Gene annotation
Transcriptome id Sobic.001G072700.1
Synonym Sb01g006540
Functional annotation expressed protein
UniProt C5WZ51
Pfam -
Panther DB PTHR10996 PTHR10996:SF123
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19400 : Erythronate-4-phosphate dehydrogenase family protein
RAP-DB (Rice) LOC_Os03g56420.1 : expressed protein
MaizeGDB (Corn) Zm00025a008387
Brachypodium KQK12962
Barley HORVU5Hr1G099200.6 , HORVU5Hr1G099200.5 , HORVU5Hr1G099200.4 , HORVU5Hr1G099200.3 , HORVU5Hr1G099200.2 , HORVU5Hr1G099200.1
Wheat TraesCS5B02G413800 , TraesCS5D02G418900 , TraesCS5A02G409100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G227700 expressed protein -
2 Sobic.004G026500 expressed protein -
3 Sobic.010G140600 bolA, putative, expressed -
4 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
5 Sobic.003G037300 Twin LOV 1, putative, expressed -
6 Sobic.009G014100 OsFBX178 - F-box domain containing protein, expressed -
7 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
8 Sobic.003G014300 expressed protein -
9 Sobic.004G298900 OR, putative, expressed -
10 Sobic.001G512500 expressed protein -
11 Sobic.007G150100 HD domain containing protein, putative, expressed -
12 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
13 Sobic.003G340600 VHS and GAT domain containing protein, expressed -
14 Sobic.004G207400 hydroxymethylbutenyl 4-diphosphate synthase, putative, expressed K03526: gcpE, (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase
15 Sobic.003G203300 stress regulated protein, putative, expressed -
16 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
17 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
18 Sobic.002G136100 genetic modifier, putative, expressed -
19 Sobic.003G108900 -(PubMedID : 26465154)@peptidase, putative, expressed -
20 Sobic.002G001000 transmembrane amino acid transporter protein, putative, expressed -


Gene co-expression network
sample Sobic001G072700 Sobic001G072700 Sobic007G227700 Sobic007G227700 Sobic001G072700--Sobic007G227700 Sobic004G026500 Sobic004G026500 Sobic001G072700--Sobic004G026500 Sobic010G140600 Sobic010G140600 Sobic001G072700--Sobic010G140600 Sobic008G172300 Sobic008G172300 Sobic001G072700--Sobic008G172300 Sobic003G037300 Sobic003G037300 Sobic001G072700--Sobic003G037300 Sobic009G014100 Sobic009G014100 Sobic001G072700--Sobic009G014100 Sobic006G173600 Sobic006G173600 Sobic001G072700--Sobic006G173600 Sobic003G014300 Sobic003G014300 Sobic001G072700--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G072700--Sobic004G298900 Sobic007G169300 Sobic007G169300 Sobic007G227700--Sobic007G169300 Sobic007G227700--Sobic001G072700 Sobic007G227700--Sobic004G026500 Sobic002G193100 Sobic002G193100 Sobic007G227700--Sobic002G193100 Sobic007G227700--Sobic010G140600 Sobic001G029200 Sobic001G029200 Sobic007G227700--Sobic001G029200 Sobic002G001000 Sobic002G001000 Sobic007G227700--Sobic002G001000 Sobic008G081900 Sobic008G081900 Sobic007G227700--Sobic008G081900 Sobic002G349100 Sobic002G349100 Sobic007G227700--Sobic002G349100 Sobic004G026500--Sobic008G172300 Sobic001G124100 Sobic001G124100 Sobic004G026500--Sobic001G124100 Sobic009G193500 Sobic009G193500 Sobic004G026500--Sobic009G193500 Sobic001G219700 Sobic001G219700 Sobic004G026500--Sobic001G219700 Sobic004G026500--Sobic001G072700 Sobic002G339300 Sobic002G339300 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic010G269400 Sobic010G269400 Sobic010G140600--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic010G140600--Sobic010G058200 Sobic001G286600 Sobic001G286600 Sobic010G140600--Sobic001G286600 Sobic004G281900 Sobic004G281900 Sobic010G140600--Sobic004G281900 Sobic004G238200 Sobic004G238200 Sobic010G140600--Sobic004G238200 Sobic002G102200 Sobic002G102200 Sobic010G140600--Sobic002G102200 Sobic010G140600--Sobic001G072700 Sobic006G155500 Sobic006G155500 Sobic010G140600--Sobic006G155500 Sobic008G144800 Sobic008G144800 Sobic010G140600--Sobic008G144800 Sobic008G172300--Sobic004G026500 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic002G345700 Sobic002G345700 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic010G197000 Sobic010G197000 Sobic008G172300--Sobic010G197000 Sobic005G142800 Sobic005G142800 Sobic008G172300--Sobic005G142800 Sobic002G168300 Sobic002G168300 Sobic008G172300--Sobic002G168300 Sobic002G167500 Sobic002G167500 Sobic008G172300--Sobic002G167500 Sobic003G037300--Sobic004G298900 Sobic009G062400 Sobic009G062400 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic004G154400 Sobic004G154400 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic003G037300--Sobic001G286600 Sobic009G014100--Sobic010G197000 Sobic009G014100--Sobic008G172300 Sobic002G073200 Sobic002G073200 Sobic009G014100--Sobic002G073200 Sobic003G108900 Sobic003G108900 Sobic009G014100--Sobic003G108900 Sobic009G014100--Sobic004G026500 Sobic002G354600 Sobic002G354600 Sobic009G014100--Sobic002G354600 Sobic004G333400 Sobic004G333400 Sobic009G014100--Sobic004G333400 Sobic003G190000 Sobic003G190000 Sobic009G014100--Sobic003G190000 Sobic009G014100--Sobic002G168300 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic006G173600--Sobic001G072700 Sobic006G258700 Sobic006G258700 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic004G300000 Sobic004G300000 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic004G298900--Sobic003G037300 Sobic004G298900--Sobic009G062400 Sobic004G298900--Sobic006G258700 Sobic004G298900--Sobic008G006100 Sobic004G298900--Sobic003G014300 Sobic004G298900--Sobic002G102200 Sobic005G111550 Sobic005G111550 Sobic004G298900--Sobic005G111550 Sobic004G298900--Sobic004G151500 Sobic006G260800 Sobic006G260800 Sobic004G298900--Sobic006G260800
Octagon: transcription factors


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