Gene annotation
| Transcriptome id | Sobic.002G417300.1,Sobic.002G417300.2 |
|---|---|
| Synonym | CIPK10, PKS2, CBL-interacting protein kinases, SNRK3.8, Sb02g042920, SbCIPK25, SIP1 |
| Functional annotation | Interacting factor of CBLs (PubMedID : 19860013) CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| UniProt | A0A1B6QG91 , C4P7S6 , C4P7S7 |
| Pfam | PF14531 PF03822 |
| Panther DB | PTHR24347 PTHR24347:SF259 |
| NCBI CDD | KOG0583; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0007165; signal transduction |
Orthologs (automatic annotation)
| TAIR | AT5G58380 : SOS3-interacting protein 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os07g48100.1 : CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| MaizeGDB (Corn) | Zm00025a049150 , Zm00025a015440 |
| Brachypodium | KQK14651 |
| Barley | HORVU2Hr1G018260.1 , HORVU2Hr1G018260.3 , HORVU2Hr1G018260.2 , HORVU2Hr1G018260.4 |
| Wheat | - |
| Populus | PNT08521 |
JBrowse
| Sobic.002G417300 |
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G323400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine esterase family protein, putative, expressed | - |
| 2 | Sobic.003G339700 | Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.12 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 3 | Sobic.007G146400 | chaperonin Cpn60/TCP-1, putative, expressed | K00921: PIKFYVE, 1-phosphatidylinositol-3-phosphate 5-kinase |
| 4 | Sobic.001G160800 | integral membrane protein DUF6 containing protein, expressed | - |
| 5 | Sobic.003G425300 | Phycoerythrobilin ferredoxin oxidoreductase(PubMedID : 24906815)@phycoerythrobilin ferredoxin oxidoreductase, putative, expressed | K08101: phytochromobilin:ferredoxin oxidoreductase |
| 6 | Sobic.002G275100 | response regulator receiver domain containing protein, expressed | K12130: pseudo-response regulator 5 |
| 7 | Sobic.002G295100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADPH reductase, putative, expressed | K00327: NADPH-ferrihemoprotein reductase |
| 8 | Sobic.007G121300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@cleavage and polyadenylation specificity factor subunit 5, putative, expressed | K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5 |
| 9 | Sobic.004G189200 | OsFBK9 - F-box domain and kelch repeat containing protein, expressed | - |
| 10 | Sobic.002G291800 | phosphate carrier protein, mitochondrial precursor, putative, expressed | K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3 |
| 11 | Sobic.006G041000 | "Oxidoreductase, zinc-binding dehydrogenase family protein"("PubMedID : 26759170,PubMedID : 24597475")@dehydrogenase, putative, expressed | - |
| 12 | Sobic.009G259100 | CCT motif family protein, expressed | - |
| 13 | Sobic.009G069300 | actin binding protein family(PubMedID : 26465154)@AR791, putative, expressed | - |
| 14 | Sobic.003G188200 | transporter, major facilitator family, putative, expressed | K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter |
| 15 | Sobic.003G440300 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein | - |
| 16 | Sobic.008G167600 | VTC2, putative, expressed | - |
| 17 | Sobic.002G213400 | expressed protein | - |
| 18 | Sobic.006G257800 | actin-6, putative, expressed | K16616: actin-related protein 8, plant |
| 19 | Sobic.010G090301 | - | - |
| 20 | Sobic.009G183101 | - | - |
Gene co-expression network
Octagon: transcription factors
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