Gene annotation
Transcriptome id Sobic.006G280800.1
Synonym Sb06g034110
Functional annotation expressed protein
UniProt C5YB53
Pfam PF12527
Panther DB PTHR36061 PTHR36061:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G33480 : -
RAP-DB (Rice) LOC_Os04g59570.2 : expressed protein
MaizeGDB (Corn) Zm00025a057503
Brachypodium KQJ85512
Barley -
Wheat TraesCS2A02G559600 , TraesCS2B02G620600
Populus -


JBrowse

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cDNA sequences
Sobic.006G280800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
2 Sobic.001G500600 pseudouridine synthase family protein, putative, expressed -
3 Sobic.003G094350 - K01869: LARS, leucyl-tRNA synthetase
4 Sobic.004G333400 COBW domain containing protein, putative, expressed -
5 Sobic.003G070900 inner membrane protein, putative, expressed K03217: yidC, spoIIIJ, OXA1, YidC/Oxa1 family membrane protein insertase
6 Sobic.003G372900 deoxynucleoside kinase family, putative, expressed -
7 Sobic.002G133900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.008G006100 MATE efflux protein, putative, expressed -
9 Sobic.001G134700 2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
10 Sobic.010G002000 glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor, putative, expressed K14164: glycyl-tRNA synthetase
11 Sobic.001G083100 Unnamed(PubMedID : 24676859)@WRKY4, expressed -
12 Sobic.001G118400 expressed protein -
13 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
14 Sobic.003G334100 zinc finger family protein, putative, expressed -
15 Sobic.002G331800 PPR repeat containing protein, expressed -
16 Sobic.002G112400 PGR5-LIKE A(PubMedID : 26465154)@expressed protein -
17 Sobic.005G100300 OsClp12 - Putative Clp protease homologue, expressed -
18 Sobic.002G181000 chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
19 Sobic.008G073100 uncharacterized protein ycf45, putative, expressed -
20 Sobic.008G074000 OsSCP65 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I


