Gene annotation
Transcriptome id Sobic.003G011900.1,Sobic.003G011900.2
Synonym Sb03g001210
Functional annotation expressed protein
UniProt C5XKB0 , A0A1B6Q0R9
Pfam PF04278
Panther DB PTHR35138
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62650 : Tic22-like family protein
RAP-DB (Rice) LOC_Os01g12550.1 : expressed protein
MaizeGDB (Corn) Zm00025a022848
Brachypodium -
Barley -
Wheat TraesCS3D02G158400 , TraesCS3B02G177500 , TraesCS3B02G177500 , TraesCS3A02G150500
Populus -


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cDNA sequences
Sobic.003G011900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G060100 CK1_CaseinKinase_1a.4 - CK1 includes the casein kinase 1 kinases, expressed -
2 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
3 Sobic.010G255700 plant-specific domain TIGR01589 family protein, putative, expressed -
4 Sobic.003G057233 - -
5 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
6 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
7 Sobic.004G258700 PHD-finger family protein, expressed -
8 Sobic.006G079400 - -
9 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
10 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
11 Sobic.002G228700 patatin, putative, expressed -
12 Sobic.009G191100 expressed protein -
13 Sobic.003G276300 zinc knuckle domain containing protein, expressed -
14 Sobic.006G105400 expressed protein -
15 Sobic.004G164400 expressed protein -
16 Sobic.008G167700 expressed protein -
17 Sobic.001G046200 - -
18 Sobic.001G395500 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
19 Sobic.002G408200 sec8 exocyst complex component specific domain containing protein, expressed K06111: EXOC4, exocyst complex component 4
20 Sobic.002G031600 cadmium-induced protein, putative, expressed -


Gene co-expression network
sample Sobic003G011900 Sobic003G011900 Sobic001G060100 Sobic001G060100 Sobic003G011900--Sobic001G060100 Sobic001G198100 Sobic001G198100 Sobic003G011900--Sobic001G198100 Sobic010G255700 Sobic010G255700 Sobic003G011900--Sobic010G255700 Sobic003G057233 Sobic003G057233 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic001G169900 Sobic001G169900 Sobic003G011900--Sobic001G169900 Sobic004G258700 Sobic004G258700 Sobic003G011900--Sobic004G258700 Sobic006G079400 Sobic006G079400 Sobic003G011900--Sobic006G079400 Sobic002G006600 Sobic002G006600 Sobic003G011900--Sobic002G006600 Sobic001G060100--Sobic003G011900 Sobic001G060100--Sobic001G198100 Sobic001G060100--Sobic003G057233 Sobic001G054000 Sobic001G054000 Sobic001G060100--Sobic001G054000 Sobic001G060100--Sobic001G169900 Sobic010G043800 Sobic010G043800 Sobic001G060100--Sobic010G043800 Sobic009G121000 Sobic009G121000 Sobic001G060100--Sobic009G121000 Sobic006G142600 Sobic006G142600 Sobic001G060100--Sobic006G142600 Sobic001G528800 Sobic001G528800 Sobic001G060100--Sobic001G528800 Sobic003G017100 Sobic003G017100 Sobic001G198100--Sobic003G017100 Sobic003G247400 Sobic003G247400 Sobic001G198100--Sobic003G247400 Sobic001G198100--Sobic001G169900 Sobic010G002700 Sobic010G002700 Sobic001G198100--Sobic010G002700 Sobic001G198100--Sobic002G006600 Sobic001G198100--Sobic010G043800 Sobic001G198100--Sobic009G121000 Sobic003G276300 Sobic003G276300 Sobic001G198100--Sobic003G276300 Sobic001G198100--Sobic006G142600 Sobic006G105400 Sobic006G105400 Sobic010G255700--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic010G255700--Sobic001G318432 Sobic006G048600 Sobic006G048600 Sobic010G255700--Sobic006G048600 Sobic009G228100 Sobic009G228100 Sobic010G255700--Sobic009G228100 Sobic006G274600 Sobic006G274600 Sobic010G255700--Sobic006G274600 Sobic010G255700--Sobic004G258700 Sobic006G048500 Sobic006G048500 Sobic010G255700--Sobic006G048500 Sobic005G144400 Sobic005G144400 Sobic010G255700--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic010G255700--Sobic003G148000 Sobic001G394800 Sobic001G394800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G057233--Sobic003G017100 Sobic003G057233--Sobic004G258700 Sobic010G248700 Sobic010G248700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic001G046200 Sobic001G046200 Sobic010G243900--Sobic001G046200 Sobic004G042200 Sobic004G042200 Sobic010G243900--Sobic004G042200 Sobic010G149200 Sobic010G149200 Sobic010G243900--Sobic010G149200 Sobic001G161800 Sobic001G161800 Sobic010G243900--Sobic001G161800 Sobic003G398700 Sobic003G398700 Sobic010G243900--Sobic003G398700 Sobic008G113100 Sobic008G113100 Sobic010G243900--Sobic008G113100 Sobic010G021500 Sobic010G021500 Sobic010G243900--Sobic010G021500 Sobic002G029900 Sobic002G029900 Sobic010G243900--Sobic002G029900 Sobic002G042800 Sobic002G042800 Sobic010G243900--Sobic002G042800 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G169900--Sobic001G198100 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic001G169900--Sobic003G017100 Sobic004G258700--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G258700--Sobic008G028700 Sobic001G456900 Sobic001G456900 Sobic004G258700--Sobic001G456900 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic010G277500 Sobic010G277500 Sobic004G258700--Sobic010G277500 Sobic007G065400 Sobic007G065400 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic009G040600 Sobic009G040600 Sobic004G258700--Sobic009G040600 Sobic002G145101 Sobic002G145101 Sobic006G079400--Sobic002G145101 Sobic006G079400--Sobic003G148000 Sobic003G429650 Sobic003G429650 Sobic006G079400--Sobic003G429650 Sobic007G113800 Sobic007G113800 Sobic006G079400--Sobic007G113800 Sobic006G079400--Sobic004G258700 Sobic002G243900 Sobic002G243900 Sobic006G079400--Sobic002G243900 Sobic006G079400--Sobic006G048500 Sobic006G079400--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic006G079400--Sobic002G180666 Sobic002G006600--Sobic003G017100 Sobic002G006600--Sobic001G198100 Sobic002G006600--Sobic010G002700 Sobic002G006600--Sobic001G169900 Sobic002G006600--Sobic003G429650 Sobic004G164400 Sobic004G164400 Sobic002G006600--Sobic004G164400 Sobic006G182900 Sobic006G182900 Sobic002G006600--Sobic006G182900 Sobic009G209300 Sobic009G209300 Sobic002G006600--Sobic009G209300 Sobic002G006600--Sobic006G105400
Octagon: transcription factors


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