Gene annotation
Transcriptome id Sobic.002G204300.1
Synonym ENP, MAB4, Sb02g024890, NPY1
Functional annotation BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
UniProt C5XCW0
Pfam PF00651 PF03000
Panther DB PTHR32370 PTHR32370:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0004871obsolete signal transducer activity


Orthologs (automatic annotation)
TAIR AT4G31820 : Phototropic-responsive NPH3 family protein
RAP-DB (Rice) LOC_Os09g25330.1 : BTBN19 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed
MaizeGDB (Corn) Zm00025a013929 , Zm00025a047019
Brachypodium PNT64589 , PNT64588 , KQJ90269 , KQJ90268
Barley HORVU5Hr1G064620.5 , HORVU5Hr1G064620.4 , HORVU5Hr1G064620.1 , HORVU5Hr1G064620.3 , HORVU5Hr1G064620.2
Wheat TraesCS5D02G231300 , TraesCS5D02G231300 , TraesCS5B02G222700 , TraesCS5B02G222700 , TraesCS5A02G223800 , TraesCS5A02G223800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G355500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
2 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
3 Sobic.005G002400 expressed protein -
4 Sobic.008G002400 expressed protein -
5 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
6 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH
8 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.010G092350 - -
10 Sobic.001G112900 expressed protein -
11 Sobic.007G010800 similar to Os01g0104100 protein(PubMedID : 29862293)@expressed protein -
12 Sobic.009G162600 OsFtsH8 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
13 Sobic.006G154800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
15 Sobic.002G138100 ACT domain containing protein, expressed -
16 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
17 Sobic.003G304300 expressed protein -
18 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
19 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
20 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -


Gene co-expression network
sample Sobic002G204300 Sobic002G204300 Sobic003G355500 Sobic003G355500 Sobic002G204300--Sobic003G355500 Sobic009G040400 Sobic009G040400 Sobic002G204300--Sobic009G040400 Sobic005G002400 Sobic005G002400 Sobic002G204300--Sobic005G002400 Sobic008G002400 Sobic008G002400 Sobic002G204300--Sobic008G002400 Sobic010G113200 Sobic010G113200 Sobic002G204300--Sobic010G113200 Sobic003G162400 Sobic003G162400 Sobic002G204300--Sobic003G162400 Sobic010G223200 Sobic010G223200 Sobic002G204300--Sobic010G223200 Sobic003G440300 Sobic003G440300 Sobic002G204300--Sobic003G440300 Sobic010G092350 Sobic010G092350 Sobic002G204300--Sobic010G092350 Sobic003G355500--Sobic003G162400 Sobic010G071800 Sobic010G071800 Sobic003G355500--Sobic010G071800 Sobic001G112900 Sobic001G112900 Sobic003G355500--Sobic001G112900 Sobic003G355500--Sobic003G440300 Sobic003G428600 Sobic003G428600 Sobic003G355500--Sobic003G428600 Sobic005G176100 Sobic005G176100 Sobic003G355500--Sobic005G176100 Sobic006G154800 Sobic006G154800 Sobic003G355500--Sobic006G154800 Sobic002G291800 Sobic002G291800 Sobic003G355500--Sobic002G291800 Sobic002G293500 Sobic002G293500 Sobic003G355500--Sobic002G293500 Sobic007G010800 Sobic007G010800 Sobic009G040400--Sobic007G010800 Sobic005G132000 Sobic005G132000 Sobic009G040400--Sobic005G132000 Sobic003G105900 Sobic003G105900 Sobic009G040400--Sobic003G105900 Sobic005G201000 Sobic005G201000 Sobic009G040400--Sobic005G201000 Sobic003G029500 Sobic003G029500 Sobic009G040400--Sobic003G029500 Sobic009G040400--Sobic010G092350 Sobic002G275200 Sobic002G275200 Sobic009G040400--Sobic002G275200 Sobic002G356900 Sobic002G356900 Sobic009G040400--Sobic002G356900 Sobic002G138100 Sobic002G138100 Sobic009G040400--Sobic002G138100 Sobic005G002400--Sobic008G002400 Sobic003G326000 Sobic003G326000 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic001G181100 Sobic001G181100 Sobic005G002400--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic010G271800 Sobic010G271800 Sobic005G002400--Sobic010G271800 Sobic006G020300 Sobic006G020300 Sobic005G002400--Sobic006G020300 Sobic003G154400 Sobic003G154400 Sobic005G002400--Sobic003G154400 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic008G002400--Sobic010G113200 Sobic010G113200--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic010G113200--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic010G113200--Sobic003G304300 Sobic009G246400 Sobic009G246400 Sobic010G113200--Sobic009G246400 Sobic010G113200--Sobic005G002400 Sobic002G161400 Sobic002G161400 Sobic010G113200--Sobic002G161400 Sobic002G351200 Sobic002G351200 Sobic010G113200--Sobic002G351200 Sobic004G344600 Sobic004G344600 Sobic010G113200--Sobic004G344600 Sobic010G113200--Sobic003G162400 Sobic003G162400--Sobic001G112900 Sobic003G162400--Sobic003G339200 Sobic003G162400--Sobic004G344600 Sobic003G162400--Sobic005G002400 Sobic003G162400--Sobic010G113200 Sobic003G162400--Sobic002G161400 Sobic003G162400--Sobic003G326000 Sobic003G162400--Sobic003G440300 Sobic003G162400--Sobic003G304300 Sobic002G060800 Sobic002G060800 Sobic010G223200--Sobic002G060800 Sobic010G223200--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic010G223200--Sobic007G006200 Sobic010G223200--Sobic002G351200 Sobic004G271600 Sobic004G271600 Sobic010G223200--Sobic004G271600 Sobic004G317700 Sobic004G317700 Sobic010G223200--Sobic004G317700 Sobic002G275100 Sobic002G275100 Sobic010G223200--Sobic002G275100 Sobic010G207100 Sobic010G207100 Sobic010G223200--Sobic010G207100 Sobic002G132400 Sobic002G132400 Sobic010G223200--Sobic002G132400 Sobic003G440300--Sobic004G190100 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G188200 Sobic003G188200 Sobic003G440300--Sobic003G188200 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic003G440300--Sobic006G154800 Sobic004G323400 Sobic004G323400 Sobic003G440300--Sobic004G323400 Sobic010G092350--Sobic010G223200 Sobic010G092350--Sobic009G040400 Sobic010G092350--Sobic010G207100 Sobic004G300100 Sobic004G300100 Sobic010G092350--Sobic004G300100 Sobic010G092350--Sobic002G356900 Sobic010G092350--Sobic004G271600 Sobic010G092350--Sobic003G029500 Sobic010G092350--Sobic002G060800 Sobic010G092350--Sobic002G291800
Octagon: transcription factors


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