Gene annotation
Transcriptome id Sobic.004G323400.1
Synonym Sb04g035350
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
serine esterase family protein, putative, expressed
UniProt A0A194YTR8
Pfam PF05057
Panther DB PTHR12482 PTHR12482:SF15
NCBI CDD KOG4372; Predicted alpha/beta hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25770 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os02g54580.1 : serine esterase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a022398
Brachypodium KQK01067
Barley -
Wheat TraesCS6A02G346200 , TraesCS6B02G379700 , TraesCS6D02G329100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G417300 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
2 Sobic.002G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed K00327: NADPH-ferrihemoprotein reductase
3 Sobic.003G188200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
4 Sobic.001G104900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@peptidase, M50 family, putative, expressed -
5 Sobic.003G440300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G425300 Phycoerythrobilin ferredoxin oxidoreductase(PubMedID : 24906815)@phycoerythrobilin ferredoxin oxidoreductase, putative, expressed K08101: phytochromobilin:ferredoxin oxidoreductase
7 Sobic.006G041000 "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed -
8 Sobic.004G282900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized membrane protein, putative, expressed -
9 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
10 Sobic.002G213400 expressed protein -
11 Sobic.005G132000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@auxin response factor, putative, expressed -
12 Sobic.009G245000 Glucose-1-phosphate adenylyltransferase large subunit(PubMedID : 26186930)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed K00975: glucose-1-phosphate adenylyltransferase
13 Sobic.009G040400 WD domain, G-beta repeat domain containing protein, expressed K11801: DDB1- and CUL4-associated factor 11
14 Sobic.003G162400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
16 Sobic.003G426900 proline synthetase co-transcribed bacterial homolog protein, putative, expressed K06997: yggS, PLP dependent protein
17 Sobic.004G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF19 - conserved peptide uORF-containing transcript, expressed -
18 Sobic.009G259100 CCT motif family protein, expressed -
19 Sobic.009G225600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
20 Sobic.002G052000 early light-induced protein, chloroplast precursor, putative, expressed -


Gene co-expression network
sample Sobic004G323400 Sobic004G323400 Sobic002G417300 Sobic002G417300 Sobic004G323400--Sobic002G417300 Sobic002G295100 Sobic002G295100 Sobic004G323400--Sobic002G295100 Sobic003G188200 Sobic003G188200 Sobic004G323400--Sobic003G188200 Sobic001G104900 Sobic001G104900 Sobic004G323400--Sobic001G104900 Sobic003G440300 Sobic003G440300 Sobic004G323400--Sobic003G440300 Sobic003G425300 Sobic003G425300 Sobic004G323400--Sobic003G425300 Sobic006G041000 Sobic006G041000 Sobic004G323400--Sobic006G041000 Sobic004G282900 Sobic004G282900 Sobic004G323400--Sobic004G282900 Sobic002G291800 Sobic002G291800 Sobic004G323400--Sobic002G291800 Sobic002G417300--Sobic004G323400 Sobic003G339700 Sobic003G339700 Sobic002G417300--Sobic003G339700 Sobic007G146400 Sobic007G146400 Sobic002G417300--Sobic007G146400 Sobic001G160800 Sobic001G160800 Sobic002G417300--Sobic001G160800 Sobic002G417300--Sobic003G425300 Sobic002G275100 Sobic002G275100 Sobic002G417300--Sobic002G275100 Sobic002G417300--Sobic002G295100 Sobic007G121300 Sobic007G121300 Sobic002G417300--Sobic007G121300 