Gene annotation
Transcriptome id Sobic.003G355500.1
Synonym Sb03g039770
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
oxidoreductase, aldo/keto reductase family protein, putative, expressed
UniProt C5XPS4
Pfam PF00248
Panther DB PTHR11732 PTHR11732:SF222
NCBI CDD KOG1577; Aldo/keto reductase family proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37790 : NAD(P)-linked oxidoreductase superfamily protein
RAP-DB (Rice) LOC_Os01g62870.1 : oxidoreductase, aldo/keto reductase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039656 , Zm00025a026863
Brachypodium KQK10565 , KQJ98515 , KQJ98514 , KQJ98513
Barley HORVU3Hr1G007410.9 , HORVU3Hr1G007410.8 , HORVU3Hr1G007410.3 , HORVU3Hr1G007410.2 , HORVU3Hr1G007410.1 , HORVU3Hr1G007410.7 , HORVU3Hr1G007410.6 , HORVU3Hr1G007410.5 , HORVU3Hr1G007410.4 , HORVU3Hr1G085780.10 , HORVU3Hr1G007410.19 , HORVU3Hr1G007410.18 , HORVU3Hr1G007410.13 , HORVU3Hr1G007410.12 , HORVU3Hr1G007410.11 , HORVU3Hr1G007410.10 , HORVU3Hr1G007410.17 , HORVU3Hr1G007410.16 , HORVU3Hr1G007410.15 , HORVU3Hr1G007410.14 , HORVU2Hr1G073270.11 , HORVU2Hr1G073270.10 , HORVU2Hr1G073270.13 , HORVU2Hr1G069910.19 , HORVU2Hr1G069910.18 , HORVU2Hr1G069910.17 , HORVU2Hr1G069910.16 , HORVU2Hr1G069910.14 , HORVU2Hr1G069910.13 , HORVU2Hr1G069910.12 , HORVU2Hr1G069910.11 , HORVU2Hr1G069910.10 , HORVU2Hr1G069910.31 , HORVU2Hr1G069910.30 , HORVU2Hr1G069910.33 , HORVU2Hr1G069910.32 , HORVU2Hr1G069910.35 , HORVU2Hr1G069910.34 , HORVU2Hr1G069910.37 , HORVU2Hr1G069910.38 , HORVU2Hr1G069910.7 , HORVU2Hr1G069910.6 , HORVU2Hr1G069910.5 , HORVU2Hr1G069910.4 , HORVU2Hr1G069910.3 , HORVU2Hr1G069910.2 , HORVU2Hr1G069910.1 , HORVU2Hr1G069910.9 , HORVU2Hr1G069910.8 , HORVU3Hr1G085810.1 , HORVU3Hr1G085810.3 , HORVU3Hr1G085810.2 , HORVU2Hr1G069910.26 , HORVU2Hr1G069910.27 , HORVU2Hr1G069910.24 , HORVU2Hr1G069910.25 , HORVU2Hr1G069910.22 , HORVU2Hr1G069910.23 , HORVU2Hr1G069910.20 , HORVU2Hr1G069910.21 , HORVU2Hr1G069910.28 , HORVU2Hr1G069910.29 , HORVU3Hr1G007410.20 , HORVU3Hr1G007410.21 , HORVU2Hr1G073270.9 , HORVU2Hr1G073270.8 , HORVU2Hr1G073270.1 , HORVU2Hr1G073270.3 , HORVU2Hr1G073270.5 , HORVU2Hr1G073270.7 , HORVU2Hr1G073270.6 , HORVU3Hr1G085780.5 , HORVU3Hr1G085780.4 , HORVU3Hr1G085780.7 , HORVU3Hr1G085780.6 , HORVU3Hr1G085780.1 , HORVU3Hr1G085780.3 , HORVU3Hr1G085780.2 , HORVU3Hr1G085780.9 , HORVU3Hr1G085780.8 , HORVU3Hr1G085780.32 , HORVU3Hr1G085800.1 , HORVU3Hr1G085780.26
Wheat TraesCS1B02G027700 , TraesCS1B02G027700 , TraesCS3D02G356900 , TraesCS1B02G026600 , TraesCS1B02G026600 , TraesCS1B02G027200 , TraesCS3B02G395600 , TraesCS1B02G027700 , TraesCS1A02G021900 , TraesCS3A02G038400 , TraesCS1D02G021100 , TraesCS3D02G041300 , TraesCS3B02G045400 , TraesCS3A02G363400
Populus -


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cDNA sequences
Sobic.003G355500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G071800 "s cinnamyl alcohol dehydrogenases, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
3 Sobic.001G112900 expressed protein -
4 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
6 Sobic.005G176100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mannose-6-phosphate isomerase, putative, expressed K01809: manA, mannose-6-phosphate isomerase
7 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
9 Sobic.002G293500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sialin, putative, expressed -
10 Sobic.005G002400 expressed protein -
11 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
12 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
13 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
14 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
16 Sobic.002G204300 BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed -
17 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
18 Sobic.003G327800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K09754: CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
19 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
20 Sobic.004G047300 receptor-like protein kinase precursor, putative, expressed -


