Gene annotation
Transcriptome id Sobic.002G314400.1
Synonym MAP1C, Sb02g034380, MAP1B
Functional annotation peptidase, M24 family protein, putative, expressed
UniProt C5X9E5
Pfam PF00557
Panther DB PTHR10804:SF107 PTHR10804
NCBI CDD KOG2738; Putative methionine aminopeptidase
KEGG Orthology K01265; methionyl aminopeptidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G13270 : methionine aminopeptidase 1B
RAP-DB (Rice) LOC_Os07g32590.1 : peptidase, M24 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a014760
Brachypodium KQK16059 , KQK16060 , KQK16061 , KQK16062
Barley HORVU2Hr1G047450.6 , HORVU2Hr1G047450.4 , HORVU2Hr1G047450.5 , HORVU2Hr1G047450.2 , HORVU2Hr1G047450.3 , HORVU2Hr1G047450.8 , HORVU2Hr1G047450.9 , HORVU2Hr1G047450.18 , HORVU2Hr1G047450.19 , HORVU2Hr1G047450.14 , HORVU2Hr1G047450.15 , HORVU2Hr1G047450.16 , HORVU2Hr1G047450.17 , HORVU2Hr1G047450.10 , HORVU2Hr1G047450.11 , HORVU2Hr1G047450.12 , HORVU2Hr1G047450.13
Wheat TraesCS2B02G275000 , TraesCS2A02G225100 , TraesCS2A02G225100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G085100 MYB family transcription factor, putative, expressed -
2 Sobic.003G150800 preprotein translocase subunit secA, chloroplast precursor, putative, expressed K03070: preprotein translocase subunit SecA
3 Sobic.005G111550 - -
4 Sobic.005G063000 short chain dehydrogenase/reductase protein, putative, expressed -
5 Sobic.004G235600 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
6 Sobic.001G001300 rhodanese-like domain containing protein, putative, expressed -
7 Sobic.008G001900 mitochondrial substrate carrier family protein, putative, expressed -
8 Sobic.005G001700 mitochondrial substrate carrier family protein, putative, expressed -
9 Sobic.010G214100 D-3-phosphoglycerate dehydrogenase, chloroplast precursor, putative, expressed K00058: serA, D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase
10 Sobic.002G402700 -(PubMedID : 26976818)@ferredoxin-dependent glutamate synthase, chloroplast precursor, putative, expressed K00284: GLU, glutamate synthase (ferredoxin)
11 Sobic.004G211600 psaB translation factor, putative, expressed -
12 Sobic.003G160800 tetratricopeptide repeat domain containing protein, expressed -
13 Sobic.003G332700 Os1bglu5 - beta-glucosidase homologue, similar to G. max isohydroxyurate hydrolase, expressed K01188: beta-glucosidase
14 Sobic.001G183000 peptidase M50 family protein, putative, expressed -
15 Sobic.001G037500 expressed protein -
16 Sobic.002G042500 valyl-tRNA synthetase, putative, expressed K01873: VARS, valyl-tRNA synthetase
17 Sobic.006G101500 expressed protein -
18 Sobic.005G204200 peptide chain release factor protein, putative, expressed K02835: prfA, MTRF1, peptide chain release factor 1
19 Sobic.006G260800 phosphatidate cytidylyltransferase, putative, expressed K18678: phytol kinase
20 Sobic.009G024300 inner membrane protein alx, putative, expressed -


Gene co-expression network
sample Sobic002G314400 Sobic002G314400 Sobic003G085100 Sobic003G085100 Sobic002G314400--Sobic003G085100 Sobic003G150800 Sobic003G150800 Sobic002G314400--Sobic003G150800 Sobic005G111550 Sobic005G111550 Sobic002G314400--Sobic005G111550 Sobic005G063000 Sobic005G063000 Sobic002G314400--Sobic005G063000 Sobic004G235600 Sobic004G235600 Sobic002G314400--Sobic004G235600 Sobic001G001300 Sobic001G001300 Sobic002G314400--Sobic001G001300 Sobic008G001900 Sobic008G001900 Sobic002G314400--Sobic008G001900 Sobic005G001700 Sobic005G001700 Sobic002G314400--Sobic005G001700 Sobic010G214100 Sobic010G214100 Sobic002G314400--Sobic010G214100 Sobic003G085100--Sobic003G150800 Sobic007G005400 Sobic007G005400 Sobic003G085100--Sobic007G005400 Sobic003G085100--Sobic005G111550 Sobic003G160800 Sobic003G160800 Sobic003G085100--Sobic003G160800 