Gene annotation
Transcriptome id Sobic.010G255700.1
Synonym Sb10g029305
Functional annotation plant-specific domain TIGR01589 family protein, putative, expressed
UniProt C5Z9A3
Pfam PF09713
Panther DB PTHR31871 PTHR31871:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G10250 : Plant protein 1589 of unknown function
RAP-DB (Rice) LOC_Os06g49180.1 : plant-specific domain TIGR01589 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a041766 , Zm00025a018412
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.010G255700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G105400 expressed protein -
2 Sobic.001G318432 - -
3 Sobic.006G048600 - -
4 Sobic.009G228100 -(PubMedID : 23915383)@ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
5 Sobic.006G274600 exo70 exocyst complex subunit, putative, expressed K07195: EXOC7, exocyst complex component 7
6 Sobic.004G258700 PHD-finger family protein, expressed -
7 Sobic.006G048500 - -
8 Sobic.005G144400 - -
9 Sobic.003G148000 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
10 Sobic.003G429650 - -
11 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
12 Sobic.003G011900 expressed protein -
13 Sobic.007G161000 RecF/RecN/SMC N terminal domain containing protein, expressed K06636: structural maintenance of chromosome 1
14 Sobic.006G182900 expressed protein -
15 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
16 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
17 Sobic.004G164400 expressed protein -
18 Sobic.001G214300 expressed protein -
19 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
20 Sobic.002G252800 OsFBX332 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic010G255700 Sobic010G255700 Sobic006G105400 Sobic006G105400 Sobic010G255700--Sobic006G105400 Sobic001G318432 Sobic001G318432 Sobic010G255700--Sobic001G318432 Sobic006G048600 Sobic006G048600 Sobic010G255700--Sobic006G048600 Sobic009G228100 Sobic009G228100 Sobic010G255700--Sobic009G228100 Sobic006G274600 Sobic006G274600 Sobic010G255700--Sobic006G274600 Sobic004G258700 Sobic004G258700 Sobic010G255700--Sobic004G258700 Sobic006G048500 Sobic006G048500 Sobic010G255700--Sobic006G048500 Sobic005G144400 Sobic005G144400 Sobic010G255700--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic010G255700--Sobic003G148000 Sobic001G214300 Sobic001G214300 Sobic006G105400--Sobic001G214300 Sobic006G105400--Sobic006G048600 Sobic006G105400--Sobic006G048500 Sobic006G182900 Sobic006G182900 Sobic006G105400--Sobic006G182900 Sobic004G007100 Sobic004G007100 Sobic006G105400--Sobic004G007100 Sobic007G161000 Sobic007G161000 Sobic006G105400--Sobic007G161000 Sobic001G365900 Sobic001G365900 Sobic006G105400--Sobic001G365900 Sobic006G105400--Sobic010G255700 Sobic004G341900 Sobic004G341900 Sobic006G105400--Sobic004G341900 Sobic001G318432--Sobic001G214300 Sobic001G318432--Sobic006G048600 Sobic003G029700 Sobic003G029700 Sobic001G318432--Sobic003G029700 Sobic006G228500 Sobic006G228500 Sobic001G318432--Sobic006G228500 Sobic001G318432--Sobic004G341900 Sobic001G318432--Sobic006G048500 Sobic003G429650 Sobic003G429650 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic001G318432--Sobic006G182900 Sobic006G048600--Sobic004G007100 Sobic006G048600--Sobic006G048500 Sobic006G048600--Sobic001G318432 Sobic006G048600--Sobic006G105400 Sobic006G048600--Sobic004G341900 Sobic001G205200 Sobic001G205200 Sobic006G048600--Sobic001G205200 Sobic006G048600--Sobic005G144400 Sobic006G048600--Sobic003G148000 Sobic006G048600--Sobic001G214300 Sobic009G228100--Sobic010G255700 Sobic002G138100 Sobic002G138100 Sobic009G228100--Sobic002G138100 Sobic001G169900 Sobic001G169900 Sobic009G228100--Sobic001G169900 Sobic003G057233 Sobic003G057233 Sobic009G228100--Sobic003G057233 Sobic003G029500 Sobic003G029500 Sobic009G228100--Sobic003G029500 Sobic001G394800 Sobic001G394800 Sobic009G228100--Sobic001G394800 Sobic010G248700 Sobic010G248700 Sobic009G228100--Sobic010G248700 Sobic009G228100--Sobic001G318432 Sobic002G006600 Sobic002G006600 Sobic009G228100--Sobic002G006600 Sobic008G067600 Sobic008G067600 Sobic006G274600--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic006G274600--Sobic009G065100 Sobic004G164400 Sobic004G164400 Sobic006G274600--Sobic004G164400 Sobic006G274600--Sobic010G255700 Sobic004G039200 Sobic004G039200 Sobic006G274600--Sobic004G039200 Sobic004G084300 Sobic004G084300 Sobic006G274600--Sobic004G084300 Sobic006G274600--Sobic007G161000 Sobic006G274600--Sobic006G105400 Sobic002G320500 Sobic002G320500 Sobic006G274600--Sobic002G320500 Sobic008G113100 Sobic008G113100 Sobic004G258700--Sobic008G113100 Sobic008G028700 Sobic008G028700 Sobic004G258700--Sobic008G028700 Sobic001G456900 Sobic001G456900 Sobic004G258700--Sobic001G456900 Sobic004G258700--Sobic003G148000 Sobic003G101500 Sobic003G101500 Sobic004G258700--Sobic003G101500 Sobic010G277500 Sobic010G277500 Sobic004G258700--Sobic010G277500 Sobic007G065400 Sobic007G065400 Sobic004G258700--Sobic007G065400 Sobic004G258700--Sobic007G161000 Sobic009G040600 Sobic009G040600 Sobic004G258700--Sobic009G040600 Sobic006G048500--Sobic004G007100 Sobic006G048500--Sobic005G144400 Sobic002G145101 Sobic002G145101 Sobic006G048500--Sobic002G145101 Sobic006G048500--Sobic003G148000 Sobic006G048500--Sobic003G429650 Sobic002G243900 Sobic002G243900 Sobic006G048500--Sobic002G243900 Sobic006G048500--Sobic006G048600 Sobic006G048500--Sobic002G006900 Sobic006G048500--Sobic006G182900 Sobic005G144400--Sobic006G048500 Sobic005G144400--Sobic003G148000 Sobic005G144400--Sobic002G243900 Sobic007G096600 Sobic007G096600 Sobic005G144400--Sobic007G096600 Sobic005G144400--Sobic004G007100 Sobic005G144400--Sobic001G214300 Sobic003G176500 Sobic003G176500 Sobic005G144400--Sobic003G176500 Sobic005G144400--Sobic003G429650 Sobic007G178700 Sobic007G178700 Sobic005G144400--Sobic007G178700 Sobic003G148000--Sobic005G144400 Sobic002G180666 Sobic002G180666 Sobic003G148000--Sobic002G180666 Sobic003G148000--Sobic002G145101 Sobic003G148000--Sobic006G048500 Sobic003G148000--Sobic002G243900 Sobic003G148000--Sobic001G214300 Sobic003G148000--Sobic007G096600 Sobic003G148000--Sobic003G429650 Sobic003G148000--Sobic004G258700
Octagon: transcription factors


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