Gene annotation
Transcriptome id Sobic.003G327800.1
Synonym CYP98A3, Sb03g037380
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5XMI3
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF0
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K09754; CYP98A, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G40890 : cytochrome P450, family 98, subfamily A, polypeptide 3
RAP-DB (Rice) LOC_Os05g41440.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a027173 , Zm00025a044084
Brachypodium KQK05634
Barley HORVU1Hr1G068030.4 , HORVU1Hr1G068030.1 , HORVU1Hr1G068030.2 , HORVU1Hr1G068030.3 , HORVU0Hr1G031710.2 , HORVU0Hr1G031710.3 , HORVU0Hr1G031710.1 , HORVU5Hr1G074170.1 , HORVU5Hr1G074170.2 , HORVU5Hr1G074170.3 , HORVU3Hr1G078660.4 , HORVU3Hr1G078660.5 , HORVU3Hr1G078660.2 , HORVU3Hr1G078660.3 , HORVU3Hr1G078660.1
Wheat TraesCS1B02G321800 , TraesCS2D02G504100 , TraesCS5A02G270700 , TraesCS1A02G310500 , TraesCS1D02G310000 , TraesCS3A02G331800 , TraesCS1B02G321800 , TraesCS3D02G325300 , TraesCS4B02G393700 , TraesCSU02G032400 , TraesCSU02G032500 , TraesCS4B02G330500 , TraesCS2B02G531600 , TraesCS5A02G502000 , TraesCS5A02G554000 , TraesCS3B02G361900
Populus -


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cDNA sequences
Sobic.003G327800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G428600 amidohydrolase, putative, expressed K07047: N-substituted formamide deformylase
2 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
3 Sobic.003G355500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.005G134100 rubredoxin family protein, putative, expressed -
5 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
6 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
7 Sobic.001G352200 heavy metal-associated domain containing protein, expressed -
8 Sobic.009G123300 NAD dependent epimerase/dehydratase family protein, putative, expressed K06118: SQD1, UDP-sulfoquinovose synthase
9 Sobic.005G062700 nifU, putative, expressed -
10 Sobic.006G188200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K15746: beta-carotene 3-hydroxylase
11 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
12 Sobic.001G112900 expressed protein -
13 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
15 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
16 Sobic.003G304300 expressed protein -
17 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G016600 expressed protein -
19 Sobic.008G088821 - K05356: SPS, all-trans-nonaprenyl-diphosphate synthase
20 Sobic.006G140500 photosystem-II repair protein, putative, expressed -