Gene co-expression network
sample Sobic003G355500 Sobic003G355500 Sobic003G162400 Sobic003G162400 Sobic003G355500--Sobic003G162400 Sobic010G071800 Sobic010G071800 Sobic003G355500--Sobic010G071800 Sobic001G112900 Sobic001G112900 Sobic003G355500--Sobic001G112900 Sobic003G440300 Sobic003G440300 Sobic003G355500--Sobic003G440300 Sobic003G428600 Sobic003G428600 Sobic003G355500--Sobic003G428600 Sobic005G176100 Sobic005G176100 Sobic003G355500--Sobic005G176100 Sobic006G154800 Sobic006G154800 Sobic003G355500--Sobic006G154800 Sobic002G291800 Sobic002G291800 Sobic003G355500--Sobic002G291800 Sobic002G293500 Sobic002G293500 Sobic003G355500--Sobic002G293500 Sobic003G162400--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic003G162400--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic003G162400--Sobic004G344600 Sobic005G002400 Sobic005G002400 Sobic003G162400--Sobic005G002400 Sobic010G113200 Sobic010G113200 Sobic003G162400--Sobic010G113200 Sobic002G161400 Sobic002G161400 Sobic003G162400--Sobic002G161400 Sobic003G326000 Sobic003G326000 Sobic003G162400--Sobic003G326000 Sobic003G162400--Sobic003G440300 Sobic003G304300 Sobic003G304300 Sobic003G162400--Sobic003G304300 Sobic010G071800--Sobic003G355500 Sobic008G167600 Sobic008G167600 Sobic010G071800--Sobic008G167600 Sobic003G426900 Sobic003G426900 Sobic010G071800--Sobic003G426900 Sobic010G071800--Sobic003G428600 Sobic010G071800--Sobic003G162400 Sobic010G071800--Sobic002G291800 Sobic010G071800--Sobic003G440300 Sobic003G425300 Sobic003G425300 Sobic010G071800--Sobic003G425300 Sobic010G230500 Sobic010G230500 Sobic010G071800--Sobic010G230500 Sobic001G112900--Sobic003G339200 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic001G112900--Sobic002G161400 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic004G190100 Sobic004G190100 Sobic003G440300--Sobic004G190100 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G188200 Sobic003G188200 Sobic003G440300--Sobic003G188200 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic003G440300--Sobic006G154800 Sobic004G323400 Sobic004G323400 Sobic003G440300--Sobic004G323400 Sobic003G428600--Sobic003G304300 Sobic010G101000 Sobic010G101000 Sobic003G428600--Sobic010G101000 Sobic003G186800 Sobic003G186800 Sobic003G428600--Sobic003G186800 Sobic003G428600--Sobic010G104700 Sobic002G351200 Sobic002G351200 Sobic003G428600--Sobic002G351200 Sobic009G225600 Sobic009G225600 Sobic003G428600--Sobic009G225600 Sobic001G018000 Sobic001G018000 Sobic003G428600--Sobic001G018000 Sobic003G428600--Sobic001G112900 Sobic004G268400 Sobic004G268400 Sobic003G428600--Sobic004G268400 Sobic005G176100--Sobic001G112900 Sobic005G176100--Sobic003G339200 Sobic005G176100--Sobic004G344600 Sobic002G052100 Sobic002G052100 Sobic005G176100--Sobic002G052100 Sobic005G176100--Sobic003G162400 Sobic001G181100 Sobic001G181100 Sobic005G176100--Sobic001G181100 Sobic004G282900 Sobic004G282900 Sobic005G176100--Sobic004G282900 Sobic004G214800 Sobic004G214800 Sobic005G176100--Sobic004G214800 Sobic010G183600 Sobic010G183600 Sobic005G176100--Sobic010G183600 Sobic006G154800--Sobic003G326000 Sobic010G271800 Sobic010G271800 Sobic006G154800--Sobic010G271800 Sobic006G154800--Sobic004G190100 Sobic006G154800--Sobic005G002400 Sobic006G154800--Sobic003G440300 Sobic008G002400 Sobic008G002400 Sobic006G154800--Sobic008G002400 Sobic006G154800--Sobic001G112900 Sobic004G217500 Sobic004G217500 Sobic006G154800--Sobic004G217500 Sobic006G154800--Sobic010G113200 Sobic010G223200 Sobic010G223200 Sobic002G291800--Sobic010G223200 Sobic002G291800--Sobic008G167600 Sobic002G291800--Sobic003G162400 Sobic006G235300 Sobic006G235300 Sobic002G291800--Sobic006G235300 Sobic002G291800--Sobic003G440300 Sobic004G127800 Sobic004G127800 Sobic002G291800--Sobic004G127800 Sobic002G291800--Sobic004G190100 Sobic002G275100 Sobic002G275100 Sobic002G291800--Sobic002G275100 Sobic002G291800--Sobic001G112900 Sobic004G153900 Sobic004G153900 Sobic002G293500--Sobic004G153900 Sobic001G046000 Sobic001G046000 Sobic002G293500--Sobic001G046000 Sobic002G293500--Sobic002G161400 Sobic001G331600 Sobic001G331600 Sobic002G293500--Sobic001G331600 Sobic004G312600 Sobic004G312600 Sobic002G293500--Sobic004G312600 Sobic002G293500--Sobic004G127800 Sobic007G227100 Sobic007G227100 Sobic002G293500--Sobic007G227100 Sobic010G131700 Sobic010G131700 Sobic002G293500--Sobic010G131700 Sobic001G485100 Sobic001G485100 Sobic002G293500--Sobic001G485100
Octagon: transcription factors


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