Gene annotation
Transcriptome id Sobic.006G092000.1
Synonym Sb06g017710
Functional annotation expressed protein
UniProt C5Y962
Pfam PF08583
Panther DB PTHR22977
NCBI CDD KOG4148; Uncharacterized conserved protein
KEGG Orthology K18172; COX assembly mitochondrial protein 2
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G21192 : Cytochrome c oxidase biogenesis protein Cmc1-like
RAP-DB (Rice) LOC_Os02g35315.2 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
2 Sobic.005G100600 bZIP transcription factor domain containing protein, expressed -
3 Sobic.004G193700 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
4 Sobic.005G059800 RNA recognition motif containing protein, putative, expressed K14407: CSTF2, cleavage stimulation factor subunit 2
5 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
6 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
7 Sobic.008G115900 mitochondrial carrier protein, putative, expressed -
8 Sobic.002G091600 methyltransferase, putative, expressed -
9 Sobic.001G516901 - -
10 Sobic.010G171600 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04733: interleukin-1 receptor-associated kinase 4
11 Sobic.001G133000 expressed protein -
12 Sobic.003G217700 - -
13 Sobic.007G136200 expressed protein -
14 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
15 Sobic.001G085600 ABC transporter, ATP-binding protein, putative, expressed -
16 Sobic.003G262200 E3 ubiquitin ligase, putative, expressed K16276: K16276, zinc finger protein-like protein
17 Sobic.007G150100 HD domain containing protein, putative, expressed -
18 Sobic.006G031800 - -
19 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
20 Sobic.004G026500 expressed protein -


Gene co-expression network
sample Sobic006G092000 Sobic006G092000 Sobic003G110800 Sobic003G110800 Sobic006G092000--Sobic003G110800 Sobic005G100600 Sobic005G100600 Sobic006G092000--Sobic005G100600 Sobic004G193700 Sobic004G193700 Sobic006G092000--Sobic004G193700 Sobic005G059800 Sobic005G059800 Sobic006G092000--Sobic005G059800 Sobic003G229300 Sobic003G229300 Sobic006G092000--Sobic003G229300 Sobic006G173600 Sobic006G173600 Sobic006G092000--Sobic006G173600 Sobic008G115900 Sobic008G115900 Sobic006G092000--Sobic008G115900 Sobic002G091600 Sobic002G091600 Sobic006G092000--Sobic002G091600 Sobic001G516901 Sobic001G516901 Sobic006G092000--Sobic001G516901 Sobic001G465700 Sobic001G465700 Sobic003G110800--Sobic001G465700 Sobic003G110800--Sobic006G092000 Sobic003G110800--Sobic002G091600 Sobic003G110800--Sobic006G173600 Sobic006G031800 Sobic006G031800 Sobic003G110800--Sobic006G031800 Sobic004G026500 Sobic004G026500 Sobic003G110800--Sobic004G026500 Sobic001G530900 Sobic001G530900 Sobic003G110800--Sobic001G530900 Sobic001G003200 Sobic001G003200 Sobic003G110800--Sobic001G003200 Sobic006G158100 Sobic006G158100 Sobic003G110800--Sobic006G158100 Sobic005G100600--Sobic006G092000 Sobic007G136800 Sobic007G136800 Sobic005G100600--Sobic007G136800 Sobic001G085600 Sobic001G085600 Sobic005G100600--Sobic001G085600 Sobic005G100600--Sobic003G110800 Sobic005G100600--Sobic001G465700 Sobic006G038500 Sobic006G038500 Sobic005G100600--Sobic006G038500 Sobic005G100600--Sobic006G173600 Sobic001G261545 Sobic001G261545 Sobic005G100600--Sobic001G261545 Sobic005G100600--Sobic002G091600 Sobic004G193700--Sobic002G091600 Sobic003G262200 Sobic003G262200 Sobic004G193700--Sobic003G262200 Sobic004G193700--Sobic003G229300 Sobic004G193700--Sobic006G092000 Sobic003G253600 Sobic003G253600 Sobic004G193700--Sobic003G253600 Sobic003G119600 Sobic003G119600 Sobic004G193700--Sobic003G119600 Sobic004G193700--Sobic005G059800 Sobic004G193700--Sobic001G085600 Sobic006G185100 Sobic006G185100 Sobic004G193700--Sobic006G185100 Sobic010G032900 Sobic010G032900 Sobic005G059800--Sobic010G032900 Sobic002G294800 Sobic002G294800 Sobic005G059800--Sobic002G294800 Sobic005G059800--Sobic006G185100 Sobic001G194200 Sobic001G194200 Sobic005G059800--Sobic001G194200 Sobic003G155100 Sobic003G155100 Sobic005G059800--Sobic003G155100 Sobic003G011300 Sobic003G011300 Sobic005G059800--Sobic003G011300 Sobic008G044100 Sobic008G044100 Sobic005G059800--Sobic008G044100 Sobic008G070800 Sobic008G070800 Sobic005G059800--Sobic008G070800 Sobic003G398700 Sobic003G398700 Sobic005G059800--Sobic003G398700 Sobic003G191700 Sobic003G191700 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic006G133900 Sobic006G133900 Sobic003G229300--Sobic006G133900 Sobic004G042200 Sobic004G042200 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic003G229300--Sobic008G115900 Sobic007G198300 Sobic007G198300 Sobic003G229300--Sobic007G198300 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic006G173600--Sobic003G110800 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G173600--Sobic006G158100 Sobic004G178100 Sobic004G178100 Sobic006G173600--Sobic004G178100 Sobic007G136200 Sobic007G136200 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic008G115900--Sobic007G136200 Sobic008G115900--Sobic006G158100 Sobic006G130300 Sobic006G130300 Sobic008G115900--Sobic006G130300 Sobic006G207800 Sobic006G207800 Sobic008G115900--Sobic006G207800 Sobic004G356400 Sobic004G356400 Sobic008G115900--Sobic004G356400 Sobic001G017300 Sobic001G017300 Sobic008G115900--Sobic001G017300 Sobic010G153900 Sobic010G153900 Sobic008G115900--Sobic010G153900 Sobic008G115900--Sobic003G229300 Sobic001G491000 Sobic001G491000 Sobic008G115900--Sobic001G491000 Sobic002G091600--Sobic004G193700 Sobic002G091600--Sobic003G110800 Sobic002G091600--Sobic007G136200 Sobic002G091600--Sobic003G119600 Sobic001G097100 Sobic001G097100 Sobic002G091600--Sobic001G097100 Sobic002G091600--Sobic001G530900 Sobic005G084500 Sobic005G084500 Sobic002G091600--Sobic005G084500 Sobic009G215500 Sobic009G215500 Sobic002G091600--Sobic009G215500 Sobic005G106600 Sobic005G106600 Sobic002G091600--Sobic005G106600 Sobic001G500600 Sobic001G500600 Sobic001G516901--Sobic001G500600 Sobic006G197300 Sobic006G197300 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800
Octagon: transcription factors


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