Gene annotation
Transcriptome id Sobic.002G228700.1
Synonym PLP2, PLA2A, PLAIIA, Sb02g026818
Functional annotation patatin, putative, expressed
UniProt A0A1B6QCY8
Pfam PF01734
Panther DB PTHR32176 PTHR32176:SF12
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G26560 : phospholipase A 2A
RAP-DB (Rice) LOC_Os09g28770.1 : patatin, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQJ90542
Barley HORVU5Hr1G069130.2 , HORVU5Hr1G069130.3 , HORVU5Hr1G069130.1 , HORVU5Hr1G069130.6 , HORVU5Hr1G069130.7 , HORVU5Hr1G069130.4 , HORVU5Hr1G069130.5 , HORVU5Hr1G069130.8 , HORVU5Hr1G069130.9 , HORVU5Hr1G069130.19 , HORVU4Hr1G050060.13 , HORVU4Hr1G050060.12 , HORVU5Hr1G069130.18 , HORVU4Hr1G050060.15 , HORVU4Hr1G050060.17 , HORVU4Hr1G050060.16 , HORVU4Hr1G050060.18 , HORVU4Hr1G019140.8 , HORVU5Hr1G069130.12 , HORVU5Hr1G069130.13 , HORVU5Hr1G069130.14 , HORVU5Hr1G069130.15 , HORVU5Hr1G069130.17 , HORVU4Hr1G050060.11 , HORVU4Hr1G050060.10 , HORVU4Hr1G019140.7 , HORVU5Hr1G069130.25 , HORVU5Hr1G069130.21 , HORVU5Hr1G069130.20 , HORVU5Hr1G069130.23 , HORVU5Hr1G069130.22 , HORVU4Hr1G050060.9 , HORVU4Hr1G050060.8 , HORVU4Hr1G050060.5 , HORVU4Hr1G050060.4 , HORVU4Hr1G050060.7 , HORVU4Hr1G050060.6 , HORVU4Hr1G050060.1 , HORVU4Hr1G050060.3 , HORVU4Hr1G050060.2 , HORVU4Hr1G019140.22 , HORVU4Hr1G019140.24 , HORVU4Hr1G019140.25 , HORVU5Hr1G069130.11 , HORVU4Hr1G019140.12 , HORVU4Hr1G050060.14 , HORVU3Hr1G101170.1 , HORVU3Hr1G101170.2 , HORVU5Hr1G069130.16
Wheat TraesCS5A02G243200 , TraesCS5D02G249800 , TraesCS5D02G249800 , TraesCS5B02G241100 , TraesCS5B02G241100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G258700 PHD-finger family protein, expressed -
2 Sobic.007G113800 early-responsive to dehydration protein-related, putative, expressed -
3 Sobic.006G079400 - -
4 Sobic.009G191100 expressed protein -
5 Sobic.007G225800 NOL1/NOP2/sun family protein, putative, expressed K15335: NSUN2, tRNA (cytosine34-C5)-methyltransferase
6 Sobic.002G380500 Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12891: splicing factor, arginine/serine-rich 2
7 Sobic.003G011900 expressed protein -
8 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
9 Sobic.003G429650 - -
10 Sobic.005G110472 - -
11 Sobic.003G170100 - -
12 Sobic.004G299000 expressed protein -
13 Sobic.010G202000 glycerophosphoryl diester phosphodiesterase family protein, putative, expressed -
14 Sobic.006G246900 expressed protein -
15 Sobic.010G277500 expressed protein -
16 Sobic.010G255700 plant-specific domain TIGR01589 family protein, putative, expressed -
17 Sobic.003G383300 RNA polymerase III RPC4 domain containing protein, expressed K03026: RPC4, DNA-directed RNA polymerase III subunit RPC4
18 Sobic.005G144400 - -
19 Sobic.008G047700 serine esterase family protein, putative, expressed -
20 Sobic.008G092532 - -


Gene co-expression network
sample Sobic002G228700 Sobic002G228700 Sobic004G258700 Sobic004G258700 Sobic002G228700--Sobic004G258700 Sobic007G113800 Sobic007G113800 Sobic002G228700--Sobic007G113800 Sobic006G079400 Sobic006G079400 Sobic002G228700--Sobic006G079400 Sobic009G191100 Sobic009G191100 Sobic002G228700--Sobic009G191100 Sobic007G225800 Sobic007G225800 Sobic002G228700--Sobic007G225800 Sobic002G380500 Sobic002G380500 Sobic002G228700--Sobic002G380500 Sobic003G011900 Sobic003G011900 Sobic002G228700--Sobic003G011900 Sobic003G148000 Sobic003G148000 Sobic002G228700--Sobic003G148000 Sobic003G429650 Sobic003G429650 Sobic002G228700--Sobic003G429650 Sobic008G113100 Sobic008G113100 Sobic004G258700--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G258700--Sobic008G028700 Sobic001G456900 Sobic001G456900 Sobic004G258700--Sobic001G456900 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic010G277500 Sobic010G277500 Sobic004G258700--Sobic010G277500 Sobic007G065400 Sobic007G065400 Sobic004G258700--Sobic007G065400 Sobic007G161000 Sobic007G161000 Sobic004G258700--Sobic007G161000 