Gene annotation
Transcriptome id Sobic.004G006800.1
Synonym Sb04g000790
Functional annotation expressed protein
UniProt A0A1Z5RKA9
Pfam -
Panther DB PTHR35694 PTHR35694:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G28530 : -
RAP-DB (Rice) LOC_Os02g01970.1 : expressed protein
MaizeGDB (Corn) Zm00025a018665
Brachypodium KQJ92850
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G006800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G379750 - -
2 Sobic.004G127800 AGC_PKA/PKG_like.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.006G235300 expressed protein -
4 Sobic.003G160100 - -
5 Sobic.006G065100 ERD1 protein, chloroplast precursor, putative, expressed K03696: ATP-dependent Clp protease ATP-binding subunit ClpC
6 Sobic.004G322600 Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain(PubMedID : 26465154)@protein kinase domain containing protein, expressed -
7 Sobic.001G077300 thioredoxin, putative, expressed -
8 Sobic.009G194500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.002G119100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@integral membrane transporter family protein, putative, expressed -
10 Sobic.006G259600 methylthioribose kinase, putative, expressed K00899: 5-methylthioribose kinase
11 Sobic.009G093100 OsAGSW1(Ortholog in rice:Li and Li 2015)(PubMedID : 31659923)@ ELMO/CED-12 family protein, putative, expressed -
12 Sobic.001G352400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G312600 COP1, putative, expressed K10143: RFWD2, E3 ubiquitin-protein ligase RFWD2
14 Sobic.006G235400 ELMO/CED-12 family protein, putative, expressed K08869: ADCK, aarF domain-containing kinase
15 Sobic.007G227100 expressed protein -
16 Sobic.005G095000 -(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
17 Sobic.006G243800 OsWAK55 - OsWAK receptor-like protein kinase, expressed -
18 Sobic.004G231900 ribonuclease protein, putative, expressed K18758: DIS3-like exonuclease 2
19 Sobic.004G189200 OsFBK9 - F-box domain and kelch repeat containing protein, expressed -
20 Sobic.006G212800 expressed protein -


Gene co-expression network
sample Sobic004G006800 Sobic004G006800 Sobic002G379750 Sobic002G379750 Sobic004G006800--Sobic002G379750 Sobic004G127800 Sobic004G127800 Sobic004G006800--Sobic004G127800 Sobic006G235300 Sobic006G235300 Sobic004G006800--Sobic006G235300 Sobic003G160100 Sobic003G160100 Sobic004G006800--Sobic003G160100 Sobic006G065100 Sobic006G065100 Sobic004G006800--Sobic006G065100 Sobic004G322600 Sobic004G322600 Sobic004G006800--Sobic004G322600 Sobic001G077300 Sobic001G077300 Sobic004G006800--Sobic001G077300 Sobic009G194500 Sobic009G194500 Sobic004G006800--Sobic009G194500 Sobic002G119100 Sobic002G119100 Sobic004G006800--Sobic002G119100 Sobic002G379750--Sobic004G006800 Sobic002G379750--Sobic004G127800 Sobic002G379750--Sobic003G160100 Sobic002G124600 Sobic002G124600 Sobic002G379750--Sobic002G124600 Sobic002G379750--Sobic006G235300 Sobic002G379750--Sobic006G065100 Sobic005G095000 Sobic005G095000 Sobic002G379750--Sobic005G095000 Sobic004G312600 Sobic004G312600 Sobic002G379750--Sobic004G312600 Sobic006G219600 Sobic006G219600 Sobic002G379750--Sobic006G219600 Sobic007G227100 Sobic007G227100 Sobic004G127800--Sobic007G227100 Sobic004G127800--Sobic001G077300 Sobic004G127800--Sobic006G235300 Sobic004G127800--Sobic004G312600 Sobic006G235400 Sobic006G235400 