Gene annotation
Transcriptome id Sobic.008G115900.2,Sobic.008G115900.9,Sobic.008G115900.8,Sobic.008G115900.1,Sobic.008G115900.7,Sobic.008G115900.11,Sobic.008G115900.12,Sobic.008G115900.10
Synonym Sb08g016960
Functional annotation mitochondrial carrier protein, putative, expressed
UniProt A0A1B6PD46 , A0A1Z5R622 , A0A1Z5R677 , A0A1B6PD82 , A0A1B6PD40
Pfam PF00153
Panther DB PTHR24089 PTHR24089:SF80
NCBI CDD KOG0753; Mitochondrial fatty acid anion carrier protein/Uncoupling protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G03115 : Mitochondrial substrate carrier family protein
RAP-DB (Rice) LOC_Os12g34870.1,LOC_Os12g34870.2 : mitochondrial carrier protein, putative, expressed
MaizeGDB (Corn) Zm00025a054371
Brachypodium KQJ86496 , KQJ86497 , KQJ86495
Barley HORVU5Hr1G026160.18 , HORVU5Hr1G026160.19 , HORVU5Hr1G026160.12 , HORVU5Hr1G026160.13 , HORVU5Hr1G026160.10 , HORVU5Hr1G026160.11 , HORVU5Hr1G026160.16 , HORVU5Hr1G026160.17 , HORVU5Hr1G026160.14 , HORVU5Hr1G026160.15 , HORVU5Hr1G026160.23 , HORVU5Hr1G026160.22 , HORVU5Hr1G026160.21 , HORVU5Hr1G026160.20 , HORVU5Hr1G026160.27 , HORVU5Hr1G026160.26 , HORVU5Hr1G026160.25 , HORVU5Hr1G026160.24 , HORVU5Hr1G026160.1 , HORVU5Hr1G026160.2 , HORVU5Hr1G026160.3 , HORVU5Hr1G026160.4 , HORVU5Hr1G026160.5 , HORVU5Hr1G026160.7 , HORVU5Hr1G026160.9 , HORVU5Hr1G026160.8
Wheat TraesCS5A02G096600 , TraesCS5B02G102500 , TraesCS5B02G102500 , TraesCS5A02G096600 , TraesCS5D02G109300 , TraesCS5D02G109300
Populus -


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cDNA sequences
Sobic.008G115900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G136200 expressed protein -
2 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
3 Sobic.006G130300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@-(PubMedID : 26976818)@4-nitrophenylphosphatase, putative, expressed K19269: PGP, phosphoglycolate phosphatase
4 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
5 Sobic.004G356400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
7 Sobic.010G153900 Spermidine synthase(PubMedID : 27325899)@Up-regulated by silicon application under drought stress(PubMedID : 24813726)@"OsSPMS1(Ortholog in rice:Tao et al., 2018)"(PubMedID : 31659935)@spermidine synthase, putative, expressed K00797: speE, SRM, spermidine synthase
8 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
9 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
10 Sobic.007G140800 Fatty acid desaturase 6 (omega-6 fatty acid desaturase) FAD6 (At)(PubMedID : 27208977)@omega-6 fatty acid desaturase, chloroplast precursor, putative, expressed K10255: FAD6, acyl-lipid omega-6 desaturase (Delta-12 desaturase)
11 Sobic.009G237100 -(PubMedID : 26976818)@bile acid sodium symporter, putative, expressed K14347: SLC10A7, solute carrier family 10 (sodium/bile acid cotransporter), member 7
12 Sobic.001G100000 glucose-1-phosphate adenylyltransferase large subunit, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
13 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
14 Sobic.006G114900 - -
15 Sobic.006G093800 GRAS family transcription factor domain containing protein, expressed -
16 Sobic.002G172700 Galactose mutarotase-like superfamily protein(PubMedID : 26465154)@aldose 1-epimerase, putative, expressed K01792: glucose-6-phosphate 1-epimerase
17 Sobic.007G123500 sulfate transporter, putative, expressed K17470: sulfate transporter 1, high-affinity
18 Sobic.008G130000 PPR repeat domain containing protein, putative, expressed -
19 Sobic.007G108900 APE1, putative, expressed -
20 Sobic.006G238200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family domain containing protein, expressed -


