Gene annotation
Transcriptome id Sobic.009G228100.1
Synonym ATUBC24, UBC24 (PHO2), PHO2, UBC24, Sb09g028110
Functional annotation - (PubMedID : 23915383)
ubiquitin conjugating enzyme protein, putative, expressed
UniProt C5YVG1
Pfam PF00179
Panther DB PTHR24067 PTHR24067:SF97
NCBI CDD KOG0895; Ubiquitin-conjugating enzyme
KEGG Orthology K10581; ubiquitin-conjugating enzyme E2 O
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33770 : phosphate 2
RAP-DB (Rice) LOC_Os05g48390.1 : ubiquitin conjugating enzyme protein, putative, expressed
MaizeGDB (Corn) Zm00025a044522 , Zm00025a022481 , Zm00025a042323
Brachypodium KQK04946 , KQK04947
Barley HORVU1Hr1G085570.5 , HORVU1Hr1G085570.4 , HORVU1Hr1G085570.1 , HORVU1Hr1G085570.2 , HORVU1Hr1G085570.6
Wheat TraesCS1D02G396300 , TraesCS1D02G396300 , TraesCS1D02G396300 , TraesCS1B02G415800 , TraesCS1A02G388400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G255700 plant-specific domain TIGR01589 family protein, putative, expressed -
2 Sobic.002G138100 ACT domain containing protein, expressed -
3 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
4 Sobic.003G057233 - -
5 Sobic.003G029500 zinc finger, C3HC4 type family protein, expressed -
6 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
7 Sobic.010G248700 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.001G318432 - -
9 Sobic.002G006600 -(PubMedID : 26976818)@aminotransferase, classes I and II, domain containing protein, expressed K14272: glutamate--glyoxylate aminotransferase
10 Sobic.002G104100 FYVE zinc finger domain containing protein, expressed -
11 Sobic.003G011900 expressed protein -
12 Sobic.006G133900 NIN, putative, expressed -
13 Sobic.004G181600 calmodulin binding protein, putative, expressed -
14 Sobic.002G173000 disease resistance protein RGA2, putative, expressed -
15 Sobic.006G105400 expressed protein -
16 Sobic.003G171200 caffeine-induced death protein 1, putative, expressed -
17 Sobic.006G219150 - -
18 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
19 Sobic.001G198100 PAP fibrillin family domain containing protein, expressed -
20 Sobic.001G100100 tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@GATA transcription factor 25, putative, expressed -


Gene co-expression network
sample Sobic009G228100 Sobic009G228100 Sobic010G255700 Sobic010G255700 Sobic009G228100--Sobic010G255700 Sobic002G138100 Sobic002G138100 Sobic009G228100--Sobic002G138100 Sobic001G169900 Sobic001G169900 Sobic009G228100--Sobic001G169900 Sobic003G057233 Sobic003G057233 Sobic009G228100--Sobic003G057233 Sobic003G029500 Sobic003G029500 Sobic009G228100--Sobic003G029500 Sobic001G394800 Sobic001G394800 Sobic009G228100--Sobic001G394800 Sobic010G248700 Sobic010G248700 Sobic009G228100--Sobic010G248700 Sobic001G318432 Sobic001G318432 Sobic009G228100--Sobic001G318432 Sobic002G006600 Sobic002G006600 Sobic009G228100--Sobic002G006600 Sobic006G105400 Sobic006G105400 Sobic010G255700--Sobic006G105400 Sobic010G255700--Sobic001G318432 Sobic006G048600 Sobic006G048600 Sobic010G255700--Sobic006G048600 Sobic010G255700--Sobic009G228100 Sobic006G274600 Sobic006G274600 Sobic010G255700--Sobic006G274600 Sobic004G258700 Sobic004G258700 Sobic010G255700--Sobic004G258700 Sobic006G048500 