Sobic003G085100--Sobic005G063000 Sobic003G233700 Sobic003G233700 Sobic003G085100--Sobic003G233700 Sobic003G085100--Sobic001G001300 Sobic003G287900 Sobic003G287900 Sobic003G085100--Sobic003G287900 Sobic003G085100--Sobic008G001900 Sobic003G150800--Sobic003G085100 Sobic002G042500 Sobic002G042500 Sobic003G150800--Sobic002G042500 Sobic003G150800--Sobic005G111550 Sobic003G150800--Sobic007G005400 Sobic001G037500 Sobic001G037500 Sobic003G150800--Sobic001G037500 Sobic003G150800--Sobic005G063000 Sobic003G150800--Sobic002G314400 Sobic004G328400 Sobic004G328400 Sobic003G150800--Sobic004G328400 Sobic003G141100 Sobic003G141100 Sobic003G150800--Sobic003G141100 Sobic005G111550--Sobic003G085100 Sobic005G111550--Sobic003G150800 Sobic005G111550--Sobic002G042500 Sobic005G111550--Sobic003G160800 Sobic001G500600 Sobic001G500600 Sobic005G111550--Sobic001G500600 Sobic005G111550--Sobic001G037500 Sobic004G298900 Sobic004G298900 Sobic005G111550--Sobic004G298900 Sobic005G111550--Sobic005G063000 Sobic001G465700 Sobic001G465700 Sobic005G111550--Sobic001G465700 Sobic004G211600 Sobic004G211600 Sobic005G063000--Sobic004G211600 Sobic005G204200 Sobic005G204200 Sobic005G063000--Sobic005G204200 Sobic009G121000 Sobic009G121000 Sobic005G063000--Sobic009G121000 Sobic005G063000--Sobic005G001700 Sobic005G063000--Sobic003G085100 Sobic005G063000--Sobic003G160800 Sobic005G063000--Sobic010G214100 Sobic007G103400 Sobic007G103400 Sobic005G063000--Sobic007G103400 Sobic010G043800 Sobic010G043800 Sobic005G063000--Sobic010G043800 Sobic004G235600--Sobic008G001900 Sobic001G073900 Sobic001G073900 Sobic004G235600--Sobic001G073900 Sobic003G442700 Sobic003G442700 Sobic004G235600--Sobic003G442700 Sobic003G332700 Sobic003G332700 Sobic004G235600--Sobic003G332700 Sobic004G235600--Sobic003G085100 Sobic004G235600--Sobic005G001700 Sobic004G235600--Sobic002G314400 Sobic004G235600--Sobic002G042500 Sobic004G235600--Sobic001G465700 Sobic006G280800 Sobic006G280800 Sobic001G001300--Sobic006G280800 Sobic001G001300--Sobic003G085100 Sobic001G001300--Sobic003G160800 Sobic002G133900 Sobic002G133900 Sobic001G001300--Sobic002G133900 Sobic009G148500 Sobic009G148500 Sobic001G001300--Sobic009G148500 Sobic001G001300--Sobic005G111550 Sobic001G001300--Sobic003G287900 Sobic001G001300--Sobic001G500600 Sobic001G134700 Sobic001G134700 Sobic001G001300--Sobic001G134700 Sobic008G001900--Sobic005G001700 Sobic008G001900--Sobic001G073900 Sobic008G001900--Sobic004G235600 Sobic008G001900--Sobic003G085100 Sobic008G001900--Sobic003G332700 Sobic004G054400 Sobic004G054400 Sobic008G001900--Sobic004G054400 Sobic008G001900--Sobic005G063000 Sobic008G001900--Sobic005G204200 Sobic008G001900--Sobic001G465700 Sobic005G001700--Sobic008G001900 Sobic002G220900 Sobic002G220900 Sobic005G001700--Sobic002G220900 Sobic005G001700--Sobic005G204200 Sobic010G067100 Sobic010G067100 Sobic005G001700--Sobic010G067100 Sobic005G001700--Sobic005G063000 Sobic003G185900 Sobic003G185900 Sobic005G001700--Sobic003G185900 Sobic002G402700 Sobic002G402700 Sobic005G001700--Sobic002G402700 Sobic003G036200 Sobic003G036200 Sobic005G001700--Sobic003G036200 Sobic007G009200 Sobic007G009200 Sobic005G001700--Sobic007G009200 Sobic006G101500 Sobic006G101500 Sobic010G214100--Sobic006G101500 Sobic010G214100--Sobic003G160800 Sobic003G387100 Sobic003G387100 Sobic010G214100--Sobic003G387100 Sobic010G214100--Sobic005G063000 Sobic009G125400 Sobic009G125400 Sobic010G214100--Sobic009G125400 Sobic007G085800 Sobic007G085800 Sobic010G214100--Sobic007G085800 Sobic010G214100--Sobic004G211600 Sobic008G116300 Sobic008G116300 Sobic010G214100--Sobic008G116300 Sobic007G052400 Sobic007G052400 Sobic010G214100--Sobic007G052400
Octagon: transcription factors


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