Gene annotation
Transcriptome id Sobic.004G189200.1
Synonym Sb04g023750
Functional annotation OsFBK9 - F-box domain and kelch repeat containing protein, expressed
UniProt C5XVN8
Pfam PF00646 PF01344
Panther DB PTHR24414 PTHR24414:SF33
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G22040 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os02g36520.1 : OsFBK9 - F-box domain and kelch repeat containing protein, expressed
MaizeGDB (Corn) Zm00025a031709
Brachypodium KQK00009
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G257800 actin-6, putative, expressed K16616: actin-related protein 8, plant
2 Sobic.001G062300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aldehyde oxidase, putative, expressed K11817: indole-3-acetaldehyde oxidase
3 Sobic.006G051800 calmodulin-binding transcription activator 4, putative, expressed -
4 Sobic.008G167600 VTC2, putative, expressed -
5 Sobic.007G190000 expressed protein -
6 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
7 Sobic.003G301500 haloacid dehalogenase-like hydrolase domain-containing protein 1A, putative, expressed K17623: PUDP, pseudouridine 5'-phosphatase
8 Sobic.002G383600 zinc finger, C3HC4 type domain containing protein, expressed K12169: KPC1, Kip1 ubiquitination-promoting complex protein 1
9 Sobic.004G179300 chloride channel protein, putative, expressed K05016: chloride channel 7
10 Sobic.002G291800 phosphate carrier protein, mitochondrial precursor, putative, expressed K15102: SLC25A3, PHC, solute carrier family 25 (mitochondrial phosphate transporter), member 3
11 Sobic.006G275100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K15119: solute carrier family 25, member 39/40
12 Sobic.004G006800 expressed protein -
13 Sobic.009G074400 CK1_CaseinKinase_1a.5 - CK1 includes the casein kinase 1 kinases, expressed -
14 Sobic.004G103000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@spotted leaf 11, putative, expressed -
15 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
16 Sobic.001G446850 - -
17 Sobic.010G074300 smr domain containing protein, expressed -
18 Sobic.002G379750 - -
19 Sobic.002G417300 Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.31 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.010G223200 OsFtsH2 FtsH protease, homologue of AtFtsH2/8, expressed K03798: ftsH, cell division protease FtsH


Gene co-expression network
sample Sobic004G189200 Sobic004G189200 Sobic006G257800 Sobic006G257800 Sobic004G189200--Sobic006G257800 Sobic001G062300 Sobic001G062300 Sobic004G189200--Sobic001G062300 Sobic006G051800 Sobic006G051800 Sobic004G189200--Sobic006G051800 Sobic008G167600 Sobic008G167600 Sobic004G189200--Sobic008G167600 Sobic007G190000 Sobic007G190000 Sobic004G189200--Sobic007G190000 Sobic004G231900 Sobic004G231900 Sobic004G189200--Sobic004G231900 Sobic003G301500 Sobic003G301500 Sobic004G189200--Sobic003G301500 Sobic002G383600 Sobic002G383600 Sobic004G189200--Sobic002G383600 Sobic004G179300 Sobic004G179300 Sobic004G189200--Sobic004G179300 Sobic006G257800--Sobic008G167600 Sobic006G257800--Sobic004G189200 Sobic003G198800 Sobic003G198800 Sobic006G257800--Sobic003G198800 Sobic006G257800--Sobic002G383600 Sobic006G257800--Sobic001G062300 Sobic010G177400 Sobic010G177400 Sobic006G257800--Sobic010G177400 Sobic002G295100 Sobic002G295100 Sobic006G257800--Sobic002G295100 Sobic006G257800--Sobic006G051800 Sobic002G341000 Sobic002G341000 Sobic006G257800--Sobic002G341000 Sobic001G062300--Sobic006G257800 Sobic001G062300--Sobic004G189200 