Gene annotation
Transcriptome id Sobic.009G245000.2
Synonym Sb09g029610, APL2,
Functional annotation Glucose-1-phosphate adenylyltransferase large subunit (PubMedID : 26186930)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed
UniProt A0A1Z5R3X9
Pfam PF00483
Panther DB PTHR22572 PTHR22572:SF110
NCBI CDD KOG1322; GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase
KEGG Orthology K00975; glucose-1-phosphate adenylyltransferase
Gene Ontology GO:0016779; nucleotidyltransferase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G27680 : ADPGLC-PPase large subunit
RAP-DB (Rice) LOC_Os05g50380.2 : glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010360 , Zm00025a032172 , Zm00025a032173 , Zm00025a044710 , Zm00025a028313 , Zm00025a010361
Brachypodium KQK04661 , KQK04660
Barley HORVU1Hr1G091600.19 , HORVU1Hr1G091600.18 , HORVU1Hr1G091600.17 , HORVU1Hr1G091600.16 , HORVU1Hr1G091600.15 , HORVU1Hr1G091600.14 , HORVU1Hr1G091600.13 , HORVU1Hr1G091600.12 , HORVU1Hr1G091600.11 , HORVU1Hr1G091600.10 , HORVU1Hr1G091600.7 , HORVU1Hr1G091600.6 , HORVU1Hr1G091600.5 , HORVU1Hr1G091600.4 , HORVU1Hr1G091600.3 , HORVU1Hr1G091600.2 , HORVU1Hr1G091600.1 , HORVU1Hr1G091600.9 , HORVU1Hr1G091600.8
Wheat TraesCS1A02G419600 , TraesCS1A02G419600 , TraesCS1B02G449700 , TraesCS1B02G449700 , TraesCS1D02G427400 , TraesCS1D02G427400
Populus -


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cDNA sequences
Sobic.009G245000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G338800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
2 Sobic.005G002400 expressed protein -
3 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
4 Sobic.008G002400 expressed protein -
5 Sobic.002G213400 expressed protein -
6 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
7 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
8 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
9 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
10 Sobic.001G112900 expressed protein -
11 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
12 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
13 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
14 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
15 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
16 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
17 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
18 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
19 Sobic.007G016600 expressed protein -
20 Sobic.003G304300 expressed protein -


Gene co-expression network
sample Sobic009G245000 Sobic009G245000 Sobic002G338800 Sobic002G338800 Sobic009G245000--Sobic002G338800 Sobic005G002400 Sobic005G002400 Sobic009G245000--Sobic005G002400 Sobic003G326000 Sobic003G326000 Sobic009G245000--Sobic003G326000 Sobic008G002400 Sobic008G002400 Sobic009G245000--Sobic008G002400 Sobic002G213400 Sobic002G213400 Sobic009G245000--Sobic002G213400 Sobic001G104900 Sobic001G104900 Sobic009G245000--Sobic001G104900 Sobic001G018000 Sobic001G018000 Sobic009G245000--Sobic001G018000 Sobic002G052000 Sobic002G052000 Sobic009G245000--Sobic002G052000 Sobic006G020300 Sobic006G020300 Sobic009G245000--Sobic006G020300 Sobic001G112900 Sobic001G112900 Sobic002G338800--Sobic001G112900 Sobic003G339200 Sobic003G339200 Sobic002G338800--Sobic003G339200 Sobic003G304300 Sobic003G304300 Sobic002G338800--Sobic003G304300 Sobic002G338800--Sobic009G245000 Sobic003G186800 Sobic003G186800 Sobic002G338800--Sobic003G186800 Sobic002G338800--Sobic005G002400 Sobic007G016600 Sobic007G016600 Sobic002G338800--Sobic007G016600 Sobic003G154400 Sobic003G154400 Sobic002G338800--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G338800--Sobic004G214800 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic001G181100 Sobic001G181100 Sobic005G002400--Sobic001G181100 Sobic002G052100 Sobic002G052100 Sobic005G002400--Sobic002G052100 Sobic004G190100 Sobic004G190100 Sobic005G002400--Sobic004G190100 Sobic010G271800 Sobic010G271800 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic005G002400--Sobic003G154400 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic003G326000--Sobic004G214800 Sobic003G326000--Sobic008G002400 Sobic003G326000--Sobic001G181100 Sobic003G326000--Sobic002G052100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic006G154800 Sobic006G154800 Sobic003G326000--Sobic006G154800 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic010G113200 Sobic010G113200 Sobic008G002400--Sobic010G113200 Sobic002G351200 Sobic002G351200 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic002G213400--Sobic001G018000 Sobic002G213400--Sobic007G016600 Sobic001G434000 Sobic001G434000 Sobic002G213400--Sobic001G434000 Sobic010G100900 Sobic010G100900 Sobic002G213400--Sobic010G100900 Sobic004G268400 Sobic004G268400 Sobic002G213400--Sobic004G268400 Sobic007G124500 Sobic007G124500 Sobic002G213400--Sobic007G124500 Sobic002G213400--Sobic003G304300 Sobic001G104900--Sobic002G338800 Sobic004G323400 Sobic004G323400 Sobic001G104900--Sobic004G323400 Sobic001G104900--Sobic009G245000 Sobic001G104900--Sobic001G112900 Sobic001G313000 Sobic001G313000 Sobic001G104900--Sobic001G313000 Sobic006G041000 Sobic006G041000 Sobic001G104900--Sobic006G041000 Sobic001G104900--Sobic002G052000 Sobic002G295100 Sobic002G295100 Sobic001G104900--Sobic002G295100 Sobic001G104900--Sobic003G186800 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic010G101000 Sobic010G101000 Sobic001G018000--Sobic010G101000 Sobic004G267700 Sobic004G267700 Sobic001G018000--Sobic004G267700 Sobic001G411100 Sobic001G411100 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic002G052000--Sobic002G052100 Sobic002G052000--Sobic001G181100 Sobic003G188200 Sobic003G188200 Sobic002G052000--Sobic003G188200 Sobic003G175800 Sobic003G175800 Sobic002G052000--Sobic003G175800 Sobic002G052000--Sobic003G154400 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic007G163433 Sobic007G163433 Sobic002G052000--Sobic007G163433 Sobic002G052000--Sobic010G271800 Sobic006G020300--Sobic001G434000 Sobic006G020300--Sobic005G002400 Sobic006G020300--Sobic002G052100 Sobic006G020300--Sobic003G154400 Sobic006G020300--Sobic003G175800 Sobic006G020300--Sobic003G326000 Sobic006G020300--Sobic004G214800 Sobic010G104700 Sobic010G104700 Sobic006G020300--Sobic010G104700 Sobic006G020300--Sobic001G181100
Octagon: transcription factors


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