Gene annotation
Transcriptome id Sobic.001G104900.1
Synonym EGY3, Sb01g009370, ATEGY3
Functional annotation Up-reguralion under heat (PubMedID : 24916767)
Up-reguralion under combine stress of drought and heat (PubMedID : 24916767)
peptidase, M50 family, putative, expressed
UniProt C5WM05
Pfam -
Panther DB PTHR31412 PTHR31412:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G17870 : ethylene-dependent gravitropism-deficient and yellow-green-like 3
RAP-DB (Rice) LOC_Os03g51920.1 : peptidase, M50 family, putative, expressed
MaizeGDB (Corn) Zm00025a007991
Brachypodium PNT74198 , KQK13403
Barley HORVU4Hr1G009990.3 , HORVU4Hr1G009990.2 , HORVU4Hr1G009990.1 , HORVU4Hr1G009990.6 , HORVU4Hr1G009990.5 , HORVU4Hr1G009990.4
Wheat TraesCS4B02G059500 , TraesCS4B02G059500 , TraesCS4D02G059000 , TraesCS4A02G255700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
2 Sobic.004G323400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed -
3 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
4 Sobic.001G112900 expressed protein -
5 Sobic.001G313000 expressed protein -
6 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
7 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
8 Sobic.002G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
9 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
10 Sobic.003G339200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.004G344600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
12 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
13 Sobic.001G485100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
15 Sobic.003G304300 expressed protein -
16 Sobic.006G191500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
17 Sobic.007G121300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5
18 Sobic.002G161400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
19 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -


Gene co-expression network
sample Sobic001G104900 Sobic001G104900 Sobic002G338800 Sobic002G338800 Sobic001G104900--Sobic002G338800 Sobic004G323400 Sobic004G323400 Sobic001G104900--Sobic004G323400 Sobic009G245000 Sobic009G245000 Sobic001G104900--Sobic009G245000 Sobic001G112900 Sobic001G112900 Sobic001G104900--Sobic001G112900 Sobic001G313000 Sobic001G313000 Sobic001G104900--Sobic001G313000 Sobic006G041000 Sobic006G041000 Sobic001G104900--Sobic006G041000 Sobic002G052000 Sobic002G052000 Sobic001G104900--Sobic002G052000 Sobic002G295100 Sobic002G295100 Sobic001G104900--Sobic002G295100 Sobic003G186800 Sobic003G186800 Sobic001G104900--Sobic003G186800 Sobic002G338800--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic002G338800--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic002G338800--Sobic003G304300 Sobic002G338800--Sobic009G245000 Sobic002G338800--Sobic003G186800 Sobic005G002400 Sobic005G002400 Sobic002G338800--Sobic005G002400 Sobic007G016600 Sobic007G016600 Sobic002G338800--Sobic007G016600 Sobic003G154400 Sobic003G154400 Sobic002G338800--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G338800--Sobic004G214800 Sobic002G417300 Sobic002G417300 Sobic004G323400--Sobic002G417300 Sobic004G323400--Sobic002G295100 Sobic003G188200 Sobic003G188200 Sobic004G323400--Sobic003G188200 Sobic004G323400--Sobic001G104900 Sobic003G440300 Sobic003G440300 Sobic004G323400--Sobic003G440300 Sobic003G425300 Sobic003G425300 Sobic004G323400--Sobic003G425300 Sobic004G323400--Sobic006G041000 