Sobic006G275100 Sobic006G275100 Sobic001G062300--Sobic006G275100 Sobic001G062300--Sobic008G167600 Sobic001G062300--Sobic007G190000 Sobic004G211866 Sobic004G211866 Sobic001G062300--Sobic004G211866 Sobic001G062300--Sobic003G301500 Sobic010G272800 Sobic010G272800 Sobic001G062300--Sobic010G272800 Sobic001G062300--Sobic002G383600 Sobic003G029500 Sobic003G029500 Sobic006G051800--Sobic003G029500 Sobic009G074400 Sobic009G074400 Sobic006G051800--Sobic009G074400 Sobic006G051800--Sobic004G231900 Sobic006G051800--Sobic002G383600 Sobic006G219600 Sobic006G219600 Sobic006G051800--Sobic006G219600 Sobic006G051800--Sobic004G189200 Sobic006G051800--Sobic006G257800 Sobic005G201000 Sobic005G201000 Sobic006G051800--Sobic005G201000 Sobic006G051800--Sobic008G167600 Sobic008G167600--Sobic006G257800 Sobic004G151300 Sobic004G151300 Sobic008G167600--Sobic004G151300 Sobic002G291800 Sobic002G291800 Sobic008G167600--Sobic002G291800 Sobic004G312600 Sobic004G312600 Sobic008G167600--Sobic004G312600 Sobic004G127800 Sobic004G127800 Sobic008G167600--Sobic004G127800 Sobic002G293500 Sobic002G293500 Sobic008G167600--Sobic002G293500 Sobic002G081400 Sobic002G081400 Sobic008G167600--Sobic002G081400 Sobic006G090100 Sobic006G090100 Sobic008G167600--Sobic006G090100 Sobic001G333800 Sobic001G333800 Sobic008G167600--Sobic001G333800 Sobic010G074300 Sobic010G074300 Sobic007G190000--Sobic010G074300 Sobic007G190000--Sobic004G179300 Sobic003G372500 Sobic003G372500 Sobic007G190000--Sobic003G372500 Sobic010G227100 Sobic010G227100 Sobic007G190000--Sobic010G227100 Sobic002G146300 Sobic002G146300 Sobic007G190000--Sobic002G146300 Sobic010G020800 Sobic010G020800 Sobic007G190000--Sobic010G020800 Sobic007G190000--Sobic009G074400 Sobic010G147100 Sobic010G147100 Sobic007G190000--Sobic010G147100 Sobic007G190000--Sobic004G189200 Sobic004G231900--Sobic006G219600 Sobic004G231900--Sobic006G051800 Sobic004G231900--Sobic009G074400 Sobic004G146600 Sobic004G146600 Sobic004G231900--Sobic004G146600 Sobic004G231900--Sobic008G167600 Sobic004G001500 Sobic004G001500 Sobic004G231900--Sobic004G001500 Sobic001G446850 Sobic001G446850 Sobic004G231900--Sobic001G446850 Sobic004G231900--Sobic004G189200 Sobic004G231900--Sobic004G312600 Sobic003G301500--Sobic004G189200 Sobic003G301500--Sobic008G167600 Sobic002G431500 Sobic002G431500 Sobic003G301500--Sobic002G431500 Sobic003G301500--Sobic001G062300 Sobic003G301500--Sobic010G272800 Sobic010G223200 Sobic010G223200 Sobic003G301500--Sobic010G223200 Sobic003G301500--Sobic010G020800 Sobic003G301500--Sobic002G291800 Sobic007G006200 Sobic007G006200 Sobic003G301500--Sobic007G006200 Sobic002G383600--Sobic006G257800 Sobic002G383600--Sobic010G227100 Sobic002G383600--Sobic006G051800 Sobic002G383600--Sobic009G074400 Sobic002G383600--Sobic004G001500 Sobic003G107500 Sobic003G107500 Sobic002G383600--Sobic003G107500 Sobic002G383600--Sobic004G189200 Sobic002G383600--Sobic006G275100 Sobic002G383600--Sobic007G190000 Sobic002G386100 Sobic002G386100 Sobic004G179300--Sobic002G386100 Sobic004G179300--Sobic007G190000 Sobic002G128200 Sobic002G128200 Sobic004G179300--Sobic002G128200 Sobic004G179300--Sobic004G189200 Sobic006G002300 Sobic006G002300 Sobic004G179300--Sobic006G002300 Sobic002G187700 Sobic002G187700 Sobic004G179300--Sobic002G187700 Sobic001G476700 Sobic001G476700 Sobic004G179300--Sobic001G476700 Sobic003G301900 Sobic003G301900 Sobic004G179300--Sobic003G301900 Sobic004G179300--Sobic010G020800
Octagon: transcription factors


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