Gene annotation
Transcriptome id Sobic.003G188200.1
Synonym Sb03g025300, ATNRT2.5, NRT2.5
Functional annotation transporter, major facilitator family, putative, expressed
UniProt A0A1W0VY21
Pfam PF07690
Panther DB PTHR23515 PTHR23515:SF5
NCBI CDD -
KEGG Orthology K02575; NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G12940 : nitrate transporter2.5
RAP-DB (Rice) LOC_Os01g36720.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a028778 , Zm00025a034675
Brachypodium KQK08252
Barley HORVU7Hr1G098550.4 , HORVU7Hr1G098550.2 , HORVU7Hr1G098550.3 , HORVU7Hr1G098550.1
Wheat TraesCS7D02G420900 , TraesCS7B02G328700 , TraesCS7A02G428500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -
2 Sobic.002G052100 early light-induced protein, chloroplast precursor, putative, expressed -
3 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.003G326000 nucleotide pyrophosphatase/phosphodiesterase, putative, expressed -
5 Sobic.005G002400 expressed protein -
6 Sobic.001G181100 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@SCARECROW, putative, expressed -
7 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
8 Sobic.004G323400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed -
9 Sobic.008G002400 expressed protein -
10 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
11 Sobic.010G271800 leucine zipper protein-like, putative, expressed -
12 Sobic.004G214800 receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.006G020300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
14 Sobic.003G175800 - -
15 Sobic.001G112900 expressed protein -
16 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
17 Sobic.003G154400 OsSCP3 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
18 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
19 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
20 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic003G188200 Sobic003G188200 Sobic002G052000 Sobic002G052000 Sobic003G188200--Sobic002G052000 Sobic002G052100 Sobic002G052100 Sobic003G188200--Sobic002G052100 Sobic003G440300 Sobic003G440300 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic005G002400 Sobic005G002400 Sobic003G188200--Sobic005G002400 Sobic001G181100 Sobic001G181100 Sobic003G188200--Sobic001G181100 Sobic004G190100 Sobic004G190100 Sobic003G188200--Sobic004G190100 Sobic004G323400 Sobic004G323400 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic002G052000--Sobic002G052100 Sobic002G052000--Sobic001G181100 Sobic002G052000--Sobic003G188200 Sobic003G175800 Sobic003G175800 Sobic002G052000--Sobic003G175800 Sobic003G154400 Sobic003G154400 Sobic002G052000--Sobic003G154400 Sobic004G214800 Sobic004G214800 Sobic002G052000--Sobic004G214800 Sobic002G052000--Sobic005G002400 Sobic007G163433 Sobic007G163433 Sobic002G052000--Sobic007G163433 Sobic010G271800 Sobic010G271800 Sobic002G052000--Sobic010G271800 Sobic002G052100--Sobic002G052000 Sobic002G052100--Sobic001G181100 Sobic002G052100--Sobic004G214800 Sobic002G052100--Sobic005G002400 Sobic002G052100--Sobic003G175800 Sobic002G052100--Sobic003G154400 Sobic006G020300 Sobic006G020300 Sobic002G052100--Sobic006G020300 Sobic002G052100--Sobic003G326000 Sobic002G052100--Sobic010G271800 Sobic003G440300--Sobic004G190100 Sobic003G162400 Sobic003G162400 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G440300--Sobic003G188200 Sobic002G291800 Sobic002G291800 Sobic003G440300--Sobic002G291800 Sobic001G112900 Sobic001G112900 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic006G154800 Sobic006G154800 Sobic003G440300--Sobic006G154800 Sobic003G440300--Sobic004G323400 Sobic003G326000--Sobic010G271800 Sobic003G326000--Sobic005G002400 Sobic003G326000--Sobic004G214800 Sobic003G326000--Sobic008G002400 Sobic003G326000--Sobic001G181100 Sobic003G326000--Sobic002G052100 Sobic003G326000--Sobic004G190100 Sobic003G326000--Sobic001G112900 Sobic003G326000--Sobic006G154800 Sobic005G002400--Sobic008G002400 Sobic005G002400--Sobic003G326000 Sobic005G002400--Sobic001G112900 Sobic005G002400--Sobic001G181100 Sobic005G002400--Sobic002G052100 Sobic005G002400--Sobic004G190100 Sobic005G002400--Sobic010G271800 Sobic005G002400--Sobic006G020300 Sobic005G002400--Sobic003G154400 Sobic001G181100--Sobic002G052100 Sobic001G181100--Sobic005G002400 Sobic001G181100--Sobic003G326000 Sobic001G181100--Sobic010G271800 Sobic001G181100--Sobic004G214800 Sobic001G181100--Sobic002G052000 Sobic001G181100--Sobic003G175800 Sobic001G181100--Sobic008G002400 Sobic001G181100--Sobic006G020300 Sobic004G190100--Sobic005G002400 Sobic004G190100--Sobic003G440300 Sobic004G190100--Sobic003G326000 Sobic004G190100--Sobic008G002400 Sobic004G190100--Sobic001G112900 Sobic004G190100--Sobic010G271800 Sobic010G223200 Sobic010G223200 Sobic004G190100--Sobic010G223200 Sobic004G190100--Sobic003G162400 Sobic004G190100--Sobic006G154800 Sobic002G417300 Sobic002G417300 Sobic004G323400--Sobic002G417300 Sobic002G295100 Sobic002G295100 Sobic004G323400--Sobic002G295100 Sobic004G323400--Sobic003G188200 Sobic001G104900 Sobic001G104900 Sobic004G323400--Sobic001G104900 Sobic004G323400--Sobic003G440300 Sobic003G425300 Sobic003G425300 Sobic004G323400--Sobic003G425300 Sobic006G041000 Sobic006G041000 Sobic004G323400--Sobic006G041000 Sobic004G282900 Sobic004G282900 Sobic004G323400--Sobic004G282900 Sobic004G323400--Sobic002G291800 Sobic008G002400--Sobic005G002400 Sobic008G002400--Sobic003G326000 Sobic008G002400--Sobic001G181100 Sobic008G002400--Sobic010G271800 Sobic008G002400--Sobic006G020300 Sobic008G002400--Sobic001G112900 Sobic007G016600 Sobic007G016600 Sobic008G002400--Sobic007G016600 Sobic008G002400--Sobic004G190100 Sobic010G113200 Sobic010G113200 Sobic008G002400--Sobic010G113200
Octagon: transcription factors


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