Gene annotation
Transcriptome id Sobic.002G213400.2,Sobic.002G213400.1
Synonym
Functional annotation expressed protein
UniProt C5XDM2
Pfam PF07082
Panther DB PTHR34127:SF1 PTHR34127
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G43540 : Protein of unknown function (DUF1350)
RAP-DB (Rice) LOC_Os09g26580.1 : expressed protein
MaizeGDB (Corn) Zm00025a047126
Brachypodium KQJ90364 , KQJ90363
Barley HORVU5Hr1G062740.9 , HORVU5Hr1G062740.18 , HORVU5Hr1G062740.12 , HORVU5Hr1G062740.11 , HORVU5Hr1G062740.17 , HORVU5Hr1G062740.1 , HORVU5Hr1G062740.3 , HORVU5Hr1G062740.4 , HORVU5Hr1G062740.6 , HORVU5Hr1G062740.22 , HORVU5Hr1G062740.24
Wheat TraesCS5B02G213300 , TraesCS5D02G222700 , TraesCS5A02G211100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G351200 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.010G207100 methyltransferase domain containing protein, putative, expressed -
3 Sobic.001G018000 amine oxidase, flavin-containing, domain containing protein, expressed -
4 Sobic.007G016600 expressed protein -
5 Sobic.001G434000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G100900 alanyl-tRNA synthetase, putative, expressed K01872: AARS, alanyl-tRNA synthetase
7 Sobic.004G268400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein, putative, expressed -
8 Sobic.007G124500 methyltransferase, putative, expressed -
9 Sobic.003G304300 expressed protein -
10 Sobic.004G267700 hydrolase, alpha/beta fold family domain containing protein, expressed -
11 Sobic.003G186800 transporter, major facilitator family, putative, expressed -
12 Sobic.010G113200 UDP-glucoronosyl and UDP-glucosyl transferase, putative, expressed -
13 Sobic.004G125800 tocopherol cyclase, chloroplast precursor, putative, expressed K09834: VTE1, tocopherol cyclase
14 Sobic.001G411100 expressed protein -
15 Sobic.002G030900 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
16 Sobic.010G101000 peptide methionine sulfoxide reductase msrB, putative, expressed K07305: peptide-methionine (R)-S-oxide reductase
17 Sobic.004G271600 region found in RelA/SpoT proteins containing protein, expressed -
18 Sobic.001G104700 expressed protein -
19 Sobic.005G002400 expressed protein -
20 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -


Gene co-expression network
sample Sobic002G213400 Sobic002G213400 Sobic002G351200 Sobic002G351200 Sobic002G213400--Sobic002G351200 Sobic010G207100 Sobic010G207100 Sobic002G213400--Sobic010G207100 Sobic001G018000 Sobic001G018000 Sobic002G213400--Sobic001G018000 Sobic007G016600 Sobic007G016600 Sobic002G213400--Sobic007G016600 Sobic001G434000 Sobic001G434000 Sobic002G213400--Sobic001G434000 Sobic010G100900 Sobic010G100900 Sobic002G213400--Sobic010G100900 Sobic004G268400 Sobic004G268400 Sobic002G213400--Sobic004G268400 Sobic007G124500 Sobic007G124500 Sobic002G213400--Sobic007G124500 Sobic003G304300 Sobic003G304300 Sobic002G213400--Sobic003G304300 Sobic002G351200--Sobic010G100900 Sobic002G351200--Sobic001G018000 Sobic002G351200--Sobic003G304300 Sobic002G351200--Sobic004G268400 Sobic004G267700 Sobic004G267700 Sobic002G351200--Sobic004G267700 Sobic010G101000 Sobic010G101000 Sobic002G351200--Sobic010G101000 Sobic002G132400 