Gene annotation
Transcriptome id Sobic.001G001300.1
Synonym Sb01g000270
Functional annotation rhodanese-like domain containing protein, putative, expressed
UniProt C5WRU2
Pfam PF00581 PF12368
Panther DB PTHR22778 PTHR22778:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17850 : Rhodanese/Cell cycle control phosphatase superfamily protein
RAP-DB (Rice) LOC_Os03g64350.1 : rhodanese-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a009160
Brachypodium PNT73740 , PNT73738 , KQK11940 , KQK11938 , KQK11939 , PNT73739 , KQK11937 , KQK11936 , KQK11935
Barley HORVU5Hr1G124520.1 , HORVU5Hr1G124520.3 , HORVU5Hr1G124520.2 , HORVU5Hr1G124520.5 , HORVU5Hr1G124520.4 , HORVU5Hr1G124520.7 , HORVU5Hr1G124520.6 , HORVU5Hr1G124520.9 , HORVU5Hr1G124520.8 , HORVU5Hr1G124520.15 , HORVU5Hr1G124520.14 , HORVU5Hr1G124520.17 , HORVU5Hr1G124520.16 , HORVU5Hr1G124520.11 , HORVU5Hr1G124520.10 , HORVU5Hr1G124520.13 , HORVU5Hr1G124520.12
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G280800 expressed protein -
2 Sobic.003G085100 MYB family transcription factor, putative, expressed -
3 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
4 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
5 Sobic.009G148500 GTPase of unknown function domain containing protein, putative, expressed -
6 Sobic.005G111550 - -
7 Sobic.003G287900 phenylalanyl-tRNA synthetase, putative, expressed K01889: FARSA, phenylalanyl-tRNA synthetase alpha chain
8 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
9 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
10 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
11 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
12 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
13 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
14 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
16 Sobic.003G233700 SET domain-containing protein, putative, expressed -
17 Sobic.010G002000 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed K14164: glycyl-tRNA synthetase
18 Sobic.002G314400 peptidase, M24 family protein, putative, expressed K01265: methionyl aminopeptidase
19 Sobic.008G006100 MATE efflux protein, putative, expressed -
20 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic001G001300 Sobic001G001300 Sobic006G280800 Sobic006G280800 Sobic001G001300--Sobic006G280800 Sobic003G085100 Sobic003G085100 Sobic001G001300--Sobic003G085100 Sobic003G160800 Sobic003G160800 Sobic001G001300--Sobic003G160800 Sobic002G133900 Sobic002G133900 Sobic001G001300--Sobic002G133900 Sobic009G148500 Sobic009G148500 Sobic001G001300--Sobic009G148500 Sobic005G111550 Sobic005G111550 Sobic001G001300--Sobic005G111550 Sobic003G287900 Sobic003G287900 Sobic001G001300--Sobic003G287900 Sobic001G500600 Sobic001G500600 Sobic001G001300--Sobic001G500600 Sobic001G134700 Sobic001G134700 Sobic001G001300--Sobic001G134700 Sobic006G280800--Sobic001G001300 Sobic006G280800--Sobic001G500600 Sobic003G094350 Sobic003G094350 Sobic006G280800--Sobic003G094350 Sobic004G333400 Sobic004G333400 Sobic006G280800--Sobic004G333400 Sobic003G070900 Sobic003G070900 Sobic006G280800--Sobic003G070900 Sobic003G372900 Sobic003G372900 Sobic006G280800--Sobic003G372900 Sobic006G280800--Sobic002G133900 Sobic008G006100 Sobic008G006100 Sobic006G280800--Sobic008G006100 Sobic006G280800--Sobic001G134700 Sobic003G150800 Sobic003G150800 Sobic003G085100--Sobic003G150800 Sobic007G005400 Sobic007G005400 Sobic003G085100--Sobic007G005400 Sobic003G085100--Sobic005G111550 Sobic003G085100--Sobic003G160800 Sobic005G063000 Sobic005G063000 Sobic003G085100--Sobic005G063000 Sobic003G233700 Sobic003G233700 Sobic003G085100--Sobic003G233700 Sobic003G085100--Sobic001G001300 Sobic003G085100--Sobic003G287900 Sobic008G001900 Sobic008G001900 Sobic003G085100--Sobic008G001900 Sobic004G336200 Sobic004G336200 Sobic003G160800--Sobic004G336200 Sobic005G100300 Sobic005G100300 Sobic003G160800--Sobic005G100300 Sobic010G035400 Sobic010G035400 Sobic003G160800--Sobic010G035400 Sobic003G387100 Sobic003G387100 Sobic003G160800--Sobic003G387100 Sobic007G103400 Sobic007G103400 Sobic003G160800--Sobic007G103400 Sobic002G112400 Sobic002G112400 Sobic003G160800--Sobic002G112400 Sobic003G160800--Sobic003G233700 Sobic003G160800--Sobic001G134700 Sobic009G175500 Sobic009G175500 Sobic003G160800--Sobic009G175500 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic004G353100 Sobic004G353100 Sobic002G133900--Sobic004G353100 Sobic002G133900--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic002G133900--Sobic002G028400 Sobic002G133900--Sobic007G103400 Sobic009G170200 Sobic009G170200 Sobic002G133900--Sobic009G170200 Sobic001G083100 Sobic001G083100 Sobic009G148500--Sobic001G083100 Sobic003G151500 Sobic003G151500 Sobic009G148500--Sobic003G151500 Sobic008G073100 Sobic008G073100 Sobic009G148500--Sobic008G073100 Sobic006G055800 Sobic006G055800 Sobic009G148500--Sobic006G055800 Sobic001G126300 Sobic001G126300 Sobic009G148500--Sobic001G126300 Sobic004G011300 Sobic004G011300 Sobic009G148500--Sobic004G011300 Sobic005G002900 Sobic005G002900 Sobic009G148500--Sobic005G002900 Sobic005G110400 Sobic005G110400 Sobic009G148500--Sobic005G110400 Sobic009G148500--Sobic001G500600 Sobic005G111550--Sobic003G085100 Sobic005G111550--Sobic003G150800 Sobic002G042500 Sobic002G042500 Sobic005G111550--Sobic002G042500 Sobic005G111550--Sobic003G160800 Sobic005G111550--Sobic001G500600 Sobic001G037500 Sobic001G037500 Sobic005G111550--Sobic001G037500 Sobic004G298900 Sobic004G298900 Sobic005G111550--Sobic004G298900 Sobic005G111550--Sobic005G063000 Sobic001G465700 Sobic001G465700 Sobic005G111550--Sobic001G465700 Sobic003G287900--Sobic003G070900 Sobic003G287900--Sobic002G133900 Sobic003G287900--Sobic003G094350 Sobic003G287900--Sobic003G233700 Sobic003G287900--Sobic001G500600 Sobic003G287900--Sobic004G353100 Sobic003G287900--Sobic004G336200 Sobic008G074000 Sobic008G074000 Sobic003G287900--Sobic008G074000 Sobic003G287900--Sobic009G170200 Sobic001G500600--Sobic003G094350 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900 Sobic001G134700--Sobic004G336200 Sobic001G134700--Sobic005G100300 Sobic001G134700--Sobic003G160800 Sobic001G134700--Sobic008G006100 Sobic006G101500 Sobic006G101500 Sobic001G134700--Sobic006G101500 Sobic001G134700--Sobic001G500600 Sobic001G134700--Sobic008G073100 Sobic001G134700--Sobic005G110400 Sobic001G134700--Sobic003G387100
Octagon: transcription factors


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