Gene annotation
Transcriptome id Sobic.003G162400.1
Synonym Sb03g014690
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XKI9
Pfam PF12146
Panther DB PTHR22753 PTHR22753:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G54570 : Esterase/lipase/thioesterase family protein
RAP-DB (Rice) LOC_Os01g26039.1 : expressed protein
MaizeGDB (Corn) Zm00025a024523
Brachypodium KQK04293
Barley HORVU1Hr1G039540.4 , HORVU1Hr1G039540.5 , HORVU1Hr1G039540.2 , HORVU1Hr1G039540.6 , HORVU1Hr1G039540.7 , HORVU1Hr1G039540.9 , HORVU1Hr1G039540.10 , HORVU1Hr1G039540.11 , HORVU1Hr1G039540.12 , HORVU1Hr1G039540.13 , HORVU1Hr1G039540.14 , HORVU1Hr1G039540.15 , HORVU1Hr1G039540.16 , HORVU1Hr1G039540.17 , HORVU1Hr1G039540.18 , HORVU1Hr1G039540.19 , HORVU1Hr1G039540.3 , HORVU1Hr1G039540.1
Wheat TraesCS6D02G082200 , TraesCS6A02G100300 , TraesCS6B02G128300 , TraesCS1B02G167800 , TraesCS6B02G128200 , TraesCS1A02G149800 , TraesCS1D02G147000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G112900 expressed protein -
2 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
4 Sobic.005G002400 expressed protein -
5 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
6 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
7 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
8 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G304300 expressed protein -
10 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
12 Sobic.010G104700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@caleosin related protein, putative, expressed K17991: peroxygenase
13 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
14 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
15 Sobic.008G002400 expressed protein -
16 Sobic.003G355500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
17 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
18 Sobic.009G246400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
19 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
20 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -


Gene co-expression network
sample Sobic003G162400 Sobic003G162400 Sobic001G112900 Sobic001G112900 Sobic003G162400--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic003G162400--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic003G162400--Sobic004G344600 Sobic005G002400 Sobic005G002400 Sobic003G162400--Sobic005G002400 Sobic010G113200 Sobic010G113200 Sobic003G162400--Sobic010G113200 Sobic002G161400 Sobic002G161400 Sobic003G162400--Sobic002G161400 Sobic003G326000 Sobic003G326000 Sobic003G162400--Sobic003G326000 Sobic003G440300 Sobic003G440300 Sobic003G162400--Sobic003G440300 Sobic003G304300 Sobic003G304300 Sobic003G162400--Sobic003G304300 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic003G339200--Sobic001G112900 Sobic003G339200--Sobic004G344600 Sobic003G339200--Sobic002G161400 Sobic003G339200--Sobic003G304300 Sobic003G339200--Sobic010G113200 Sobic009G246400 Sobic009G246400 Sobic003G339200--Sobic009G246400 Sobic003G339200--Sobic003G162400 Sobic003G339200--Sobic006G191500 Sobic003G339200--Sobic010G104700 Sobic004G344600--Sobic002G161400 Sobic004G344600--Sobic001G112900 Sobic004G344600--Sobic003G339200 Sobic004G344600--Sobic003G304300 Sobic004G344600--Sobic006G191500 Sobic004G344600--Sobic010G104700 Sobic001G485100 Sobic001G485100 Sobic004G344600--Sobic001G485100 Sobic004G128900 Sobic004G128900 Sobic004G344600--Sobic004G128900 Sobic004G344600--Sobic009G246400 Sobic008G002400 Sobic008G002400 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic001G181100 Sobic001G181100 Sobic005G002400--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic010G271800 Sobic010G271800 Sobic005G002400--Sobic010G271800 Sobic006G020300 Sobic006G020300 Sobic005G002400--Sobic006G020300 Sobic003G154400 Sobic003G154400 Sobic005G002400--Sobic003G154400 Sobic010G113200--Sobic001G112900 Sobic010G113200--Sobic003G339200 Sobic010G113200--Sobic003G304300 Sobic010G113200--Sobic009G246400 Sobic010G113200--Sobic005G002400 Sobic010G113200--Sobic002G161400 Sobic002G351200 Sobic002G351200 Sobic010G113200--Sobic002G351200 Sobic010G113200--Sobic004G344600 Sobic010G113200--Sobic003G162400 Sobic002G161400--Sobic006G191500 Sobic002G161400--Sobic004G344600 Sobic002G161400--Sobic004G128900 Sobic002G161400--Sobic003G304300 Sobic002G161400--Sobic001G485100 Sobic004G153900 Sobic004G153900 Sobic002G161400--Sobic004G153900 Sobic002G161400--Sobic003G339200 Sobic003G380200 Sobic003G380200 Sobic002G161400--Sobic003G380200 Sobic002G161400--Sobic001G112900 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic004G214800 Sobic004G214800 Sobic003G326000--Sobic004G214800 Sobic003G326000--Sobic008G002400 Sobic003G326000--Sobic001G181100 Sobic003G326000--Sobic002G052100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic006G154800 Sobic006G154800 Sobic003G326000--Sobic006G154800 Sobic003G440300--Sobic004G190100 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G188200 Sobic003G188200 Sobic003G440300--Sobic003G188200 Sobic002G291800 Sobic002G291800 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic003G440300--Sobic006G154800 Sobic004G323400 Sobic004G323400 Sobic003G440300--Sobic004G323400 Sobic004G267700 Sobic004G267700 Sobic003G304300--Sobic004G267700 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic003G304300--Sobic002G161400 Sobic003G304300--Sobic004G344600 Sobic003G304300--Sobic001G112900 Sobic003G186800 Sobic003G186800 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic004G268400 Sobic004G268400 Sobic003G304300--Sobic004G268400
Octagon: transcription factors


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