Gene annotation
Transcriptome id Sobic.002G138100.4,Sobic.002G138100.2,Sobic.002G138100.1,Sobic.002G138100.3
Synonym Sb02g012510
Functional annotation ACT domain containing protein, expressed
UniProt A0A1W0W3R0 , A0A1B6QB43 , A0A1W0W3X6 , A0A1B6QB37
Pfam -
Panther DB PTHR31096 PTHR31096:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G36840 : ACT-like superfamily protein
RAP-DB (Rice) LOC_Os09g39740.1 : ACT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a046069 , Zm00025a013484
Brachypodium KQJ91634
Barley -
Wheat TraesCS4A02G311700
Populus -


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cDNA sequences
Sobic.002G138100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G394800 tetratricopeptide repeat domain containing protein, expressed -
2 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
3 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
4 Sobic.009G228100 -(PubMedID : 23915383)@ubiquitin conjugating enzyme protein, putative, expressed K10581: ubiquitin-conjugating enzyme E2 O
5 Sobic.001G169900 seed maturation protein PM23, putative, expressed -
6 Sobic.003G103300 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor, putative, expressed K00099: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
7 Sobic.003G003450 - K01177: beta-amylase
8 Sobic.003G057233 - -
9 Sobic.002G356900 threonyl-tRNA synthetase, putative, expressed K01868: TARS, threonyl-tRNA synthetase
10 Sobic.007G090900 heat shock protein-related, putative, expressed -
11 Sobic.003G029500 zinc finger, C3HC4 type family protein, expressed -
12 Sobic.007G124500 methyltransferase, putative, expressed -
13 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
14 Sobic.004G035900 expressed protein -
15 Sobic.006G142600 lipase class 3 family protein, putative, expressed -
16 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
17 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.001G015200 Unnamed(PubMedID : 24676859)@S1 RNA binding domain containing protein, expressed -
20 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase


Gene co-expression network
sample Sobic002G138100 Sobic002G138100 Sobic001G394800 Sobic001G394800 Sobic002G138100--Sobic001G394800 Sobic007G010800 Sobic007G010800 Sobic002G138100--Sobic007G010800 Sobic009G040400 Sobic009G040400 Sobic002G138100--Sobic009G040400 Sobic009G228100 Sobic009G228100 Sobic002G138100--Sobic009G228100 Sobic001G169900 Sobic001G169900 Sobic002G138100--Sobic001G169900 Sobic003G103300 Sobic003G103300 Sobic002G138100--Sobic003G103300 Sobic003G003450 Sobic003G003450 Sobic002G138100--Sobic003G003450 Sobic003G057233 Sobic003G057233 Sobic002G138100--Sobic003G057233 Sobic002G356900 Sobic002G356900 Sobic002G138100--Sobic002G356900 Sobic001G394800--Sobic002G138100 Sobic001G394800--Sobic001G169900 Sobic001G394800--Sobic003G003450 Sobic001G394800--Sobic003G057233 Sobic001G394800--Sobic007G010800 Sobic001G283100 Sobic001G283100 Sobic001G394800--Sobic001G283100 Sobic004G035900 Sobic004G035900 Sobic001G394800--Sobic004G035900 Sobic001G054000 Sobic001G054000 Sobic001G394800--Sobic001G054000 Sobic007G227100 Sobic007G227100 Sobic001G394800--Sobic007G227100 Sobic007G010800--Sobic002G356900 Sobic001G018000 Sobic001G018000 Sobic007G010800--Sobic001G018000 Sobic010G100900 Sobic010G100900 Sobic007G010800--Sobic010G100900 Sobic007G010800--Sobic009G040400 Sobic002G351200 Sobic002G351200 Sobic007G010800--Sobic002G351200 Sobic007G010800--Sobic003G003450 Sobic004G268400 Sobic004G268400 Sobic007G010800--Sobic004G268400 Sobic004G317700 Sobic004G317700 Sobic007G010800--Sobic004G317700 Sobic003G186800 Sobic003G186800 Sobic007G010800--Sobic003G186800 Sobic009G040400--Sobic007G010800 Sobic005G132000 Sobic005G132000 Sobic009G040400--Sobic005G132000 Sobic003G105900 Sobic003G105900 Sobic009G040400--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic009G040400--Sobic005G201000 Sobic003G029500 Sobic003G029500 Sobic009G040400--Sobic003G029500 Sobic010G092350 Sobic010G092350 Sobic009G040400--Sobic010G092350 Sobic002G275200 Sobic002G275200 Sobic009G040400--Sobic002G275200 Sobic009G040400--Sobic002G356900 Sobic009G040400--Sobic002G138100 Sobic010G255700 Sobic010G255700 Sobic009G228100--Sobic010G255700 Sobic009G228100--Sobic002G138100 Sobic009G228100--Sobic001G169900 Sobic009G228100--Sobic003G057233 Sobic009G228100--Sobic003G029500 Sobic009G228100--Sobic001G394800 Sobic010G248700 Sobic010G248700 Sobic009G228100--Sobic010G248700 Sobic001G318432 Sobic001G318432 Sobic009G228100--Sobic001G318432 Sobic002G006600 Sobic002G006600 Sobic009G228100--Sobic002G006600 Sobic010G002700 Sobic010G002700 Sobic001G169900--Sobic010G002700 Sobic006G158100 Sobic006G158100 Sobic001G169900--Sobic006G158100 Sobic010G043800 Sobic010G043800 Sobic001G169900--Sobic010G043800 Sobic007G136200 Sobic007G136200 Sobic001G169900--Sobic007G136200 Sobic001G198100 Sobic001G198100 Sobic001G169900--Sobic001G198100 Sobic006G142600 Sobic006G142600 Sobic001G169900--Sobic006G142600 Sobic001G169900--Sobic001G394800 Sobic001G017300 Sobic001G017300 Sobic001G169900--Sobic001G017300 Sobic003G017100 Sobic003G017100 Sobic001G169900--Sobic003G017100 Sobic001G015200 Sobic001G015200 Sobic003G103300--Sobic001G015200 Sobic008G088821 Sobic008G088821 Sobic003G103300--Sobic008G088821 Sobic003G103300--Sobic004G268400 Sobic010G101000 Sobic010G101000 Sobic003G103300--Sobic010G101000 Sobic003G103300--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic003G103300--Sobic001G411100 Sobic001G104700 Sobic001G104700 Sobic003G103300--Sobic001G104700 Sobic002G060800 Sobic002G060800 Sobic003G103300--Sobic002G060800 Sobic003G103300--Sobic002G351200 Sobic009G073900 Sobic009G073900 Sobic003G003450--Sobic009G073900 Sobic001G077300 Sobic001G077300 Sobic003G003450--Sobic001G077300 Sobic001G509200 Sobic001G509200 Sobic003G003450--Sobic001G509200 Sobic006G213700 Sobic006G213700 Sobic003G003450--Sobic006G213700 Sobic002G081400 Sobic002G081400 Sobic003G003450--Sobic002G081400 Sobic006G232600 Sobic006G232600 Sobic003G003450--Sobic006G232600 Sobic006G090100 Sobic006G090100 Sobic003G003450--Sobic006G090100 Sobic007G087100 Sobic007G087100 Sobic003G003450--Sobic007G087100 Sobic001G207800 Sobic001G207800 Sobic003G003450--Sobic001G207800 Sobic003G057233--Sobic001G394800 Sobic003G057233--Sobic001G169900 Sobic003G057233--Sobic001G198100 Sobic003G057233--Sobic003G017100 Sobic004G258700 Sobic004G258700 Sobic003G057233--Sobic004G258700 Sobic003G057233--Sobic010G248700 Sobic010G132600 Sobic010G132600 Sobic003G057233--Sobic010G132600 Sobic003G057233--Sobic010G002700 Sobic006G219150 Sobic006G219150 Sobic003G057233--Sobic006G219150 Sobic002G356900--Sobic010G100900 Sobic002G356900--Sobic007G087100 Sobic004G300100 Sobic004G300100 Sobic002G356900--Sobic004G300100 Sobic003G380200 Sobic003G380200 Sobic002G356900--Sobic003G380200 Sobic009G170200 Sobic009G170200 Sobic002G356900--Sobic009G170200 Sobic002G356900--Sobic007G010800 Sobic002G356900--Sobic004G268400 Sobic010G231500 Sobic010G231500 Sobic002G356900--Sobic010G231500 Sobic002G356900--Sobic004G317700
Octagon: transcription factors


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