Sobic004G189200 Sobic004G189200 Sobic002G417300--Sobic004G189200 Sobic002G295100--Sobic004G323400 Sobic001G331600 Sobic001G331600 Sobic002G295100--Sobic001G331600 Sobic001G485100 Sobic001G485100 Sobic002G295100--Sobic001G485100 Sobic002G293500 Sobic002G293500 Sobic002G295100--Sobic002G293500 Sobic004G312600 Sobic004G312600 Sobic002G295100--Sobic004G312600 Sobic001G046000 Sobic001G046000 Sobic002G295100--Sobic001G046000 Sobic009G225600 Sobic009G225600 Sobic002G295100--Sobic009G225600 Sobic006G257800 Sobic006G257800 Sobic002G295100--Sobic006G257800 Sobic003G162400 Sobic003G162400 Sobic002G295100--Sobic003G162400 Sobic002G052000 Sobic002G052000 Sobic003G188200--Sobic002G052000 Sobic002G052100 Sobic002G052100 Sobic003G188200--Sobic002G052100 Sobic003G188200--Sobic003G440300 Sobic003G326000 Sobic003G326000 Sobic003G188200--Sobic003G326000 Sobic005G002400 Sobic005G002400 Sobic003G188200--Sobic005G002400 Sobic001G181100 Sobic001G181100 Sobic003G188200--Sobic001G181100 Sobic004G190100 Sobic004G190100 Sobic003G188200--Sobic004G190100 Sobic003G188200--Sobic004G323400 Sobic008G002400 Sobic008G002400 Sobic003G188200--Sobic008G002400 Sobic002G338800 Sobic002G338800 Sobic001G104900--Sobic002G338800 Sobic001G104900--Sobic004G323400 Sobic009G245000 Sobic009G245000 Sobic001G104900--Sobic009G245000 Sobic001G112900 Sobic001G112900 Sobic001G104900--Sobic001G112900 Sobic001G313000 Sobic001G313000 Sobic001G104900--Sobic001G313000 Sobic001G104900--Sobic006G041000 Sobic001G104900--Sobic002G052000 Sobic001G104900--Sobic002G295100 Sobic003G186800 Sobic003G186800 Sobic001G104900--Sobic003G186800 Sobic003G440300--Sobic004G190100 Sobic003G440300--Sobic003G162400 Sobic003G440300--Sobic003G326000 Sobic003G440300--Sobic003G188200 Sobic003G440300--Sobic002G291800 Sobic003G440300--Sobic001G112900 Sobic003G440300--Sobic005G002400 Sobic006G154800 Sobic006G154800 Sobic003G440300--Sobic006G154800 Sobic003G440300--Sobic004G323400 Sobic003G425300--Sobic004G323400 Sobic003G425300--Sobic002G417300 Sobic003G425300--Sobic002G295100 Sobic003G373600 Sobic003G373600 Sobic003G425300--Sobic003G373600 Sobic005G132000 Sobic005G132000 Sobic003G425300--Sobic005G132000 Sobic003G277400 Sobic003G277400 Sobic003G425300--Sobic003G277400 Sobic003G426900 Sobic003G426900 Sobic003G425300--Sobic003G426900 Sobic003G428600 Sobic003G428600 Sobic003G425300--Sobic003G428600 Sobic003G425300--Sobic003G440300 Sobic009G259100 Sobic009G259100 Sobic006G041000--Sobic009G259100 Sobic006G041000--Sobic004G190100 Sobic006G041000--Sobic001G112900 Sobic006G041000--Sobic003G440300 Sobic004G267700 Sobic004G267700 Sobic006G041000--Sobic004G267700 Sobic002G351200 Sobic002G351200 Sobic006G041000--Sobic002G351200 Sobic002G213400 Sobic002G213400 Sobic006G041000--Sobic002G213400 Sobic006G041000--Sobic007G121300 Sobic003G304300 Sobic003G304300 Sobic006G041000--Sobic003G304300 Sobic004G282900--Sobic002G052000 Sobic004G282900--Sobic003G188200 Sobic004G282900--Sobic004G323400 Sobic004G282900--Sobic009G245000 Sobic004G282900--Sobic002G052100 Sobic004G282900--Sobic001G181100 Sobic004G282900--Sobic001G104900 Sobic004G282900--Sobic005G002400 Sobic004G282900--Sobic002G338800 Sobic010G223200 Sobic010G223200 Sobic002G291800--Sobic010G223200 Sobic008G167600 Sobic008G167600 Sobic002G291800--Sobic008G167600 Sobic002G291800--Sobic003G162400 Sobic006G235300 Sobic006G235300 Sobic002G291800--Sobic006G235300 Sobic002G291800--Sobic003G440300 Sobic004G127800 Sobic004G127800 Sobic002G291800--Sobic004G127800 Sobic002G291800--Sobic004G190100 Sobic002G291800--Sobic002G275100 Sobic002G291800--Sobic001G112900
Octagon: transcription factors


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