Sobic006G048500 Sobic010G255700--Sobic006G048500 Sobic005G144400 Sobic005G144400 Sobic010G255700--Sobic005G144400 Sobic003G148000 Sobic003G148000 Sobic010G255700--Sobic003G148000 Sobic002G138100--Sobic001G394800 Sobic007G010800 Sobic007G010800 Sobic002G138100--Sobic007G010800 Sobic009G040400 Sobic009G040400 Sobic002G138100--Sobic009G040400 Sobic002G138100--Sobic009G228100 Sobic002G138100--Sobic001G169900 Sobic003G103300 Sobic003G103300 Sobic002G138100--Sobic003G103300 Sobic003G003450 Sobic003G003450 Sobic002G138100--Sobic003G003450 Sobic002G138100--Sobic003G057233 Sobic002G356900 Sobic002G356900 Sobic002G138100--Sobic002G356900 Sobic010G002700 Sobic010G002700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G057233--Sobic003G017100 Sobic003G057233--Sobic004G258700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic005G201000 Sobic005G201000 Sobic003G029500--Sobic005G201000 Sobic005G132000 Sobic005G132000 Sobic003G029500--Sobic005G132000 Sobic006G051800 Sobic006G051800 Sobic003G029500--Sobic006G051800 Sobic003G029500--Sobic009G040400 Sobic003G029500--Sobic003G003450 Sobic004G312600 Sobic004G312600 Sobic003G029500--Sobic004G312600 Sobic010G092350 Sobic010G092350 Sobic003G029500--Sobic010G092350 Sobic005G106600 Sobic005G106600 Sobic003G029500--Sobic005G106600 Sobic003G220100 Sobic003G220100 Sobic003G029500--Sobic003G220100 Sobic001G394800--Sobic002G138100 Sobic001G394800--Sobic001G169900 Sobic001G394800--Sobic003G003450 Sobic001G394800--Sobic003G057233 Sobic001G394800--Sobic007G010800 Sobic001G283100 Sobic001G283100 Sobic001G394800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic001G394800--Sobic004G035900 Sobic001G054000 Sobic001G054000 Sobic001G394800--Sobic001G054000 Sobic007G227100 Sobic007G227100 Sobic001G394800--Sobic007G227100 Sobic001G214300 Sobic001G214300 Sobic010G248700--Sobic001G214300 Sobic008G130100 Sobic008G130100 Sobic010G248700--Sobic008G130100 Sobic002G173000 Sobic002G173000 Sobic010G248700--Sobic002G173000 Sobic010G256700 Sobic010G256700 Sobic010G248700--Sobic010G256700 Sobic004G341900 Sobic004G341900 Sobic010G248700--Sobic004G341900 Sobic001G365900 Sobic001G365900 Sobic010G248700--Sobic001G365900 Sobic002G104100 Sobic002G104100 Sobic010G248700--Sobic002G104100 Sobic010G248700--Sobic003G148000 Sobic001G454500 Sobic001G454500 Sobic010G248700--Sobic001G454500 Sobic001G318432--Sobic001G214300 Sobic001G318432--Sobic006G048600 Sobic003G029700 Sobic003G029700 Sobic001G318432--Sobic003G029700 Sobic006G228500 Sobic006G228500 Sobic001G318432--Sobic006G228500 Sobic001G318432--Sobic004G341900 Sobic001G318432--Sobic006G048500 Sobic003G429650 Sobic003G429650 Sobic001G318432--Sobic003G429650 Sobic002G006900 Sobic002G006900 Sobic001G318432--Sobic002G006900 Sobic006G182900 Sobic006G182900 Sobic001G318432--Sobic006G182900 Sobic002G006600--Sobic003G017100 Sobic002G006600--Sobic001G198100 Sobic002G006600--Sobic010G002700 Sobic002G006600--Sobic001G169900 Sobic002G006600--Sobic003G429650 Sobic004G164400 Sobic004G164400 Sobic002G006600--Sobic004G164400 Sobic002G006600--Sobic006G182900 Sobic009G209300 Sobic009G209300 Sobic002G006600--Sobic009G209300 Sobic002G006600--Sobic006G105400
Octagon: transcription factors


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