Gene annotation
Transcriptome id Sobic.006G173600.2
Synonym ATSR, Sb06g024890, SR
Functional annotation serine racemase, putative, expressed
UniProt Q6JAG1 , A0A1B6PMH2
Pfam PF00291
Panther DB PTHR10314 PTHR10314:SF36
NCBI CDD KOG1251; Serine racemase
KEGG Orthology K12235; serine racemase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G11640 : serine racemase
RAP-DB (Rice) LOC_Os04g46930.2 : serine racemase, putative, expressed
MaizeGDB (Corn) Zm00025a010265
Brachypodium -
Barley -
Wheat TraesCS2A02G410500 , TraesCS2A02G410500 , TraesCS2D02G407900 , TraesCS2D02G407900 , TraesCS2D02G407900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G150100 HD domain containing protein, putative, expressed -
2 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
3 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
4 Sobic.003G219200 MEE18, putative, expressed -
5 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
6 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
7 Sobic.007G136200 expressed protein -
8 Sobic.K031800 inositol-1-monophosphatase, putative, expressed K01082: cysQ, MET22, 3'(2'), 5'-bisphosphate nucleotidase
9 Sobic.001G072700 expressed protein -
10 Sobic.002G091600 methyltransferase, putative, expressed -
11 Sobic.006G092000 expressed protein K18172: COX assembly mitochondrial protein 2
12 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
13 Sobic.002G257750 - -
14 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
15 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
16 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
17 Sobic.001G437100 expressed protein -
18 Sobic.003G370700 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS1-18 - C2H2 zinc finger protein, expressed -
19 Sobic.001G303200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
20 Sobic.003G340600 VHS and GAT domain containing protein, expressed -


Gene co-expression network
sample Sobic006G173600 Sobic006G173600 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G158100 Sobic006G158100 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic001G003200 Sobic001G003200 Sobic007G150100--Sobic001G003200 Sobic007G150100--Sobic006G173600 Sobic001G048400 Sobic001G048400 Sobic007G150100--Sobic001G048400 Sobic001G504400 Sobic001G504400 Sobic007G150100--Sobic001G504400 Sobic010G043800 Sobic010G043800 Sobic007G150100--Sobic010G043800 Sobic009G056700 Sobic009G056700 Sobic007G150100--Sobic009G056700 Sobic001G169900 Sobic001G169900 Sobic007G150100--Sobic001G169900 Sobic003G398800 Sobic003G398800 Sobic007G150100--Sobic003G398800 Sobic007G150100--Sobic003G110800 Sobic001G465700 Sobic001G465700 Sobic003G110800--Sobic001G465700 Sobic006G092000 Sobic006G092000 Sobic003G110800--Sobic006G092000 Sobic002G091600 Sobic002G091600 Sobic003G110800--Sobic002G091600 Sobic003G110800--Sobic006G173600 Sobic006G031800 Sobic006G031800 Sobic003G110800--Sobic006G031800 Sobic004G026500 Sobic004G026500 Sobic003G110800--Sobic004G026500 Sobic001G530900 Sobic001G530900 Sobic003G110800--Sobic001G530900 Sobic003G110800--Sobic001G003200 Sobic003G110800--Sobic006G158100 Sobic008G115900--Sobic007G136200 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic001G491000 Sobic001G491000 Sobic008G115900--Sobic001G491000 Sobic003G219200--SobicK031800 Sobic010G035400 Sobic010G035400 Sobic003G219200--Sobic010G035400 Sobic002G275300 Sobic002G275300 Sobic003G219200--Sobic002G275300 Sobic006G102000 Sobic006G102000 Sobic003G219200--Sobic006G102000 Sobic009G237100 Sobic009G237100 Sobic003G219200--Sobic009G237100 Sobic007G103400 Sobic007G103400 Sobic003G219200--Sobic007G103400 Sobic009G237000 Sobic009G237000 Sobic003G219200--Sobic009G237000 Sobic003G219200--Sobic006G207800 Sobic001G100000 Sobic001G100000 Sobic003G219200--Sobic001G100000 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic004G178100--Sobic010G043800 Sobic004G178100--Sobic006G173600 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic004G178100--Sobic001G516901 Sobic007G136200--Sobic006G158100 Sobic007G136200--Sobic010G043800 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G136200--Sobic007G103400 Sobic007G136200--Sobic001G169900 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 SobicK031800--Sobic003G219200 Sobic008G188600 Sobic008G188600 SobicK031800--Sobic008G188600 Sobic003G387100 Sobic003G387100 SobicK031800--Sobic003G387100 Sobic009G175500 Sobic009G175500 SobicK031800--Sobic009G175500 Sobic005G149400 Sobic005G149400 SobicK031800--Sobic005G149400 Sobic004G336200 Sobic004G336200 SobicK031800--Sobic004G336200 SobicK031800--Sobic010G035400 SobicK031800--Sobic002G275300 SobicK031800--Sobic006G102000 Sobic007G227700 Sobic007G227700 Sobic001G072700--Sobic007G227700 Sobic001G072700--Sobic004G026500 Sobic010G140600 Sobic010G140600 Sobic001G072700--Sobic010G140600 Sobic008G172300 Sobic008G172300 Sobic001G072700--Sobic008G172300 Sobic003G037300 Sobic003G037300 Sobic001G072700--Sobic003G037300 Sobic009G014100 Sobic009G014100 Sobic001G072700--Sobic009G014100 Sobic001G072700--Sobic006G173600 Sobic003G014300 Sobic003G014300 Sobic001G072700--Sobic003G014300 Sobic004G298900 Sobic004G298900 Sobic001G072700--Sobic004G298900
Octagon: transcription factors


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