Gene co-expression network
sample Sobic006G280800 Sobic006G280800 Sobic001G001300 Sobic001G001300 Sobic006G280800--Sobic001G001300 Sobic001G500600 Sobic001G500600 Sobic006G280800--Sobic001G500600 Sobic003G094350 Sobic003G094350 Sobic006G280800--Sobic003G094350 Sobic004G333400 Sobic004G333400 Sobic006G280800--Sobic004G333400 Sobic003G070900 Sobic003G070900 Sobic006G280800--Sobic003G070900 Sobic003G372900 Sobic003G372900 Sobic006G280800--Sobic003G372900 Sobic002G133900 Sobic002G133900 Sobic006G280800--Sobic002G133900 Sobic008G006100 Sobic008G006100 Sobic006G280800--Sobic008G006100 Sobic001G134700 Sobic001G134700 Sobic006G280800--Sobic001G134700 Sobic001G001300--Sobic006G280800 Sobic003G085100 Sobic003G085100 Sobic001G001300--Sobic003G085100 Sobic003G160800 Sobic003G160800 Sobic001G001300--Sobic003G160800 Sobic001G001300--Sobic002G133900 Sobic009G148500 Sobic009G148500 Sobic001G001300--Sobic009G148500 Sobic005G111550 Sobic005G111550 Sobic001G001300--Sobic005G111550 Sobic003G287900 Sobic003G287900 Sobic001G001300--Sobic003G287900 Sobic001G001300--Sobic001G500600 Sobic001G001300--Sobic001G134700 Sobic001G500600--Sobic003G094350 Sobic004G336200 Sobic004G336200 Sobic001G500600--Sobic004G336200 Sobic006G197300 Sobic006G197300 Sobic001G500600--Sobic006G197300 Sobic001G500600--Sobic003G070900 Sobic003G141100 Sobic003G141100 Sobic001G500600--Sobic003G141100 Sobic003G232700 Sobic003G232700 Sobic001G500600--Sobic003G232700 Sobic001G500600--Sobic003G287900 Sobic001G500600--Sobic002G133900 Sobic001G500600--Sobic003G372900 Sobic003G094350--Sobic002G133900 Sobic003G094350--Sobic003G070900 Sobic003G094350--Sobic001G500600 Sobic003G094350--Sobic003G287900 Sobic005G100300 Sobic005G100300 Sobic003G094350--Sobic005G100300 Sobic002G028400 Sobic002G028400 Sobic003G094350--Sobic002G028400 Sobic003G094350--Sobic004G336200 Sobic010G002000 Sobic010G002000 Sobic003G094350--Sobic010G002000 Sobic004G353100 Sobic004G353100 Sobic003G094350--Sobic004G353100 Sobic003G334100 Sobic003G334100 Sobic004G333400--Sobic003G334100 Sobic004G333400--Sobic001G500600 Sobic010G183400 Sobic010G183400 Sobic004G333400--Sobic010G183400 Sobic001G450600 Sobic001G450600 Sobic004G333400--Sobic001G450600 Sobic002G181000 Sobic002G181000 Sobic004G333400--Sobic002G181000 Sobic004G333400--Sobic006G280800 Sobic004G333400--Sobic003G372900 Sobic004G333400--Sobic003G232700 Sobic001G283700 Sobic001G283700 Sobic004G333400--Sobic001G283700 Sobic003G070900--Sobic002G133900 Sobic003G070900--Sobic003G287900 Sobic009G170200 Sobic009G170200 Sobic003G070900--Sobic009G170200 Sobic003G070900--Sobic003G094350 Sobic001G118400 Sobic001G118400 Sobic003G070900--Sobic001G118400 Sobic003G070900--Sobic001G500600 Sobic003G070900--Sobic004G353100 Sobic008G074000 Sobic008G074000 Sobic003G070900--Sobic008G074000 Sobic003G070900--Sobic008G006100 Sobic003G372900--Sobic001G500600 Sobic001G054100 Sobic001G054100 Sobic003G372900--Sobic001G054100 Sobic001G083100 Sobic001G083100 Sobic003G372900--Sobic001G083100 Sobic002G406700 Sobic002G406700 Sobic003G372900--Sobic002G406700 Sobic003G372900--Sobic003G141100 Sobic003G372900--Sobic003G094350 Sobic003G372900--Sobic004G336200 Sobic003G372900--Sobic004G333400 Sobic003G372900--Sobic006G280800 Sobic002G133900--Sobic003G070900 Sobic002G133900--Sobic003G094350 Sobic002G133900--Sobic003G287900 Sobic002G405100 Sobic002G405100 Sobic002G133900--Sobic002G405100 Sobic002G133900--Sobic004G353100 Sobic002G133900--Sobic005G100300 Sobic002G133900--Sobic002G028400 Sobic007G103400 Sobic007G103400 Sobic002G133900--Sobic007G103400 Sobic002G133900--Sobic009G170200 Sobic002G112400 Sobic002G112400 Sobic008G006100--Sobic002G112400 Sobic001G128600 Sobic001G128600 Sobic008G006100--Sobic001G128600 Sobic009G062400 Sobic009G062400 Sobic008G006100--Sobic009G062400 Sobic008G006100--Sobic001G500600 Sobic008G006100--Sobic003G070900 Sobic009G237000 Sobic009G237000 Sobic008G006100--Sobic009G237000 Sobic008G006100--Sobic001G134700 Sobic003G233700 Sobic003G233700 Sobic008G006100--Sobic003G233700 Sobic008G006100--Sobic007G103400 Sobic001G134700--Sobic004G336200 Sobic001G134700--Sobic005G100300 Sobic001G134700--Sobic003G160800 Sobic001G134700--Sobic008G006100 Sobic006G101500 Sobic006G101500 Sobic001G134700--Sobic006G101500 Sobic001G134700--Sobic001G500600 Sobic008G073100 Sobic008G073100 Sobic001G134700--Sobic008G073100 Sobic005G110400 Sobic005G110400 Sobic001G134700--Sobic005G110400 Sobic003G387100 Sobic003G387100 Sobic001G134700--Sobic003G387100
Octagon: transcription factors


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