Gene annotation
Transcriptome id Sobic.004G178100.1
Synonym Sb04g022790
Functional annotation uncharacterized oxidoreductase yoxD, putative, expressed
UniProt C5XUU0
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF500
NCBI CDD KOG0725; Reductases with broad range of substrate specificities
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G10310 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g35170.1 : uncharacterized oxidoreductase yoxD, putative, expressed
MaizeGDB (Corn) Zm00025a020688
Brachypodium KQJ99902
Barley -
Wheat TraesCS6B02G230200 , TraesCS6D02G181700
Populus -


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cDNA sequences
Sobic.004G178100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G000600 glycosyl transferase, group 1 domain containing protein, expressed K06119: sulfoquinovosyltransferase
2 Sobic.002G020400 PDV2, putative, expressed -
3 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
4 Sobic.006G173600 serine racemase, putative, expressed K12235: serine racemase
5 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
6 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
7 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
8 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
9 Sobic.001G516901 - -
10 Sobic.002G239300 OsFBX338 - F-box domain containing protein, expressed -
11 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
12 Sobic.007G136200 expressed protein -
13 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
14 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
15 Sobic.004G183000 - -
16 Sobic.002G257750 - -
17 Sobic.007G023200 OsFBX178 - F-box domain containing protein, expressed -
18 Sobic.003G110800 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
19 Sobic.004G182900 PHD finger protein, putative, expressed -
20 Sobic.007G136800 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2


Gene co-expression network
sample Sobic004G178100 Sobic004G178100 Sobic002G000600 Sobic002G000600 Sobic004G178100--Sobic002G000600 Sobic002G020400 Sobic002G020400 Sobic004G178100--Sobic002G020400 Sobic010G043800 Sobic010G043800 Sobic004G178100--Sobic010G043800 Sobic006G173600 Sobic006G173600 Sobic004G178100--Sobic006G173600 Sobic006G158100 Sobic006G158100 Sobic004G178100--Sobic006G158100 Sobic001G198100 Sobic001G198100 Sobic004G178100--Sobic001G198100 Sobic003G247400 Sobic003G247400 Sobic004G178100--Sobic003G247400 Sobic004G337400 Sobic004G337400 Sobic004G178100--Sobic004G337400 Sobic001G516901 Sobic001G516901 Sobic004G178100--Sobic001G516901 Sobic003G232700 Sobic003G232700 Sobic002G000600--Sobic003G232700 Sobic002G000600--Sobic004G178100 Sobic003G141100 Sobic003G141100 Sobic002G000600--Sobic003G141100 Sobic008G062400 Sobic008G062400 Sobic002G000600--Sobic008G062400 Sobic006G197300 Sobic006G197300 Sobic002G000600--Sobic006G197300 Sobic007G023200 Sobic007G023200 Sobic002G000600--Sobic007G023200 Sobic002G000600--Sobic001G516901 Sobic004G328400 Sobic004G328400 Sobic002G000600--Sobic004G328400 Sobic001G500600 Sobic001G500600 Sobic002G000600--Sobic001G500600 Sobic002G020400--Sobic004G178100 Sobic001G043800 Sobic001G043800 Sobic002G020400--Sobic001G043800 Sobic002G020400--Sobic002G000600 Sobic002G020400--Sobic003G141100 Sobic002G020400--Sobic007G023200 Sobic003G439100 Sobic003G439100 Sobic002G020400--Sobic003G439100 Sobic002G239300 Sobic002G239300 Sobic002G020400--Sobic002G239300 Sobic002G301000 Sobic002G301000 Sobic002G020400--Sobic002G301000 Sobic003G398700 Sobic003G398700 Sobic002G020400--Sobic003G398700 Sobic009G121000 Sobic009G121000 Sobic010G043800--Sobic009G121000 Sobic007G136200 Sobic007G136200 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic006G142600 Sobic006G142600 Sobic010G043800--Sobic006G142600 Sobic010G002700 Sobic010G002700 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic001G169900 Sobic001G169900 Sobic010G043800--Sobic001G169900 Sobic001G378100 Sobic001G378100 Sobic010G043800--Sobic001G378100 Sobic007G150100 Sobic007G150100 Sobic006G173600--Sobic007G150100 Sobic003G110800 Sobic003G110800 Sobic006G173600--Sobic003G110800 Sobic008G115900 Sobic008G115900 Sobic006G173600--Sobic008G115900 Sobic003G219200 Sobic003G219200 Sobic006G173600--Sobic003G219200 Sobic006G173600--Sobic006G158100 Sobic006G173600--Sobic004G178100 Sobic006G173600--Sobic007G136200 SobicK031800 SobicK031800 Sobic006G173600--SobicK031800 Sobic001G072700 Sobic001G072700 Sobic006G173600--Sobic001G072700 Sobic006G158100--Sobic007G136200 Sobic001G017300 Sobic001G017300 Sobic006G158100--Sobic001G017300 Sobic001G258200 Sobic001G258200 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic003G247400--Sobic001G198100 Sobic003G247400--Sobic003G276300 Sobic003G247400--Sobic009G121000 Sobic003G247400--Sobic010G043800 Sobic003G247400--Sobic010G002700 Sobic003G247400--Sobic003G017100 Sobic007G185700 Sobic007G185700 Sobic003G247400--Sobic007G185700 Sobic003G247400--Sobic007G136200 Sobic001G468700 Sobic001G468700 Sobic003G247400--Sobic001G468700 Sobic004G337400--Sobic007G136200 Sobic004G337400--Sobic001G378100 Sobic006G232600 Sobic006G232600 Sobic004G337400--Sobic006G232600 Sobic004G019800 Sobic004G019800 Sobic004G337400--Sobic004G019800 Sobic003G077700 Sobic003G077700 Sobic004G337400--Sobic003G077700 Sobic004G337400--Sobic010G002700 Sobic005G106600 Sobic005G106600 Sobic004G337400--Sobic005G106600 Sobic005G084500 Sobic005G084500 Sobic004G337400--Sobic005G084500 Sobic004G337400--Sobic010G043800 Sobic001G516901--Sobic001G500600 Sobic001G516901--Sobic006G197300 Sobic004G336200 Sobic004G336200 Sobic001G516901--Sobic004G336200 Sobic002G043600 Sobic002G043600 Sobic001G516901--Sobic002G043600 Sobic009G024300 Sobic009G024300 Sobic001G516901--Sobic009G024300 Sobic010G035400 Sobic010G035400 Sobic001G516901--Sobic010G035400 Sobic004G238200 Sobic004G238200 Sobic001G516901--Sobic004G238200 Sobic002G258600 Sobic002G258600 Sobic001G516901--Sobic002G258600 Sobic003G160800 Sobic003G160800 Sobic001G516901--Sobic003G160800
Octagon: transcription factors


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