Gene annotation
Transcriptome id Sobic.004G183000.1
Synonym
Functional annotation -
UniProt A0A194YQI1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G183000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
2 Sobic.010G002700 expressed protein -
3 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
4 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
5 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
6 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
7 Sobic.001G298900 agenet domain containing protein, putative, expressed -
8 Sobic.006G158100 tRNA-dihydrouridine synthase, putative, expressed K05543: tRNA-dihydrouridine synthase 2
9 Sobic.007G058001 - K15429: TRM5, tRNA (guanine37-N1)-methyltransferase
10 Sobic.003G220100 - -
11 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
12 Sobic.004G337400 ELMO/CED-12 family protein, putative, expressed -
13 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
14 Sobic.004G178100 uncharacterized oxidoreductase yoxD, putative, expressed -
15 Sobic.004G178500 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@auxin response factor 7, putative, expressed K14486: K14486, auxin response factor
16 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.001G017300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA-binding protein containing a PIN domain, putative, expressed K06962: uncharacterized protein
19 Sobic.006G050700 disease resistance RPP13-like protein 1, putative, expressed -
20 Sobic.007G167100 expressed protein K19373: DnaJ homolog subfamily C member 28


Gene co-expression network
sample Sobic004G183000 Sobic004G183000 Sobic001G198100 Sobic001G198100 Sobic004G183000--Sobic001G198100 Sobic010G002700 Sobic010G002700 Sobic004G183000--Sobic010G002700 Sobic010G043800 Sobic010G043800 Sobic004G183000--Sobic010G043800 Sobic001G169900 Sobic001G169900 Sobic004G183000--Sobic001G169900 Sobic004G042200 Sobic004G042200 Sobic004G183000--Sobic004G042200 Sobic001G378100 Sobic001G378100 Sobic004G183000--Sobic001G378100 Sobic001G298900 Sobic001G298900 Sobic004G183000--Sobic001G298900 Sobic006G158100 Sobic006G158100 Sobic004G183000--Sobic006G158100 Sobic007G058001 Sobic007G058001 Sobic004G183000--Sobic007G058001 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic006G142600 Sobic006G142600 Sobic001G198100--Sobic006G142600 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G002700--Sobic010G043800 Sobic010G002700--Sobic001G378100 Sobic007G136200 Sobic007G136200 Sobic010G002700--Sobic007G136200 Sobic010G002700--Sobic003G276300 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic001G169900--Sobic010G002700 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic009G038900 Sobic009G038900 Sobic004G042200--Sobic009G038900 Sobic004G042200--Sobic010G002700 Sobic003G191700 Sobic003G191700 Sobic004G042200--Sobic003G191700 Sobic006G050700 Sobic006G050700 Sobic004G042200--Sobic006G050700 Sobic003G220100 Sobic003G220100 Sobic004G042200--Sobic003G220100 Sobic003G155100 Sobic003G155100 Sobic004G042200--Sobic003G155100 Sobic010G243900 Sobic010G243900 Sobic004G042200--Sobic010G243900 Sobic005G106600 Sobic005G106600 Sobic004G042200--Sobic005G106600 Sobic006G133900 Sobic006G133900 Sobic004G042200--Sobic006G133900 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G217900 Sobic001G217900 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G540600 Sobic001G540600 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G258200 Sobic001G258200 Sobic001G378100--Sobic001G258200 Sobic001G230000 Sobic001G230000 Sobic001G298900--Sobic001G230000 Sobic006G219600 Sobic006G219600 Sobic001G298900--Sobic006G219600 Sobic002G198200 Sobic002G198200 Sobic001G298900--Sobic002G198200 Sobic004G178500 Sobic004G178500 Sobic001G298900--Sobic004G178500 Sobic001G298900--Sobic003G155100 Sobic008G044100 Sobic008G044100 Sobic001G298900--Sobic008G044100 Sobic003G388100 Sobic003G388100 Sobic001G298900--Sobic003G388100 Sobic005G142800 Sobic005G142800 Sobic001G298900--Sobic005G142800 Sobic004G146600 Sobic004G146600 Sobic001G298900--Sobic004G146600 Sobic006G158100--Sobic007G136200 Sobic006G158100--Sobic001G017300 Sobic006G158100--Sobic001G258200 Sobic006G158100--Sobic001G504400 Sobic003G094100 Sobic003G094100 Sobic006G158100--Sobic003G094100 Sobic006G158100--Sobic010G043800 Sobic010G067100 Sobic010G067100 Sobic006G158100--Sobic010G067100 Sobic006G158100--Sobic001G169900 Sobic003G185900 Sobic003G185900 Sobic006G158100--Sobic003G185900 Sobic007G058001--Sobic010G043800 Sobic002G005600 Sobic002G005600 Sobic007G058001--Sobic002G005600 Sobic007G058001--Sobic001G504400 Sobic003G345500 Sobic003G345500 Sobic007G058001--Sobic003G345500 Sobic007G058001--Sobic006G232600 Sobic007G135800 Sobic007G135800 Sobic007G058001--Sobic007G135800 Sobic007G058001--Sobic001G217900 Sobic003G003450 Sobic003G003450 Sobic007G058001--Sobic003G003450 Sobic009G207900 Sobic009G207900 Sobic007G058001--Sobic009G207900
Octagon: transcription factors


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