Gene annotation
Transcriptome id Sobic.003G014300.2
Synonym Sb03g001420
Functional annotation expressed protein
UniProt A0A1B6Q0T0
Pfam PF12680
Panther DB PTHR31094
NCBI CDD KOG4457; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46220 : Uncharacterized conserved protein (DUF2358)
RAP-DB (Rice) LOC_Os01g12200.1 : expressed protein
MaizeGDB (Corn) Zm00025a022878 , Zm00025a035945
Brachypodium KQK03343
Barley HORVU3Hr1G030040.2 , HORVU3Hr1G030040.1
Wheat TraesCS3D02G155800 , TraesCS3B02G174500 , TraesCS3A02G147900
Populus -


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cDNA sequences
Sobic.003G014300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
2 Sobic.004G298900 OR, putative, expressed -
3 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
4 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
5 Sobic.003G037300 Twin LOV 1, putative, expressed -
6 Sobic.001G512500 expressed protein -
7 Sobic.005G175500 TKL_IRAK_DUF26-lc.25 - DUF26 kinases have homology to DUF26 containing loci, expressed -
8 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
9 Sobic.004G151500 AP2 domain containing protein, expressed -
10 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
11 Sobic.010G189200 pentatricopeptide, putative, expressed -
12 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
13 Sobic.001G072700 expressed protein -
14 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
15 Sobic.008G146900 "similar to Leucine Rich Repeat family protein, expressed"(PubMedID : 29862293)@disease resistance protein, putative, expressed -
16 Sobic.009G219100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@"serine/threonine-protein kinase SNT7, chloroplast precursor"("PubMedID : 26759170,PubMedID : 24597475")@serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed -
17 Sobic.010G140600 bolA, putative, expressed -
18 Sobic.009G207900 expressed protein -
19 Sobic.002G354600 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
20 Sobic.002G136100 genetic modifier, putative, expressed -


Gene co-expression network
sample Sobic003G014300 Sobic003G014300 Sobic006G258700 Sobic006G258700 Sobic003G014300--Sobic006G258700 Sobic004G298900 Sobic004G298900 Sobic003G014300--Sobic004G298900 Sobic010G269400 Sobic010G269400 Sobic003G014300--Sobic010G269400 Sobic004G300000 Sobic004G300000 Sobic003G014300--Sobic004G300000 Sobic003G037300 Sobic003G037300 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic006G258700--Sobic003G014300 Sobic006G258700--Sobic010G269400 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic006G258700--Sobic004G300000 Sobic001G286600 Sobic001G286600 Sobic006G258700--Sobic001G286600 Sobic001G404500 Sobic001G404500 Sobic006G258700--Sobic001G404500 Sobic004G298900--Sobic003G037300 Sobic009G062400 Sobic009G062400 Sobic004G298900--Sobic009G062400 Sobic004G298900--Sobic006G258700 Sobic008G006100 Sobic008G006100 Sobic004G298900--Sobic008G006100 Sobic004G298900--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic010G269400--Sobic003G037300 Sobic010G269400--Sobic003G014300 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic010G269400--Sobic009G062400 Sobic004G300000--Sobic010G035500 Sobic002G025700 Sobic002G025700 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic006G214700 Sobic006G214700 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic003G037300--Sobic004G298900 Sobic003G037300--Sobic009G062400 Sobic003G037300--Sobic008G006100 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic003G037300--Sobic001G286600 Sobic004G054400 Sobic004G054400 Sobic001G512500--Sobic004G054400 Sobic001G032700 Sobic001G032700 Sobic001G512500--Sobic001G032700 Sobic001G124800 Sobic001G124800 Sobic001G512500--Sobic001G124800 Sobic001G512500--Sobic003G014300 Sobic001G512500--Sobic004G298900 Sobic003G343500 Sobic003G343500 Sobic001G512500--Sobic003G343500 Sobic001G512500--Sobic010G058200 Sobic004G026500 Sobic004G026500 Sobic001G512500--Sobic004G026500 Sobic001G512500--Sobic003G037300 Sobic005G175500--Sobic003G014300 Sobic005G175500--Sobic006G258700 Sobic005G175600 Sobic005G175600 Sobic005G175500--Sobic005G175600 Sobic005G175500--Sobic004G300000 Sobic006G060601 Sobic006G060601 Sobic005G175500--Sobic006G060601 Sobic001G224900 Sobic001G224900 Sobic005G175500--Sobic001G224900 Sobic005G175500--Sobic001G404500 Sobic009G019100 Sobic009G019100 Sobic005G175500--Sobic009G019100 Sobic010G207500 Sobic010G207500 Sobic005G175500--Sobic010G207500 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic010G035500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic010G035500--Sobic006G193200 Sobic004G151500--Sobic004G298900 Sobic004G268300 Sobic004G268300 Sobic004G151500--Sobic004G268300 Sobic004G151500--Sobic003G014300 Sobic004G151500--Sobic003G037300 Sobic008G052900 Sobic008G052900 Sobic004G151500--Sobic008G052900 Sobic004G151500--Sobic009G062400 Sobic004G151500--Sobic006G258700 Sobic004G151500--Sobic006G260800 Sobic001G183000 Sobic001G183000 Sobic004G151500--Sobic001G183000
Octagon: transcription factors


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