Sobic004G282900 Sobic004G282900 Sobic004G323400--Sobic004G282900 Sobic002G291800 Sobic002G291800 Sobic004G323400--Sobic002G291800 Sobic009G245000--Sobic002G338800 Sobic009G245000--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic009G245000--Sobic003G326000 Sobic008G002400 Sobic008G002400 Sobic009G245000--Sobic008G002400 Sobic002G213400 Sobic002G213400 Sobic009G245000--Sobic002G213400 Sobic009G245000--Sobic001G104900 Sobic001G018000 Sobic001G018000 Sobic009G245000--Sobic001G018000 Sobic009G245000--Sobic002G052000 Sobic006G020300 Sobic006G020300 Sobic009G245000--Sobic006G020300 Sobic001G112900--Sobic003G339200 Sobic004G344600 Sobic004G344600 Sobic001G112900--Sobic004G344600 Sobic001G112900--Sobic003G304300 Sobic002G161400 Sobic002G161400 Sobic001G112900--Sobic002G161400 Sobic010G113200 Sobic010G113200 Sobic001G112900--Sobic010G113200 Sobic001G112900--Sobic005G002400 Sobic006G191500 Sobic006G191500 Sobic001G112900--Sobic006G191500 Sobic003G162400 Sobic003G162400 Sobic001G112900--Sobic003G162400 Sobic010G104700 Sobic010G104700 Sobic001G112900--Sobic010G104700 Sobic001G313000--Sobic001G112900 Sobic001G313000--Sobic001G104900 Sobic001G313000--Sobic003G339200 Sobic001G313000--Sobic004G344600 Sobic007G121300 Sobic007G121300 Sobic001G313000--Sobic007G121300 Sobic001G313000--Sobic003G304300 Sobic003G340300 Sobic003G340300 Sobic001G313000--Sobic003G340300 Sobic001G313000--Sobic003G188200 Sobic010G183600 Sobic010G183600 Sobic001G313000--Sobic010G183600 Sobic009G259100 Sobic009G259100 Sobic006G041000--Sobic009G259100 Sobic004G190100 Sobic004G190100 Sobic006G041000--Sobic004G190100 Sobic006G041000--Sobic001G112900 Sobic006G041000--Sobic003G440300 Sobic004G267700 Sobic004G267700 Sobic006G041000--Sobic004G267700 Sobic002G351200 Sobic002G351200 Sobic006G041000--Sobic002G351200 Sobic006G041000--Sobic002G213400 Sobic006G041000--Sobic007G121300 Sobic006G041000--Sobic003G304300 Sobic002G052100 Sobic002G052100 Sobic002G052000--Sobic002G052100 Sobic001G181100 Sobic001G181100 Sobic002G052000--Sobic001G181100 Sobic002G052000--Sobic003G188200 Sobic003G175800 Sobic003G175800 Sobic002G052000--Sobic003G175800 Sobic002G052000--Sobic003G154400 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic007G163433 Sobic007G163433 Sobic002G052000--Sobic007G163433 Sobic010G271800 Sobic010G271800 Sobic002G052000--Sobic010G271800 Sobic002G295100--Sobic004G323400 Sobic001G331600 Sobic001G331600 Sobic002G295100--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic002G295100--Sobic001G485100 Sobic002G293500 Sobic002G293500 Sobic002G295100--Sobic002G293500 Sobic004G312600 Sobic004G312600 Sobic002G295100--Sobic004G312600 Sobic001G046000 Sobic001G046000 Sobic002G295100--Sobic001G046000 Sobic009G225600 Sobic009G225600 Sobic002G295100--Sobic009G225600 Sobic006G257800 Sobic006G257800 Sobic002G295100--Sobic006G257800 Sobic002G295100--Sobic003G162400 Sobic003G380200 Sobic003G380200 Sobic003G186800--Sobic003G380200 Sobic003G186800--Sobic003G304300 Sobic003G186800--Sobic009G225600 Sobic003G186800--Sobic006G191500 Sobic003G186800--Sobic001G485100 Sobic010G101000 Sobic010G101000 Sobic003G186800--Sobic010G101000 Sobic004G268400 Sobic004G268400 Sobic003G186800--Sobic004G268400 Sobic002G047400 Sobic002G047400 Sobic003G186800--Sobic002G047400 Sobic003G186800--Sobic004G267700
Octagon: transcription factors


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