Gene annotation
Transcriptome id Sobic.001G198100.1,Sobic.001G198100.2
Synonym Sb01g017450
Functional annotation PAP fibrillin family domain containing protein, expressed
UniProt A0A1Z5S6U6 , C5WWA4
Pfam PF04755
Panther DB PTHR31906 PTHR31906:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46910 : Plastid-lipid associated protein PAP / fibrillin family protein
RAP-DB (Rice) LOC_Os09g04790.1 : PAP fibrillin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a017450
Brachypodium PNT67701 , KQJ97436 , KQJ97435 , KQJ97434 , KQJ97433
Barley -
Wheat TraesCS1D02G177800 , TraesCS1B02G201000 , TraesCS1B02G201000 , TraesCS1A02G179500
Populus -


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cDNA sequences
Sobic.001G198100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
2 Sobic.003G247400 OsCttP1 - Putative C-terminal processing peptidase homologue, expressed -
3 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
4 Sobic.010G002700 expressed protein -
5 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
6 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
7 Sobic.009G121000 expressed protein -
8 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
9 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
10 Sobic.007G185700 CRS2-associated factor 1, chloroplast precursor, putative, expressed -
11 Sobic.008G167700 expressed protein -
12 Sobic.003G057233 - -
13 Sobic.004G183000 - -
14 Sobic.003G011900 expressed protein -
15 Sobic.003G217700 - -
16 Sobic.001G468700 expressed protein -
17 Sobic.004G042200 OsFBO8 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
18 Sobic.007G136200 expressed protein -
19 Sobic.006G232600 amine oxidase, flavin-containing, domain containing protein, expressed K02293: PDS, 15-cis-phytoene desaturase
20 Sobic.001G054000 WD domain, G-beta repeat domain containing protein, expressed K14003: PREB, prolactin regulatory element-binding protein


Gene co-expression network
sample Sobic001G198100 Sobic001G198100 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G169900 Sobic001G169900 Sobic001G198100--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G198100--Sobic010G002700 Sobic002G006600 Sobic002G006600 Sobic001G198100--Sobic002G006600 Sobic010G043800 Sobic010G043800 Sobic001G198100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic006G142600 Sobic006G142600 Sobic001G198100--Sobic006G142600 Sobic003G017100--Sobic002G006600 Sobic003G017100--Sobic010G002700 Sobic003G017100--Sobic001G198100 Sobic003G017100--Sobic003G276300 Sobic003G017100--Sobic001G169900 Sobic003G313300 Sobic003G313300 Sobic003G017100--Sobic003G313300 Sobic001G468700 Sobic001G468700 Sobic003G017100--Sobic001G468700 Sobic003G017100--Sobic003G247400 Sobic003G191700 Sobic003G191700 Sobic003G017100--Sobic003G191700 Sobic003G247400--Sobic001G198100 Sobic003G247400--Sobic003G276300 Sobic003G247400--Sobic009G121000 Sobic003G247400--Sobic010G043800 Sobic003G247400--Sobic010G002700 Sobic003G247400--Sobic003G017100 Sobic007G185700 Sobic007G185700 Sobic003G247400--Sobic007G185700 Sobic007G136200 Sobic007G136200 Sobic003G247400--Sobic007G136200 Sobic003G247400--Sobic001G468700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G394800 Sobic001G394800 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic010G002700--Sobic001G169900 Sobic005G118400 Sobic005G118400 Sobic010G002700--Sobic005G118400 Sobic010G002700--Sobic010G043800 Sobic001G378100 Sobic001G378100 Sobic010G002700--Sobic001G378100 Sobic010G002700--Sobic007G136200 Sobic010G002700--Sobic003G276300 Sobic010G002700--Sobic001G198100 Sobic001G530900 Sobic001G530900 Sobic010G002700--Sobic001G530900 Sobic002G006600--Sobic003G017100 Sobic002G006600--Sobic001G198100 Sobic002G006600--Sobic010G002700 Sobic002G006600--Sobic001G169900 Sobic003G429650 Sobic003G429650 Sobic002G006600--Sobic003G429650 Sobic004G164400 Sobic004G164400 Sobic002G006600--Sobic004G164400 Sobic006G182900 Sobic006G182900 Sobic002G006600--Sobic006G182900 Sobic009G209300 Sobic009G209300 Sobic002G006600--Sobic009G209300 Sobic006G105400 Sobic006G105400 Sobic002G006600--Sobic006G105400 Sobic010G043800--Sobic009G121000 Sobic010G043800--Sobic007G136200 Sobic001G504400 Sobic001G504400 Sobic010G043800--Sobic001G504400 Sobic010G043800--Sobic006G142600 Sobic010G043800--Sobic010G002700 Sobic010G043800--Sobic006G158100 Sobic007G103400 Sobic007G103400 Sobic010G043800--Sobic007G103400 Sobic010G043800--Sobic001G169900 Sobic010G043800--Sobic001G378100 Sobic009G121000--Sobic010G043800 Sobic005G063000 Sobic005G063000 Sobic009G121000--Sobic005G063000 Sobic009G121000--Sobic003G247400 Sobic009G121000--Sobic001G198100 Sobic009G121000--Sobic006G142600 Sobic003G160800 Sobic003G160800 Sobic009G121000--Sobic003G160800 Sobic009G121000--Sobic003G276300 Sobic009G121000--Sobic007G103400 Sobic009G121000--Sobic010G002700 Sobic003G276300--Sobic010G002700 Sobic003G276300--Sobic001G017300 Sobic003G276300--Sobic003G017100 Sobic003G276300--Sobic003G247400 Sobic003G276300--Sobic006G142600 Sobic003G276300--Sobic001G169900 Sobic003G276300--Sobic010G043800 Sobic003G276300--Sobic001G198100 Sobic003G276300--Sobic007G136200 Sobic006G142600--Sobic010G043800 Sobic003G306200 Sobic003G306200 Sobic006G142600--Sobic003G306200 Sobic006G142600--Sobic007G103400 Sobic007G108900 Sobic007G108900 Sobic006G142600--Sobic007G108900 Sobic006G142600--Sobic007G136200 Sobic006G142600--Sobic001G169900 Sobic006G142600--Sobic006G158100 Sobic002G198300 Sobic002G198300 Sobic006G142600--Sobic002G198300 Sobic003G094100 Sobic003G094100 Sobic006G142600--Sobic003G094100
Octagon: transcription factors


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