Gene co-expression network
sample Sobic003G327800 Sobic003G327800 Sobic003G428600 Sobic003G428600 Sobic003G327800--Sobic003G428600 Sobic002G338800 Sobic002G338800 Sobic003G327800--Sobic002G338800 Sobic003G355500 Sobic003G355500 Sobic003G327800--Sobic003G355500 Sobic005G134100 Sobic005G134100 Sobic003G327800--Sobic005G134100 Sobic003G186800 Sobic003G186800 Sobic003G327800--Sobic003G186800 Sobic009G245000 Sobic009G245000 Sobic003G327800--Sobic009G245000 Sobic001G352200 Sobic001G352200 Sobic003G327800--Sobic001G352200 Sobic009G123300 Sobic009G123300 Sobic003G327800--Sobic009G123300 Sobic005G062700 Sobic005G062700 Sobic003G327800--Sobic005G062700 Sobic003G304300 Sobic003G304300 Sobic003G428600--Sobic003G304300 Sobic010G101000 Sobic010G101000 Sobic003G428600--Sobic010G101000 Sobic003G428600--Sobic003G186800 Sobic010G104700 Sobic010G104700 Sobic003G428600--Sobic010G104700 Sobic002G351200 Sobic002G351200 Sobic003G428600--Sobic002G351200 Sobic009G225600 Sobic009G225600 Sobic003G428600--Sobic009G225600 Sobic001G018000 Sobic001G018000 Sobic003G428600--Sobic001G018000 Sobic001G112900 Sobic001G112900 Sobic003G428600--Sobic001G112900 Sobic004G268400 Sobic004G268400 Sobic003G428600--Sobic004G268400 Sobic002G338800--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic002G338800--Sobic003G339200 Sobic002G338800--Sobic003G304300 Sobic002G338800--Sobic009G245000 Sobic002G338800--Sobic003G186800 Sobic005G002400 Sobic005G002400 Sobic002G338800--Sobic005G002400 Sobic007G016600 Sobic007G016600 Sobic002G338800--Sobic007G016600 Sobic003G154400 Sobic003G154400 Sobic002G338800--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G338800--Sobic004G214800 Sobic003G162400 Sobic003G162400 Sobic003G355500--Sobic003G162400 Sobic010G071800 Sobic010G071800 Sobic003G355500--Sobic010G071800 Sobic003G355500--Sobic001G112900 Sobic003G440300 Sobic003G440300 Sobic003G355500--Sobic003G440300 Sobic003G355500--Sobic003G428600 Sobic005G176100 Sobic005G176100 Sobic003G355500--Sobic005G176100 Sobic006G154800 Sobic006G154800 Sobic003G355500--Sobic006G154800 Sobic002G291800 Sobic002G291800 Sobic003G355500--Sobic002G291800 Sobic002G293500 Sobic002G293500 Sobic003G355500--Sobic002G293500 Sobic004G028300 Sobic004G028300 Sobic005G134100--Sobic004G028300 Sobic008G088821 Sobic008G088821 Sobic005G134100--Sobic008G088821 Sobic006G108200 Sobic006G108200 Sobic005G134100--Sobic006G108200 Sobic006G140500 Sobic006G140500 Sobic005G134100--Sobic006G140500 Sobic001G015200 Sobic001G015200 Sobic005G134100--Sobic001G015200 Sobic001G167900 Sobic001G167900 Sobic005G134100--Sobic001G167900 Sobic005G134100--Sobic005G062700 Sobic002G047400 Sobic002G047400 Sobic005G134100--Sobic002G047400 Sobic004G317700 Sobic004G317700 Sobic005G134100--Sobic004G317700 Sobic003G380200 Sobic003G380200 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic006G191500 Sobic006G191500 Sobic003G186800--Sobic006G191500 Sobic001G485100 Sobic001G485100 Sobic003G186800--Sobic001G485100 Sobic003G186800--Sobic010G101000 Sobic003G186800--Sobic004G268400 Sobic003G186800--Sobic002G047400 Sobic004G267700 Sobic004G267700 Sobic003G186800--Sobic004G267700 Sobic009G245000--Sobic002G338800 Sobic009G245000--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic009G245000--Sobic003G326000 Sobic008G002400 Sobic008G002400 Sobic009G245000--Sobic008G002400 Sobic002G213400 Sobic002G213400 Sobic009G245000--Sobic002G213400 Sobic001G104900 Sobic001G104900 Sobic009G245000--Sobic001G104900 Sobic009G245000--Sobic001G018000 Sobic002G052000 Sobic002G052000 Sobic009G245000--Sobic002G052000 Sobic006G020300 Sobic006G020300 Sobic009G245000--Sobic006G020300 Sobic004G305900 Sobic004G305900 Sobic001G352200--Sobic004G305900 Sobic001G352200--Sobic003G428600 Sobic001G352200--Sobic008G088821 Sobic001G352200--Sobic001G167900 Sobic001G352200--Sobic006G140500 Sobic003G103300 Sobic003G103300 Sobic001G352200--Sobic003G103300 Sobic001G352200--Sobic004G268400 Sobic001G352200--Sobic004G028300 Sobic001G352200--Sobic001G018000 Sobic002G356900 Sobic002G356900 Sobic009G123300--Sobic002G356900 Sobic009G123300--Sobic007G016600 Sobic009G123300--Sobic004G268400 Sobic009G123300--Sobic008G088821 Sobic009G123300--Sobic001G018000 Sobic004G300100 Sobic004G300100 Sobic009G123300--Sobic004G300100 Sobic009G123300--Sobic004G267700 Sobic009G123300--Sobic003G380200 Sobic009G123300--Sobic003G304300 Sobic005G062700--Sobic009G225600 Sobic005G062700--Sobic001G015200 Sobic005G062700--Sobic002G047400 Sobic001G303200 Sobic001G303200 Sobic005G062700--Sobic001G303200 Sobic006G221000 Sobic006G221000 Sobic005G062700--Sobic006G221000 Sobic001G509200 Sobic001G509200 Sobic005G062700--Sobic001G509200 Sobic005G172400 Sobic005G172400 Sobic005G062700--Sobic005G172400 Sobic007G108900 Sobic007G108900 Sobic005G062700--Sobic007G108900 Sobic005G062700--Sobic004G305900
Octagon: transcription factors


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