Gene co-expression network
sample Sobic008G115900 Sobic008G115900 Sobic007G136200 Sobic007G136200 Sobic008G115900--Sobic007G136200 Sobic006G158100 Sobic006G158100 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic003G229300 Sobic003G229300 Sobic008G115900--Sobic003G229300 Sobic001G491000 Sobic001G491000 Sobic008G115900--Sobic001G491000 Sobic007G136200--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic007G136200--Sobic010G043800 Sobic001G504400 Sobic001G504400 Sobic007G136200--Sobic001G504400 Sobic010G002700 Sobic010G002700 Sobic007G136200--Sobic010G002700 Sobic007G103400 Sobic007G103400 Sobic007G136200--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic007G136200--Sobic001G169900 Sobic004G337400 Sobic004G337400 Sobic007G136200--Sobic004G337400 Sobic007G108900 Sobic007G108900 Sobic007G136200--Sobic007G108900 Sobic001G378100 Sobic001G378100 Sobic007G136200--Sobic001G378100 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic001G100000 Sobic001G100000 Sobic006G130300--Sobic001G100000 Sobic006G238200 Sobic006G238200 Sobic006G130300--Sobic006G238200 Sobic007G140800 Sobic007G140800 Sobic006G130300--Sobic007G140800 Sobic001G020100 Sobic001G020100 Sobic006G130300--Sobic001G020100 Sobic001G329400 Sobic001G329400 Sobic006G130300--Sobic001G329400 Sobic006G130300--Sobic001G491000 Sobic004G283100 Sobic004G283100 Sobic006G130300--Sobic004G283100 Sobic006G130300--Sobic008G115900 Sobic006G130300--Sobic006G207800 Sobic001G102800 Sobic001G102800 Sobic006G207800--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic006G207800--Sobic009G237100 Sobic007G009200 Sobic007G009200 Sobic006G207800--Sobic007G009200 Sobic003G387100 Sobic003G387100 Sobic006G207800--Sobic003G387100 Sobic009G043000 Sobic009G043000 Sobic006G207800--Sobic009G043000 Sobic010G035400 Sobic010G035400 Sobic006G207800--Sobic010G035400 Sobic003G431700 Sobic003G431700 Sobic006G207800--Sobic003G431700 Sobic010G201700 Sobic010G201700 Sobic006G207800--Sobic010G201700 Sobic006G207800--Sobic006G238200 Sobic004G356400--Sobic001G017300 Sobic005G101200 Sobic005G101200 Sobic004G356400--Sobic005G101200 Sobic004G356400--Sobic006G158100 Sobic004G356400--Sobic003G185900 Sobic007G105500 Sobic007G105500 Sobic004G356400--Sobic007G105500 Sobic001G303200 Sobic001G303200 Sobic004G356400--Sobic001G303200 Sobic004G356400--Sobic009G237100 Sobic004G189800 Sobic004G189800 Sobic004G356400--Sobic004G189800 Sobic004G356400--Sobic001G258200 Sobic001G017300--Sobic006G158100 Sobic001G017300--Sobic004G356400 Sobic006G093800 Sobic006G093800 Sobic001G017300--Sobic006G093800 Sobic010G249700 Sobic010G249700 Sobic001G017300--Sobic010G249700 Sobic001G017300--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic001G017300--Sobic003G276300 Sobic001G017300--Sobic005G101200 Sobic001G017300--Sobic001G169900 Sobic001G017300--Sobic010G002700 Sobic010G153900--Sobic007G140800 Sobic008G188600 Sobic008G188600 Sobic010G153900--Sobic008G188600 Sobic010G153900--Sobic009G043000 Sobic010G153900--Sobic010G201700 Sobic003G303700 Sobic003G303700 Sobic010G153900--Sobic003G303700 Sobic010G095000 Sobic010G095000 Sobic010G153900--Sobic010G095000 Sobic010G153900--Sobic006G207800 Sobic003G241900 Sobic003G241900 Sobic010G153900--Sobic003G241900 Sobic010G153900--Sobic001G020100 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic003G229300--Sobic001G169900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic001G491000--Sobic006G238200 Sobic010G181300 Sobic010G181300 Sobic001G491000--Sobic010G181300 Sobic001G491000--Sobic001G100000 Sobic002G275300 Sobic002G275300 Sobic001G491000--Sobic002G275300 Sobic001G289500 Sobic001G289500 Sobic001G491000--Sobic001G289500 Sobic009G129300 Sobic009G129300 Sobic001G491000--Sobic009G129300 Sobic002G370600 Sobic002G370600 Sobic001G491000--Sobic002G370600 Sobic001G491000--Sobic009G237100 Sobic004G305800 Sobic004G305800 Sobic001G491000--Sobic004G305800
Octagon: transcription factors


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