Sobic002G132400 Sobic002G351200--Sobic002G132400 Sobic003G186800 Sobic003G186800 Sobic002G351200--Sobic003G186800 Sobic002G351200--Sobic002G213400 Sobic010G207100--Sobic007G016600 Sobic010G207100--Sobic002G213400 Sobic010G207100--Sobic002G351200 Sobic010G207100--Sobic001G018000 Sobic001G411100 Sobic001G411100 Sobic010G207100--Sobic001G411100 Sobic010G207100--Sobic007G124500 Sobic010G207100--Sobic004G268400 Sobic010G207100--Sobic010G100900 Sobic002G356900 Sobic002G356900 Sobic010G207100--Sobic002G356900 Sobic001G018000--Sobic004G268400 Sobic001G018000--Sobic002G351200 Sobic001G018000--Sobic007G016600 Sobic001G018000--Sobic010G101000 Sobic001G018000--Sobic004G267700 Sobic001G018000--Sobic001G411100 Sobic002G030900 Sobic002G030900 Sobic001G018000--Sobic002G030900 Sobic001G018000--Sobic003G304300 Sobic001G018000--Sobic003G186800 Sobic007G016600--Sobic004G268400 Sobic007G016600--Sobic004G267700 Sobic007G016600--Sobic001G018000 Sobic007G016600--Sobic003G304300 Sobic007G016600--Sobic002G351200 Sobic007G016600--Sobic010G100900 Sobic007G016600--Sobic010G207100 Sobic007G016600--Sobic003G186800 Sobic003G380200 Sobic003G380200 Sobic007G016600--Sobic003G380200 Sobic001G434000--Sobic002G351200 Sobic006G020300 Sobic006G020300 Sobic001G434000--Sobic006G020300 Sobic001G434000--Sobic001G018000 Sobic001G434000--Sobic002G030900 Sobic001G434000--Sobic002G213400 Sobic001G434000--Sobic010G101000 Sobic010G104700 Sobic010G104700 Sobic001G434000--Sobic010G104700 Sobic001G434000--Sobic004G267700 Sobic001G434000--Sobic001G411100 Sobic010G100900--Sobic002G351200 Sobic010G100900--Sobic003G380200 Sobic010G100900--Sobic002G132400 Sobic010G100900--Sobic004G268400 Sobic010G100900--Sobic003G304300 Sobic010G100900--Sobic004G267700 Sobic004G271600 Sobic004G271600 Sobic010G100900--Sobic004G271600 Sobic010G100900--Sobic002G356900 Sobic004G128900 Sobic004G128900 Sobic010G100900--Sobic004G128900 Sobic004G268400--Sobic004G267700 Sobic004G268400--Sobic007G016600 Sobic004G268400--Sobic001G018000 Sobic004G268400--Sobic002G351200 Sobic004G268400--Sobic003G304300 Sobic004G268400--Sobic003G186800 Sobic004G268400--Sobic010G100900 Sobic004G268400--Sobic010G101000 Sobic004G268400--Sobic003G380200 Sobic002G072500 Sobic002G072500 Sobic007G124500--Sobic002G072500 Sobic007G124500--Sobic001G411100 Sobic007G166300 Sobic007G166300 Sobic007G124500--Sobic007G166300 Sobic001G509200 Sobic001G509200 Sobic007G124500--Sobic001G509200 Sobic007G124500--Sobic010G100900 Sobic007G124500--Sobic002G351200 Sobic004G103300 Sobic004G103300 Sobic007G124500--Sobic004G103300 Sobic010G231500 Sobic010G231500 Sobic007G124500--Sobic010G231500 Sobic001G393300 Sobic001G393300 Sobic007G124500--Sobic001G393300 Sobic003G304300--Sobic004G267700 Sobic006G191500 Sobic006G191500 Sobic003G304300--Sobic006G191500 Sobic003G304300--Sobic002G351200 Sobic002G161400 Sobic002G161400 Sobic003G304300--Sobic002G161400 Sobic004G344600 Sobic004G344600 Sobic003G304300--Sobic004G344600 Sobic001G112900 Sobic001G112900 Sobic003G304300--Sobic001G112900 Sobic003G304300--Sobic003G186800 Sobic003G304300--Sobic003G380200 Sobic003G304300--Sobic004G268400
Octagon: transcription factors


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