Sobic009G040600 Sobic009G040600 Sobic004G258700--Sobic009G040600 Sobic007G113800--Sobic003G148000 Sobic007G113800--Sobic006G079400 Sobic005G110472 Sobic005G110472 Sobic007G113800--Sobic005G110472 Sobic010G202000 Sobic010G202000 Sobic007G113800--Sobic010G202000 Sobic005G144400 Sobic005G144400 Sobic007G113800--Sobic005G144400 Sobic001G067850 Sobic001G067850 Sobic007G113800--Sobic001G067850 Sobic002G243900 Sobic002G243900 Sobic007G113800--Sobic002G243900 Sobic006G048500 Sobic006G048500 Sobic007G113800--Sobic006G048500 Sobic003G179201 Sobic003G179201 Sobic007G113800--Sobic003G179201 Sobic002G145101 Sobic002G145101 Sobic006G079400--Sobic002G145101 Sobic006G079400--Sobic003G148000 Sobic006G079400--Sobic003G429650 Sobic006G079400--Sobic007G113800 Sobic006G079400--Sobic004G258700 Sobic006G079400--Sobic002G243900 Sobic006G079400--Sobic006G048500 Sobic006G079400--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic006G079400--Sobic002G180666 Sobic002G358500 Sobic002G358500 Sobic009G191100--Sobic002G358500 Sobic002G121600 Sobic002G121600 Sobic009G191100--Sobic002G121600 Sobic009G191100--Sobic007G113800 Sobic004G182900 Sobic004G182900 Sobic009G191100--Sobic004G182900 Sobic004G299000 Sobic004G299000 Sobic009G191100--Sobic004G299000 Sobic002G031600 Sobic002G031600 Sobic009G191100--Sobic002G031600 Sobic007G173200 Sobic007G173200 Sobic009G191100--Sobic007G173200 Sobic009G191100--Sobic002G228700 Sobic009G191100--Sobic004G258700 Sobic008G092532 Sobic008G092532 Sobic007G225800--Sobic008G092532 Sobic003G390400 Sobic003G390400 Sobic007G225800--Sobic003G390400 Sobic002G346600 Sobic002G346600 Sobic007G225800--Sobic002G346600 Sobic006G063001 Sobic006G063001 Sobic007G225800--Sobic006G063001 Sobic005G063700 Sobic005G063700 Sobic007G225800--Sobic005G063700 Sobic007G225800--Sobic002G228700 Sobic002G402600 Sobic002G402600 Sobic007G225800--Sobic002G402600 Sobic007G225800--Sobic009G191100 Sobic003G163100 Sobic003G163100 Sobic007G225800--Sobic003G163100 Sobic008G173900 Sobic008G173900 Sobic002G380500--Sobic008G173900 Sobic003G170100 Sobic003G170100 Sobic002G380500--Sobic003G170100 Sobic001G420200 Sobic001G420200 Sobic002G380500--Sobic001G420200 Sobic002G144933 Sobic002G144933 Sobic002G380500--Sobic002G144933 Sobic002G157000 Sobic002G157000 Sobic002G380500--Sobic002G157000 Sobic003G200200 Sobic003G200200 Sobic002G380500--Sobic003G200200 Sobic003G108700 Sobic003G108700 Sobic002G380500--Sobic003G108700 Sobic003G268300 Sobic003G268300 Sobic002G380500--Sobic003G268300 Sobic002G380500--Sobic005G110472 Sobic001G060100 Sobic001G060100 Sobic003G011900--Sobic001G060100 Sobic001G198100 Sobic001G198100 Sobic003G011900--Sobic001G198100 Sobic010G255700 Sobic010G255700 Sobic003G011900--Sobic010G255700 Sobic003G057233 Sobic003G057233 Sobic003G011900--Sobic003G057233 Sobic010G243900 Sobic010G243900 Sobic003G011900--Sobic010G243900 Sobic001G169900 Sobic001G169900 Sobic003G011900--Sobic001G169900 Sobic003G011900--Sobic004G258700 Sobic003G011900--Sobic006G079400 Sobic002G006600 Sobic002G006600 Sobic003G011900--Sobic002G006600 Sobic003G148000--Sobic005G144400 Sobic003G148000--Sobic002G180666 Sobic003G148000--Sobic002G145101 Sobic003G148000--Sobic006G048500 Sobic003G148000--Sobic002G243900 Sobic001G214300 Sobic001G214300 Sobic003G148000--Sobic001G214300 Sobic007G096600 Sobic007G096600 Sobic003G148000--Sobic007G096600 Sobic003G148000--Sobic003G429650 Sobic003G148000--Sobic004G258700 Sobic003G429650--Sobic006G048500 Sobic006G182900 Sobic006G182900 Sobic003G429650--Sobic006G182900 Sobic003G429650--Sobic003G148000 Sobic003G429650--Sobic005G144400 Sobic003G429650--Sobic003G179201 Sobic001G287201 Sobic001G287201 Sobic003G429650--Sobic001G287201 Sobic003G429650--Sobic002G243900 Sobic003G429650--Sobic001G214300 Sobic002G006900 Sobic002G006900 Sobic003G429650--Sobic002G006900
Octagon: transcription factors


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