Gene annotation
Transcriptome id Sobic.005G111550.1
Synonym -
Functional annotation -
UniProt A0A1Z5RJ86
Pfam -
Panther DB PTHR21712 PTHR21712:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07220 : SMAD/FHA domain-containing protein
RAP-DB (Rice) LOC_Os11g27530.1 : FHA domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a029766
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G085100 MYB family transcription factor, putative, expressed -
2 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
3 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
4 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
5 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
6 Sobic.001G037500 expressed protein -
7 Sobic.004G298900 OR, putative, expressed -
8 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
9 Sobic.001G465700 aminotransferase, putative, expressed K00833: adenosylmethionine---8-amino-7-oxononanoate aminotransferase
10 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
11 Sobic.002G314400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
12 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
13 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
14 Sobic.003G141100 O-sialoglycoprotein endopeptidase, putative, expressed K01409: KAE1, tsaD, N6-L-threonylcarbamoyladenine synthase
15 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
16 Sobic.007G005400 chaperone protein dnaJ, putative, expressed K03686: molecular chaperone DnaJ
17 Sobic.003G233700 SET domain-containing protein, putative, expressed -
18 Sobic.002G028400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
19 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
20 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -


Gene co-expression network
sample Sobic005G111550 Sobic005G111550 Sobic003G085100 Sobic003G085100 Sobic005G111550--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic005G111550--Sobic003G150800 Sobic002G042500 Sobic002G042500 Sobic005G111550--Sobic002G042500 Sobic003G160800 Sobic003G160800 Sobic005G111550--Sobic003G160800 Sobic001G500600 Sobic001G500600 Sobic005G111550--Sobic001G500600 Sobic001G037500 Sobic001G037500 Sobic005G111550--Sobic001G037500 Sobic004G298900 Sobic004G298900 Sobic005G111550--Sobic004G298900 Sobic005G063000 Sobic005G063000 Sobic005G111550--Sobic005G063000 Sobic001G465700 Sobic001G465700 Sobic005G111550--Sobic001G465700 Sobic003G085100--Sobic003G150800 Sobic007G005400 Sobic007G005400 Sobic003G085100--Sobic007G005400 Sobic003G085100--Sobic005G111550 Sobic003G085100--Sobic003G160800 Sobic003G085100--Sobic005G063000 Sobic003G233700 Sobic003G233700 Sobic003G085100--Sobic003G233700 Sobic001G001300 Sobic001G001300 Sobic003G085100--Sobic001G001300 Sobic003G287900 Sobic003G287900 Sobic003G085100--Sobic003G287900 Sobic008G001900 Sobic008G001900 Sobic003G085100--Sobic008G001900 Sobic003G150800--Sobic003G085100 Sobic003G150800--Sobic002G042500 Sobic003G150800--Sobic005G111550 Sobic003G150800--Sobic007G005400 Sobic003G150800--Sobic001G037500 Sobic003G150800--Sobic005G063000 Sobic002G314400 Sobic002G314400 Sobic003G150800--Sobic002G314400 Sobic004G328400 Sobic004G328400 Sobic003G150800--Sobic004G328400 Sobic003G141100 Sobic003G141100 Sobic003G150800--Sobic003G141100 Sobic002G042500--Sobic001G037500 Sobic002G042500--Sobic003G150800 Sobic002G042500--Sobic005G111550 Sobic004G206200 Sobic004G206200 Sobic002G042500--Sobic004G206200 Sobic002G042500--Sobic003G085100 Sobic002G042500--Sobic003G141100 Sobic002G296100 Sobic002G296100 Sobic002G042500--Sobic002G296100 Sobic007G185700 Sobic007G185700 Sobic002G042500--Sobic007G185700 Sobic001G126300 Sobic001G126300 Sobic002G042500--Sobic001G126300 Sobic004G336200 Sobic004G336200 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic010G035400 Sobic010G035400 Sobic003G160800--Sobic010G035400 Sobic003G387100 Sobic003G387100 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G160800--Sobic003G233700 Sobic001G134700 Sobic001G134700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic003G094350 Sobic003G094350 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic003G070900 Sobic003G070900 Sobic001G500600--Sobic003G070900 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic002G133900 Sobic002G133900 Sobic001G500600--Sobic002G133900 Sobic003G372900 Sobic003G372900 Sobic001G500600--Sobic003G372900 Sobic001G037500--Sobic002G042500 Sobic001G054100 Sobic001G054100 Sobic001G037500--Sobic001G054100 Sobic006G273400 Sobic006G273400 Sobic001G037500--Sobic006G273400 Sobic001G037500--Sobic003G150800 Sobic001G037500--Sobic005G111550 Sobic001G037500--Sobic004G206200 Sobic002G081500 Sobic002G081500 Sobic001G037500--Sobic002G081500 Sobic001G037500--Sobic003G372900 Sobic001G037500--Sobic002G296100 Sobic003G037300 Sobic003G037300 Sobic004G298900--Sobic003G037300 Sobic009G062400 Sobic009G062400 Sobic004G298900--Sobic009G062400 Sobic006G258700 Sobic006G258700 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic003G014300 Sobic003G014300 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic004G298900--Sobic005G111550 Sobic004G151500 Sobic004G151500 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800 Sobic004G211600 Sobic004G211600 Sobic005G063000--Sobic004G211600 Sobic005G204200 Sobic005G204200 Sobic005G063000--Sobic005G204200 Sobic009G121000 Sobic009G121000 Sobic005G063000--Sobic009G121000 Sobic005G001700 Sobic005G001700 Sobic005G063000--Sobic005G001700 Sobic005G063000--Sobic003G085100 Sobic005G063000--Sobic003G160800 Sobic010G214100 Sobic010G214100 Sobic005G063000--Sobic010G214100 Sobic005G063000--Sobic007G103400 Sobic010G043800 Sobic010G043800 Sobic005G063000--Sobic010G043800 Sobic006G038500 Sobic006G038500 Sobic001G465700--Sobic006G038500 Sobic001G465700--Sobic010G043800 Sobic001G465700--Sobic005G111550 Sobic003G442700 Sobic003G442700 Sobic001G465700--Sobic003G442700 Sobic001G465700--Sobic008G001900 Sobic004G294700 Sobic004G294700 Sobic001G465700--Sobic004G294700 Sobic001G530900 Sobic001G530900 Sobic001G465700--Sobic001G530900 Sobic001G465700--Sobic004G298900 Sobic006G031800 Sobic006G031800 Sobic001G465700--Sobic006G031800
Octagon: transcription factors


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