Sobic004G127800--Sobic006G235400 Sobic006G090100 Sobic006G090100 Sobic004G127800--Sobic006G090100 Sobic001G331600 Sobic001G331600 Sobic004G127800--Sobic001G331600 Sobic006G191500 Sobic006G191500 Sobic004G127800--Sobic006G191500 Sobic009G073900 Sobic009G073900 Sobic004G127800--Sobic009G073900 Sobic006G235300--Sobic004G127800 Sobic006G235300--Sobic006G235400 Sobic002G161400 Sobic002G161400 Sobic006G235300--Sobic002G161400 Sobic006G235300--Sobic001G077300 Sobic006G235300--Sobic006G191500 Sobic004G128900 Sobic004G128900 Sobic006G235300--Sobic004G128900 Sobic006G235300--Sobic009G194500 Sobic003G380200 Sobic003G380200 Sobic006G235300--Sobic003G380200 Sobic006G235300--Sobic007G227100 Sobic003G160100--Sobic005G095000 Sobic004G086150 Sobic004G086150 Sobic003G160100--Sobic004G086150 Sobic003G160100--Sobic004G006800 Sobic009G248801 Sobic009G248801 Sobic003G160100--Sobic009G248801 Sobic002G244200 Sobic002G244200 Sobic003G160100--Sobic002G244200 Sobic003G160100--Sobic002G379750 Sobic007G090403 Sobic007G090403 Sobic003G160100--Sobic007G090403 Sobic005G133600 Sobic005G133600 Sobic003G160100--Sobic005G133600 Sobic007G133000 Sobic007G133000 Sobic003G160100--Sobic007G133000 Sobic009G093100 Sobic009G093100 Sobic006G065100--Sobic009G093100 Sobic006G065100--Sobic001G077300 Sobic006G065100--Sobic004G127800 Sobic003G073800 Sobic003G073800 Sobic006G065100--Sobic003G073800 Sobic001G378100 Sobic001G378100 Sobic006G065100--Sobic001G378100 Sobic006G065100--Sobic006G090100 Sobic002G081400 Sobic002G081400 Sobic006G065100--Sobic002G081400 Sobic005G179300 Sobic005G179300 Sobic006G065100--Sobic005G179300 Sobic001G333800 Sobic001G333800 Sobic006G065100--Sobic001G333800 Sobic004G322700 Sobic004G322700 Sobic004G322600--Sobic004G322700 Sobic004G322600--Sobic002G119100 Sobic006G161500 Sobic006G161500 Sobic004G322600--Sobic006G161500 Sobic004G322600--Sobic009G194500 Sobic004G035100 Sobic004G035100 Sobic004G322600--Sobic004G035100 Sobic008G038500 Sobic008G038500 Sobic004G322600--Sobic008G038500 Sobic004G322600--Sobic001G331600 Sobic004G322600--Sobic007G227100 Sobic001G244600 Sobic001G244600 Sobic004G322600--Sobic001G244600 Sobic001G077300--Sobic009G073900 Sobic001G077300--Sobic006G090100 Sobic001G077300--Sobic006G235400 Sobic001G077300--Sobic004G127800 Sobic001G359300 Sobic001G359300 Sobic001G077300--Sobic001G359300 Sobic001G077300--Sobic009G093100 Sobic003G341300 Sobic003G341300 Sobic001G077300--Sobic003G341300 Sobic006G212800 Sobic006G212800 Sobic001G077300--Sobic006G212800 Sobic003G003450 Sobic003G003450 Sobic001G077300--Sobic003G003450 Sobic009G194500--Sobic002G119100 Sobic009G194500--Sobic006G161500 Sobic010G231300 Sobic010G231300 Sobic009G194500--Sobic010G231300 Sobic009G194500--Sobic004G322600 Sobic009G194500--Sobic008G038500 Sobic003G314000 Sobic003G314000 Sobic009G194500--Sobic003G314000 Sobic007G140700 Sobic007G140700 Sobic009G194500--Sobic007G140700 Sobic009G194500--Sobic004G127800 Sobic009G194500--Sobic006G235400 Sobic002G119100--Sobic009G194500 Sobic002G119100--Sobic004G322600 Sobic002G119100--Sobic006G161500 Sobic002G119100--Sobic008G038500 Sobic002G119100--Sobic004G127800 Sobic002G119100--Sobic001G244600 Sobic002G119100--Sobic004G322700 Sobic002G119100--Sobic007G227100 Sobic002G293500 Sobic002G293500 Sobic002G119100--Sobic002G293500
Octagon: transcription factors


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