G336000 Sobic004G336000 Sobic004G054400--Sobic004G336000 Sobic006G010900 Sobic006G010900 Sobic004G054400--Sobic006G010900 Sobic004G211600 Sobic004G211600 Sobic005G063000--Sobic004G211600 Sobic005G063000--Sobic005G204200 Sobic009G121000 Sobic009G121000 Sobic005G063000--Sobic009G121000 Sobic005G063000--Sobic005G001700 Sobic005G063000--Sobic003G085100 Sobic005G063000--Sobic003G160800 Sobic010G214100 Sobic010G214100 Sobic005G063000--Sobic010G214100 Sobic007G103400 Sobic007G103400 Sobic005G063000--Sobic007G103400 Sobic010G043800 Sobic010G043800 Sobic005G063000--Sobic010G043800 Sobic005G204200--Sobic003G160800 Sobic005G204200--Sobic005G063000 Sobic005G204200--Sobic002G220900 Sobic005G204200--Sobic005G001700 Sobic005G204200--Sobic003G233700 Sobic010G035400 Sobic010G035400 Sobic005G204200--Sobic010G035400 Sobic005G204200--Sobic007G103400 Sobic005G204200--Sobic003G085100 Sobic004G336200 Sobic004G336200 Sobic005G204200--Sobic004G336200 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic001G465700--Sobic010G043800 Sobic001G465700--Sobic005G111550 Sobic001G465700--Sobic003G442700 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G465700--Sobic001G530900 Sobic004G298900 Sobic004G298900 Sobic001G465700--Sobic004G298900 Sobic006G031800 Sobic006G031800 Sobic001G465700--Sobic006G031800
Octagon: transcription factors


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