Gene annotation
Transcriptome id Sobic.007G150100.2,Sobic.007G150100.1
Synonym AT-RSH2, RSH2, Sb07g022430, ATRSH2
Functional annotation HD domain containing protein, putative, expressed
UniProt A0A1B6PHX0
Pfam PF04607 PF01966
Panther DB PTHR21262:SF14 PTHR21262
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0015969; guanosine tetraphosphate metabolic process


Orthologs (automatic annotation)
TAIR AT1G54130 : RELA/SPOT homolog 3
RAP-DB (Rice) LOC_Os08g35620.1 : HD domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a005744
Brachypodium KQJ98554
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.007G150100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
2 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
3 Sobic.001G048400 pheophorbide a oxygenase, chloroplast precursor, putative, expressed -
4 Sobic.001G504400 expressed protein -
5 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
6 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
7 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
8 Sobic.003G398800 expressed protein -
9 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
10 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
11 Sobic.007G103400 expressed protein -
12 Sobic.007G136200 expressed protein -
13 Sobic.008G039900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@glycine dehydrogenase, putative, expressed K00281: GLDC, glycine dehydrogenase
14 Sobic.010G067100 glutathione peroxidase, putative, expressed K00432: gpx, btuE, glutathione peroxidase
15 Sobic.001G500700 expressed protein -
16 Sobic.001G072700 expressed protein -
17 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
18 Sobic.002G298800 PAP fibrillin family domain containing protein, expressed -
19 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
20 Sobic.006G188000 expressed protein -


Gene co-expression network
sample Sobic007G150100 Sobic007G150100 Sobic001G003200 Sobic001G003200 Sobic007G150100--Sobic001G003200 Sobic006G173600 Sobic006G173600 Sobic007G150100--Sobic006G173600 Sobic001G048400 Sobic001G048400 Sobic007G150100--Sobic001G048400 Sobic001G504400 Sobic001G504400 Sobic007G150100--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic007G150100--Sobic010G043800 Sobic009G056700 Sobic009G056700 Sobic007G150100--Sobic009G056700 Sobic001G169900 Sobic001G169900 Sobic007G150100--Sobic001G169900 Sobic003G398800 Sobic003G398800 Sobic007G150100--Sobic003G398800 Sobic003G110800 Sobic003G110800 Sobic007G150100--Sobic003G110800 Sobic001G003200--Sobic009G056700 Sobic007G053800 Sobic007G053800 Sobic001G003200--Sobic007G053800 Sobic004G121400 Sobic004G121400 Sobic001G003200--Sobic004G121400 Sobic001G003200--Sobic007G150100 Sobic006G188000 Sobic006G188000 Sobic001G003200--Sobic006G188000 Sobic001G003200--Sobic003G398800 Sobic001G003200--Sobic001G048400 Sobic003G431700 Sobic003G431700 Sobic001G003200--Sobic003G431700 Sobic001G003200--Sobic001G504400 Sobic006G173600--Sobic007G150100 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic001G048400--Sobic003G398800 Sobic001G048400--Sobic009G056700 Sobic007G103400 Sobic007G103400 Sobic001G048400--Sobic007G103400 Sobic001G048400--Sobic003G431700 Sobic001G048400--Sobic010G043800 Sobic001G048400--Sobic001G504400 Sobic009G121000 Sobic009G121000 Sobic001G048400--Sobic009G121000 Sobic006G101500 Sobic006G101500 Sobic001G048400--Sobic006G101500 Sobic006G238200 Sobic006G238200 Sobic001G048400--Sobic006G238200 Sobic002G206300 Sobic002G206300 Sobic001G504400--Sobic002G206300 Sobic001G504400--Sobic007G103400 Sobic009G038701 Sobic009G038701 Sobic001G504400--Sobic009G038701 Sobic003G185900 Sobic003G185900 Sobic001G504400--Sobic003G185900 Sobic001G258200 Sobic001G258200 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic008G033000 Sobic008G033000 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G378100 Sobic001G378100 Sobic001G504400--Sobic001G378100 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic009G056700--Sobic003G398800 Sobic009G056700--Sobic003G431700 Sobic002G112400 Sobic002G112400 Sobic009G056700--Sobic002G112400 Sobic009G056700--Sobic007G103400 Sobic003G306200 Sobic003G306200 Sobic009G056700--Sobic003G306200 Sobic008G006100 Sobic008G006100 Sobic009G056700--Sobic008G006100 Sobic002G275300 Sobic002G275300 Sobic009G056700--Sobic002G275300 Sobic002G298800 Sobic002G298800 Sobic009G056700--Sobic002G298800 Sobic001G128600 Sobic001G128600 Sobic009G056700--Sobic001G128600 Sobic001G169900--Sobic010G002700 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic003G398800--Sobic006G238200 Sobic003G398800--Sobic003G306200 Sobic003G398800--Sobic009G056700 Sobic007G009200 Sobic007G009200 Sobic003G398800--Sobic007G009200 Sobic003G398800--Sobic007G103400 Sobic009G129300 Sobic009G129300 Sobic003G398800--Sobic009G129300 Sobic002G220900 Sobic002G220900 Sobic003G398800--Sobic002G220900 Sobic003G398800--Sobic003G431700 Sobic001G491000 Sobic001G491000 Sobic003G398800--Sobic001G491000 Sobic001G465700 Sobic001G465700 Sobic003G110800--Sobic001G465700 Sobic006G092000 Sobic006G092000 Sobic003G110800--Sobic006G092000 Sobic002G091600 Sobic002G091600 Sobic003G110800--Sobic002G091600 Sobic003G110800--Sobic006G173600 Sobic006G031800 Sobic006G031800 Sobic003G110800--Sobic006G031800 Sobic004G026500 Sobic004G026500 Sobic003G110800--Sobic004G026500 Sobic001G530900 Sobic001G530900 Sobic003G110800--Sobic001G530900 Sobic003G110800--Sobic001G003200 Sobic003G110800--Sobic006G158100
Octagon: transcription factors


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